KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:56:53 2014 Check: 00 .. Name: bmy_15406T0/1-140 Len: 268 Check: 1734 Weight: 1.00 Name: ENSBTAP00000045393/1-245 Len: 268 Check: 5556 Weight: 1.00 Name: ENSP00000359635/1-255 Len: 268 Check: 7684 Weight: 1.00 Name: ENSTTRP00000015201/1-259 Len: 268 Check: 7850 Weight: 1.00 // 1 50 bmy_15406T0/1-140 MAAAIASSLI RQKRQARERE KSNACKC--- VSSPSKGKTS CDKNKLNVFS ENSBTAP00000045393/1-245 MAAAIASSLI RQKRQARERE KSNACKC--- VSSPSKGKTS CDKNKLNVFS ENSP00000359635/1-255 ---------- MSGKVTKPKE EKDASKV--- LDDAPPGTQE YIMLRQDSIQ ENSTTRP00000015201/1-259 ---------V RTSVLVRHHL SSLGGSCYLI LDDAPPGTQE YIMLRQDSIQ 51 100 bmy_15406T0/1-140 RVKL------ FGSK------ --------KR RRRRPEPQLK GIVTKLYSRQ ENSBTAP00000045393/1-245 RVKL------ FGSK------ --------KR RRRRPEPQLK GIVTKLYSRQ ENSP00000359635/1-255 SAELKKKESP FRAKCHEIFC CPLKQVHHKE NTEPEEPQLK GIVTKLYSRQ ENSTTRP00000015201/1-259 SAELKKKESP FRAKCHEIFC CPLKQVHHKE HTEPEEPQLK GIVTKLYSRQ 101 150 bmy_15406T0/1-140 GYHLQLQADG TIDGTKDEDS TYTLFNLIPV GLRVVAIQGV QTKLYLAMNS ENSBTAP00000045393/1-245 GYHLQLQADG TIDGTKDEDS TYTLFNLIPV GLRVVAIQGV QTKLYLAMNS ENSP00000359635/1-255 GYHLQLQADG TIDGTKDEDS TYTLFNLIPV GLRVVAIQGV QTKLYLAMNS ENSTTRP00000015201/1-259 GYHLQLQADG TIDGTKDEDS TYTLFNLIPV GLRVVAIQGV QTKLYLAMNS 151 200 bmy_15406T0/1-140 EGYLYTS--- -AEC------ ---------- ---------- -----VNR-- ENSBTAP00000045393/1-245 EGYLYTSEHF TPECKFKESV FENYYVTYSS MIYRQQQSGR GWYLGLNKEG ENSP00000359635/1-255 EGYLYTSELF TPECKFKESV FENYYVTYSS MIYRQQQSGR GWYLGLNKEG ENSTTRP00000015201/1-259 EGYLYTSEHF TPECKFKESV FENYYVTYSS MIYRQQQSGR GWYLGLNKEG 201 250 bmy_15406T0/1-140 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045393/1-245 EIMKGNHVKK NKPAAHFLPK PLKVAMYKEP SLHDLTEFSR SGSGTPTKSR ENSP00000359635/1-255 EIMKGNHVKK NKPAAHFLPK PLKVAMYKEP SLHDLTEFSR SGSGTPTKSR ENSTTRP00000015201/1-259 EIMKGNHVKK NKPAAHFLPK PLKVAMYKEP SLHDLTEFSR SGSGTPTKSR 251 300 bmy_15406T0/1-140 ---------- -------- ENSBTAP00000045393/1-245 SVSGVLNGGK SMSHNEST ENSP00000359635/1-255 SVSGVLNGGK SMSHNEST ENSTTRP00000015201/1-259 SVSGVLNGGK SMSHNEST