KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:56:54 2014 Check: 00 .. Name: ENSBTAP00000045403/1-288 Len: 471 Check: 9840 Weight: 1.00 Name: ENSTTRP00000009332/1-287 Len: 471 Check: 6218 Weight: 1.00 Name: bmy_13401T0/1-451 Len: 471 Check: 2194 Weight: 1.00 Name: BACU019630/1-288 Len: 471 Check: 612 Weight: 1.00 // 1 50 ENSBTAP00000045403/1-288 MARDPSHLPR ACRPPAIPVR VAEAALEISR TAIEEQLKIC GHKKDADVFE ENSTTRP00000009332/1-287 MTGYLEHLPC AFQHTTSQAK AADAALEISR RXXXXXXXXX XXXXXXXVFE bmy_13401T0/1-451 --MWLDRLII CYQ------- ---------- -AVEDELKIC GHKKDADVFE BACU019630/1-288 MTGDLKHLPC AFQHTTSQAK AADAALEISR RAVEDQLKIC GHKKDADVFE 51 100 ENSBTAP00000045403/1-288 LFLSQKELTE VIDLSRFKKL KYLWLHHNKL RKVIFLTSNH FLLEIYINHN ENSTTRP00000009332/1-287 LFLSQKELTE VIDLSRV-KI KYLWLHHNKL HGITFITRNY CLAELYLNNN bmy_13401T0/1-451 LFLSQKELTE VIDLSRFKKL KYLWLHHNKL HGITFITRNY CLAELYLNNN BACU019630/1-288 LFLSQKELTE VIDLSRFKKL KYLWLHHNKL HGITFITRNY CLAELYLNNN 101 150 ENSBTAP00000045403/1-288 TIVEIEKMHL VPSLHGLLLG RKVMTNLDSI FKSMEGKKEL KNLTLYQNPL ENSTTRP00000009332/1-287 AIFDIQXXXX XXXXXXXXLH HNELTNIEAT VKELKGMLNL KTLTLYQNPL bmy_13401T0/1-451 EIFDIQGLHS LHSLHILLLH HNELTNIEAT VKELKRMLNL KTLTLYQNPL BACU019630/1-288 EIFDIQGLHS LHSLHILLLH HNELTNIEAT VKELKGMLNL KTLTLYQNPL 151 200 ENSBTAP00000045403/1-288 CQYNLYRLYI IYHLPGVELL DRNQVTEKER RSMITLFNHK KAHIVQSIAF ENSTTRP00000009332/1-287 CQYNLYRLYT IYHLPGVELL DGNQVTEKER RSMITIFNHK KSHIVQSIAF bmy_13401T0/1-451 CQYNLYRLYT IYHLPGVELL DGNQVTEKER RSMITIFNHK KSHIVQSIAF BACU019630/1-288 CQYNLYRLYT IYHLPGVELL DGNQVTEKER RSMIMIFNHK KSHIVQSIAF 201 250 ENSBTAP00000045403/1-288 RGKVDASWDP RSPFKQKPAQ RVPS------ ---------- ---------- ENSTTRP00000009332/1-287 RGKVDASWNP RSPLKQKPAQ RVPS------ ---------- ---------- bmy_13401T0/1-451 RGKVDASWNP RSPLKQKPAQ RVPSERLTIS LLQIGSMTLI NLIFYKPNIY BACU019630/1-288 RGKVDASWNP RSPLKQKPAQ RVPS------ ---------- ---------- 251 300 ENSBTAP00000045403/1-288 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009332/1-287 ---------- ---------- ---------- ---------- ---------- bmy_13401T0/1-451 NKINKTHYEL DRSKGDFTFY YFLVYIHQSK IIWGDEKRHG RLGLATCEGN BACU019630/1-288 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000045403/1-288 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009332/1-287 ---------- ---------- ---------- ---------- ---------- bmy_13401T0/1-451 DAVNPSPKAE AVCSLLPVSW QELRLGALLA QQVLVHSITS LALGLLERNK BACU019630/1-288 ---------- ---------- ---------- ---------- ---------- 351 400 ENSBTAP00000045403/1-288 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009332/1-287 ---------- ---------- ---------- ---------- ---------- bmy_13401T0/1-451 QINAKNPRGL NCPKYFFLIW SLSPFTDACA YLKKEKGSVS AHETEYLNYK BACU019630/1-288 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000045403/1-288 -------DFA FANNVDKTMF DDPEDAVFVR SMKRSAMAIT SLNWDTVPTR ENSTTRP00000009332/1-287 -------DFA FANNVDKTMF DDPEDAVFVR SLKRSAMAIT SLNWDTVPTR bmy_13401T0/1-451 NFHLDSTDFA FANNVDKTMF DDPEDAVFVR SMKRSAMAIT SLNWDTVPTR BACU019630/1-288 -------DFA FANNVDKTVF DDPEDAVFVR SMKRSAMAIT SLNWDTVPTV 451 500 ENSBTAP00000045403/1-288 EEKYLEEKDT GPAQMLTITL R ENSTTRP00000009332/1-287 EEKYLEEKDT EPVQMLTVTL R bmy_13401T0/1-451 EEKYCEEKDT GPAQMLTVTL R BACU019630/1-288 EEKYREEKDT GPAQMLTVTL R