KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:51 2014 Check: 00 .. Name: ENSP00000261024/1-571 Len: 640 Check: 8932 Weight: 1.00 Name: ENSBTAP00000045304/1-574 Len: 640 Check: 6635 Weight: 1.00 Name: bmy_08050T0/1-615 Len: 640 Check: 8575 Weight: 1.00 Name: BACU017031/1-553 Len: 640 Check: 3768 Weight: 1.00 Name: ENSTTRP00000004858/1-574 Len: 640 Check: 8515 Weight: 1.00 // 1 50 ENSP00000261024/1-571 MTRAG----D HNRQRG---- --CCGSLADY LTSAKFLLYL GHSLST---- ENSBTAP00000045304/1-574 MTRTR----E QSRQGG---- --CCGSLANY LTSAKFLLYL GHSLST---- bmy_08050T0/1-615 MCRIQSPGFE EIEKGKSSSG AFCTELLCFQ RCSLQFLALL LTSTSAGAAA BACU017031/1-553 MCRIQSPGFE EIEKGK---- ---------- ---------- ---------- ENSTTRP00000004858/1-574 MTRAR----E QNRLGR---- --CCGSLANY LTSAKFLLYL GHSLST---- 51 100 ENSP00000261024/1-571 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045304/1-574 ---------- ---------- ---------- ---------- ---------- bmy_08050T0/1-615 VAAEEQAGGA WCHDQGKRAK PPGRMLWILS KLPDLCKIPS LPWSFSIYMG BACU017031/1-553 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000004858/1-574 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000261024/1-571 W-GDRMWHFA VSVFLVELYG NSLLLTAVYG LVVAGSVLVL GAIIGDWVDK ENSBTAP00000045304/1-574 W-GDRMWHFA VSVFLVELYG NSLLLTAVYG LVVAGSVLVL GAIIGDWVDK bmy_08050T0/1-615 WQGDRMWHFA VSVFLVELYG NSLLLTAVYG LVVAGSVLVL GAIIGDWVDK BACU017031/1-553 --GDRMWHFA VSVFLVELYG NSLLLTAVYG LVVAGSVLVL GAIIGDWVDK ENSTTRP00000004858/1-574 W-GDRMWHFA VSVFLVELYG NSLLLTAVYG LVVAGSVLVL GAIIGDWVDK 151 200 ENSP00000261024/1-571 NARLKVAQTS LVVQNVSVIL CGIILMMVFL HKHELLTMYH GWVLTSCYIL ENSBTAP00000045304/1-574 NARLKVAQTS LVIQNVSVIL CGIILMMVFL HKNELLTMYH GWVLTSCYIL bmy_08050T0/1-615 NARLKVAQTS LLIQNVSVIL CGIILMMVFL HKKELLTMYH GWVLNSENLT BACU017031/1-553 NARLKVAQTS LLIQNVSVIL CGIILMMVFL HKKELLTMYH GWVLTSCYIL ENSTTRP00000004858/1-574 NARLKVAQTS LVIQNVSVIL CGIILMMVFL HKKDLLTMYH GWVLTSCYIL 201 250 ENSP00000261024/1-571 IITIANIANL ASTATAITIQ RDWIVVVAGE DRSKLANMNA TIRRIDQLTN ENSBTAP00000045304/1-574 IITIANIANL ASTATAITIQ RDWIVVVAGG DRGRLADMNA TIRRIDQLTN bmy_08050T0/1-615 CDFISHTVDI ---------- ---------- ----ITNMNA TIRRIDQLTN BACU017031/1-553 IITIANIANL ASTATAITIQ RDWIVVVAGD DRSKLADMNA TIRRIDQLTN ENSTTRP00000004858/1-574 IITIANIANL ASTATAITIQ RDWIVVVAGN DRSKLADMNA TIRRIDQLTN 251 300 ENSP00000261024/1-571 ILAPMAVGQI MTFGSPVIGC GFISGWNLVS MCVEYVLLWK VYQKTPALAV ENSBTAP00000045304/1-574 ILAPMAVGQI MTFGSTVIGC GFISAWNLVS MCMEYFLLWK VYQKTPALAV bmy_08050T0/1-615 ILAPMAVGQI MTFGSPVIGC GFISGWNLVS MCVEYFLLWK VYQKTPALAV BACU017031/1-553 ILAPMAVGQI MTFGSPVIGC GFISGWNLVS MCVEYFLLWK VYQKTPALAV ENSTTRP00000004858/1-574 ILAPMAVGQI MTFGSPVIGC GFISGWNLVS MCVEYFLLWK VYQKTPALAV 301 350 ENSP00000261024/1-571 KAGLKEEETE LKQLNLHKDT EPKPLEGTHL MGVKDSNIHE LEHEQEPTCA ENSBTAP00000045304/1-574 KAPPK-EETE LKRLNLYKES EPKPLEGTHL MGEKDPDIHE LEHEQEPSCA bmy_08050T0/1-615 KAAPK-EETE LKQLNVYKET EPKPLEGTHL MGEKDPDVHE LEHEQELSCA BACU017031/1-553 KAAPK-EETE LKQLNVYKET EPKPLEGTHL MGEKDPDIHE LEHEQELSCA ENSTTRP00000004858/1-574 KAAPK-EETE LKQLNVYKET EPKSLEGTHL MGEKDPDIHE LEHEQELSCA 351 400 ENSP00000261024/1-571 SQMAEPFRTF RDGWVSYYNQ PVFLAGMGLA FLYMTVLGFD CITTGYAYTQ ENSBTAP00000045304/1-574 SQMAEPFRTF RDGWVSYYNQ SVFLAGMGLA FLYMTVLGFD CITTGYAYTQ bmy_08050T0/1-615 SQMAEPFRTF RDGWVSYYNQ PVFLAGMGLA FLYMTVLGFD CITTGYAYTQ BACU017031/1-553 SQMAEPFRTF RDGWVSYYNQ PVFLAGMGLA FLYMTVLGFD CITTGYAYTQ ENSTTRP00000004858/1-574 SQMAEPFRTF RDGWVSYYNQ PVFLAGMGLA FLYMTVLGFD CITTGYAYTQ 401 450 ENSP00000261024/1-571 GLSGSILSIL MGASAITGIM GTVAFTWLRR KCGLVRTGLI SGLAQLSCLI ENSBTAP00000045304/1-574 GLSGSILSIL MGASAITGIM GTVAFTWLRR RCGLVRTGLI SGLAQLSCLI bmy_08050T0/1-615 GLSGSILSIL MGASAVTGIM GTVAFTWLRR KCGLVRTGLI SGFAQLSCLI BACU017031/1-553 GLSGSILSIL MGASAVTGIM GTVAFTWLRR KCGLVRTGLI SGFAQLSCLI ENSTTRP00000004858/1-574 GLSGSILSIL MGASAVTGIM GTVAFTWLRH RYGLVRTGLI SGFAQLSCLI 451 500 ENSP00000261024/1-571 LCVISVFMPG SPLDLSVSPF EDIRSRFIQG E--SITPTKI PEI--TTEIY ENSBTAP00000045304/1-574 LCVISVFMPG SPLDLSVSPF EDIRTRFIQT EPLSVTPTKI PEIISTTDTH bmy_08050T0/1-615 LCMISVFMPG SPLDLSVSPF EDIRSRFIQT EPLSITPTKI SEIISTTDMH BACU017031/1-553 LCMISVFMPG SPLDLSVSPF EDIRSRFIQT EPLSITPTKI SEIISTTDIH ENSTTRP00000004858/1-574 LCVISVFMPG SPLDLSVSPF EDIRSRFIQT EPLSITPTKI SEIISTTDMH 501 550 ENSP00000261024/1-571 MSNGSNSANI VPETSPESVP IISVSLLFAG VIAARIGLWS FDLTVTQLLQ ENSBTAP00000045304/1-574 MSNGSVPASV VPEMSSKSVP IISVSLLFAG VIAARIGLWS FDLTVTQLLQ bmy_08050T0/1-615 MSNGSDPANI VPEMSPKSVP IISVSLLFAG VIAARIGLWS FDLTVTQLLQ BACU017031/1-553 MSNGSDPANI VPEMSPKSVP IISVSLLFAG VIAARIGLWS FDLTVTQLLQ ENSTTRP00000004858/1-574 MSNGSDPANI VPEMSPKSVP IISVSLLFAG VIAARIGLWS FDLTVTQLLQ 551 600 ENSP00000261024/1-571 ENVIESERGI INGVQNSMNY LLDLLHFIMV ILAPNPEAFG LLVLISVSFV ENSBTAP00000045304/1-574 ENVVESERGI INGVQNSMNY LLDLLHFIMV ILAPNPEAFG LLVLISVSFV bmy_08050T0/1-615 ENVVESERGI INGVQNSMNY LLDLLHFIMV ILAPNPEAFG LLVLISVSFV BACU017031/1-553 ENVVESERGI INGVQNSMNY LLDLLHFIMV ILAPNPEAFG LLVLISVSFV ENSTTRP00000004858/1-574 ENVVESERGI INGVQNSMNY LLDLLHFIMV ILAPNPEAFG LLVLISVSFV 601 650 ENSP00000261024/1-571 AMGHIMYFRF AQNTLGNKLF ACGPDAKEVR KENQANTSVV ENSBTAP00000045304/1-574 AMGHVMYFRF AQKTLGSQLF ACGHDDKEVT DADQANTSDV bmy_08050T0/1-615 AMGHIMYFRF AQKTLGSQLF VCGHGDKEVT DANQTNTSDV BACU017031/1-553 AMGHIMYFRF AQKTLGSQLF VCGHGDKEVT DANQTNTSDV ENSTTRP00000004858/1-574 AMGHIMYFRF AQKSLGSQLF VCGHSDKEVT DANQTNTSDV