KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:56:52 2014 Check: 00 .. Name: ENSP00000356687/1-1124 Len: 1132 Check: 4777 Weight: 1.00 Name: ENSBTAP00000045311/1-1126 Len: 1132 Check: 3567 Weight: 1.00 Name: bmy_20098T0/1-769 Len: 1132 Check: 8559 Weight: 1.00 Name: ENSTTRP00000008085/1-1126 Len: 1132 Check: 6036 Weight: 1.00 // 1 50 ENSP00000356687/1-1124 ---MSSYFWA QNESNRPDLL CGQPADYLVE EKHFTTLVCF IVVLGG-LLK ENSBTAP00000045311/1-1126 ---TNVSFWV QKEGNRPDLL CGRAADYTVG KGHFLILVWS TLVLGGRLLR bmy_20098T0/1-769 MAKANVSFWV QKEGNQPDLL CGRSADYMPT KGHFPILVCS TIVLGG-LLR ENSTTRP00000008085/1-1126 ---ANVSFWV QKEGNQTDLL CGRSADYMPT KEHFPILVCS TVVLGG-LLR 51 100 ENSP00000356687/1-1124 MCLKNCEVIV LTILSLSGFV IGHMAYNSVE VHQIVYPLLR TSSFSLYSYF ENSBTAP00000045311/1-1126 AFLKNSEVIV LTILSLFGFL IGQLAYNFVE MHQVVYPLLR TSSFSLYCYF bmy_20098T0/1-769 AFLKNSEVIV LTILSLVGFL IGQLAYNFVE MHQVVYPLLR TPSFSLYCYF ENSTTRP00000008085/1-1126 AFLKNSEVIV LMILSLVGFL IGQLAYNFVE MHQVVYPLLR TPSFSIYCYF 101 150 ENSP00000356687/1-1124 SPLIIFMVAL DVEFYTLKKM FWQVLLTGLI SFSTASIIIG YVVIKFNKDS ENSBTAP00000045311/1-1126 SPLIIFMAAL DVDFYILKNV FWQVFLTGLI SFATTFIIIG YVVLKFNKYS bmy_20098T0/1-769 SPLIIFMAAL DVDFYILKNV FWQVVLTGLI SFSTAFIVIG YVVLKFNKDS ENSTTRP00000008085/1-1126 SPLIIFMAAL NVDFYILKNV FWQVMLTGLI SFSTAFVVIG YVVLKFNKDS 151 200 ENSP00000356687/1-1124 WDLQSCLLFS ITLGIIDPLR SVNSLKTIGI SKIYIDLIRG ESLIICSIAS ENSBTAP00000045311/1-1126 WDLQSCLLFS MALGITDPIY SVNSLKTVGI SKMYTDIIRG ESMIICGFTS bmy_20098T0/1-769 WDLQSCLLFS MTLGITDPVH SVNSLKTIGI SKMYTDIIRG ESMIICGFTS ENSTTRP00000008085/1-1126 WDLQSCLLFS MTLGMTDPVH SVNSLKTIGI SKMYTDIIRG ESMIICGFTS 201 250 ENSP00000356687/1-1124 IFFGNFRGNR IHFSIFRDLH VGIELSYDIL GSIIFGYWCA KIIQCILADV ENSBTAP00000045311/1-1126 IFFAIFKTGI LQMSNFRELH VIMGLTLDIL GSIACGYWCA RIIQFILTDL bmy_20098T0/1-769 IFFGVFRSNI LSISSFRELH VIMGLXLDIL GSIICGYWCA RIIQFILTDL ENSTTRP00000008085/1-1126 IVFGVFRSSI LSISNYRXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 251 300 ENSP00000356687/1-1124 FSNMLTNIIL CFSMVYMTFY IVEFLGMSGT LALAAVGLNL DSLTFKPKIE ENSBTAP00000045311/1-1126 FSNTLTNIIF CISMVYMTFY IVEFWGMSGT VALATVGLNL DSLSFKPRIK bmy_20098T0/1-769 FSNTLTNIVL CISMVYLTFY IVEFLGMSGM VALVAVGLNL DSLSFKPRIE ENSTTRP00000008085/1-1126 XXXXXXXXXX XXXXXXXXXX XXEFLGMSGM VALVSVGLNL DSLSFKPRIE 301 350 ENSP00000356687/1-1124 LVITKFLRIF SSVYEHLIYA FFGIVIGCGE LSHYEFHTIP FIFILFTTVN ENSBTAP00000045311/1-1126 LIITKFLIMF SCIFQHLIYT FFGIVIGCGE VKYFQFHTVV FMFILFVTVN bmy_20098T0/1-769 LIITKFLIMF SCVYQHLIYT FFGIVIGCGE IKYFQFHTLV FMFILFATVN ENSTTRP00000008085/1-1126 LIITKFLMMF SSVYQHLIYT FFGIVIGCGE IKYLQFHTLV FMLILFATVN 351 400 ENSP00000356687/1-1124 LV-RLLTILL VSPILMHSNY EYNWRWGVVI TWSGIKGVFN LLWAPDVYNL ENSBTAP00000045311/1-1126 FVSRFVTVVL VSPILMHSSY EYNWRWGIVI AWSGIKGVFS LLFAPEVHNL bmy_20098T0/1-769 FV-RLLTVVL VSPILRHSIY EYNWRWGIVI AWSGIKGVFS LLLAPDIHNL ENSTTRP00000008085/1-1126 FV-RLLTVVL VSPILRHSNY EYNWRWGIVI AWSGIKGVFS LLLAPDVHNL 401 450 ENSP00000356687/1-1124 AERKVEVPQM FILYVQVISL LTMGINSYVM TQSARKLDLC VLSLPRQMIL ENSBTAP00000045311/1-1126 AEQRVESPQL FILYIQVISL MTLGINSYVM TRLAKTLDLC VLSIPRQMAM bmy_20098T0/1-769 AEQKVESPQL FILYVQVISL MTMGINSYMM TYSARTLGLC AISLPRQMAM ENSTTRP00000008085/1-1126 AEQKVESPQL FILYIQVISL MTMGINSYMM TYSARTLGLC AISLPRQMAM 451 500 ENSP00000356687/1-1124 QNATQHIQEI VQNTITLFKT EKILTNVNWT LVEDKTRIEY -IPFSHVSHN ENSBTAP00000045311/1-1126 QNAIKHIQEM IQSRITLFKT EKLLTNVNWT LVEEKTKIEY IIPTPHVSSD bmy_20098T0/1-769 QNAIKHIQEI IQNRITLFKT EKILTNVNWT LVEEKTKIEY IIPFPHVSCD ENSTTRP00000008085/1-1126 QNAIKHIQKI IQNRITLFKT EKILTNVNWT LVEEKTKIEY IIPFPHVSCD 501 550 ENSP00000356687/1-1124 -DMKTESTTD EALMEEARLH VAAIQMSSFE KQRNNGILEI EAARILIGAA ENSBTAP00000045311/1-1126 SKAKEEFPTD EVLIEEARLH VAIIQISSFE KQCNDGVLSV EAARTLIGAT bmy_20098T0/1-769 KKVKEESPTD EILIEEARLH ------SSFE KQCNDGVLSV EAARTLIGAT ENSTTRP00000008085/1-1126 KKVKEESPTD EVLIEEARLH VAIIQMSSFE KQCNDGVLSV EAARTLIGAT 551 600 ENSP00000356687/1-1124 KCYYSIQGKF MSIYDVSTYM RTRSWLIKFK NVLTFLEYCI EKIHFIPPES ENSBTAP00000045311/1-1126 KSYCHIQGKF MSIYDVSTYV RARSWLVKFK NMLTFLEYHK DNIMYIPVLH bmy_20098T0/1-769 KSYCHIQGKF MSIYDVSTYV RARSWLMKFK NILTFLEYHK DKAPLSLYGN ENSTTRP00000008085/1-1126 KSYCHIQGKF MSIYDVSTYV RARSWLMKFK NILTFLEYHE DKTPLSLYGN 601 650 ENSP00000356687/1-1124 NTFLTFIFHI VFSEEFEYTG QIINLIYIYP MIIHLWPMAR GLNVSALISI ENSBTAP00000045311/1-1126 NKFLIFIYHI VFSEEFENAE HIIGIMYIYP MIMHLWPTAR KLNVSGLIFV bmy_20098T0/1-769 NKFLIFIYRI VFSEEFEYAG HIIGIMYIYP MIMHLWPMAR ELNVSALILV ENSTTRP00000008085/1-1126 NKFLIFIYHI VFSEEFEYAG HILRIMYIYP MIMHLWPMAR ELNVSALILV 651 700 ENSP00000356687/1-1124 NYYFMFLYVL ESTLKIIILK RKYFQQCWNT LEFFILVIGI IDIFCVYFVK ENSBTAP00000045311/1-1126 NYYFVFLYLL ESALKIIILK RKYFHQHWNT LEFFIVLIGI VDIFCIYFVR bmy_20098T0/1-769 NYYFVFLYLL ESTLKITILK SRYFHQHWNT LEFFIMLIGI VDIFCIYFVR ENSTTRP00000008085/1-1126 NYYFVYLYLL ESALKITILK SRYFHQHWNT LEFCIVLIGI VDIFCIYFVR 701 750 ENSP00000356687/1-1124 LRPDNLALIQ LTVIMGYLRI IRFLPLFKII VPILIRIADV QIKKRLSLMY ENSBTAP00000045311/1-1126 LRPDNLILIQ FTVIIGYLRI IRFLPLLKII IPLLINIVDV QIKKRLSLTY bmy_20098T0/1-769 LRPDHLVLIQ FTVIIGYFRI IRFIPLIKVL IPLLMNIVDV QIKKRLSLMY ENSTTRP00000008085/1-1126 LRPDHLVLIQ FTVIMGYFRI IRFIPLIKVL IPLLMNIVDV QIKKRLSLMY 751 800 ENSP00000356687/1-1124 SITKGYIKSQ EDAKLLIKQI AVCESIYQKL CEILETNKQD AVKELVLMEH ENSBTAP00000045311/1-1126 SITKGYVKSL EDTKFLIRQI SSRKSIDQKL YEILETNKRD AVKELGLIEH bmy_20098T0/1-769 SITKGYVKSQ EDTKFLIKQI SSRESIN--- ---------- ---------- ENSTTRP00000008085/1-1126 SITKGYVKSQ EDTKFLIKQI SSRKSINQXX XXXXXXXXXX XXXXXXLIEH 801 850 ENSP00000356687/1-1124 EGRDVVIALK TKQAIRNVIA KALKNLTFLC SRGIIDKHEV IEINKVLLKK ENSBTAP00000045311/1-1126 EGRDVVIALK TKQAIRNVIA KALKSLTFLS SRGIIDKYES VEMNKVLLEK bmy_20098T0/1-769 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008085/1-1126 EGRDVVIALK TKQAIRNVIA KALKSLTFLW SRGIIDKHEG IEMNKVLLSK 851 900 ENSP00000356687/1-1124 LKALNNFPKA IPPPTPDIYL HNIIWLEGKD VLIDFFKERA KLACFDSGDT ENSBTAP00000045311/1-1126 IKSLNNFPMA IPLPTPDKYL HNIIWLENKD VLIEFFKERA KLAYFDYGDV bmy_20098T0/1-769 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008085/1-1126 IKSLNNFPMA IPPPTPDKYL HNIIWLENKD VLIEFFKERA KLACFDYGDV 901 950 ENSP00000356687/1-1124 ICKGGEMPQG IYLIISGMAI LHSLSPTFGI ESNQRCDRGS RDMFTEFCTT ENSBTAP00000045311/1-1126 ICKEGEMPQG IYLIISGMAI LESSPPTFGI DRSLRPDRES TTRFTEYCTS bmy_20098T0/1-769 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008085/1-1126 ICKEGEMPQG IYLIISGMAI LQSSPPTFGI DRSLRADRES ATRFTEYCTS 951 1000 ENSP00000356687/1-1124 GDIIGELSCL LKREIEYTVI CETSLQACFI SLEDLYEGFD AFWPSLEYKI ENSBTAP00000045311/1-1126 GDIIGELSCL LKREIEYTAI CETILQVCFI SLEDLYEGFD FFWPSLEYKI bmy_20098T0/1-769 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008085/1-1126 GDIIGELSCL LKCEIEYTAI CETILQACFI SLEDLYEGFD VFWPSLEYKI 1001 1050 ENSP00000356687/1-1124 WLKLALSTAY QYFESSLIDE DLRFQNCVMF NQAYVETLSS YSDMIIDNMT ENSBTAP00000045311/1-1126 WLKLALSIAY QYFESSLVDE DLKFQKCVML NHAYVETLSS YNEMIIDNVN bmy_20098T0/1-769 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008085/1-1126 WLKLALSIAY QYFESSLIDE DLKFQKCVAL NHAYVETLSS YNEMTIDNVN 1051 1100 ENSP00000356687/1-1124 MKFVIIVYGS VIDTKTEEPY FAPCIIPTTC EQVQGTSDLS KLLIIQASEL ENSBTAP00000045311/1-1126 MKFVILVYGS VIDTKTEVPY FAPCILPKTC EQVQGTSDLS KLLVIQAPAP bmy_20098T0/1-769 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000008085/1-1126 MKFVILVYGS VIDTKTEVPY LAPCILPKTC EQVEGTSDLS KLLVIQAPAP 1101 1150 ENSP00000356687/1-1124 TQRNSNTNVM ASVNTVFEQP GKNINGRQKM S- ENSBTAP00000045311/1-1126 DKNDGNAKVM VVLD--FWEP RSQISLREKC K- bmy_20098T0/1-769 ---------- ---------- ---------- -- ENSTTRP00000008085/1-1126 AENNNNAKVM GSVNTVL-EP RETITGREKM SW