KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:56:55 2014 Check: 00 .. Name: BACU000471/1-493 Len: 567 Check: 1825 Weight: 1.00 Name: bmy_13399T0/1-493 Len: 567 Check: 3538 Weight: 1.00 Name: ENSTTRP00000009355/1-419 Len: 567 Check: 2265 Weight: 1.00 Name: ENSP00000397249/1-419 Len: 567 Check: 3954 Weight: 1.00 Name: ENSBTAP00000045408/1-419 Len: 567 Check: 4878 Weight: 1.00 // 1 50 BACU000471/1-493 MCLSFTPPVS AATTAAAATA AAGVAAAPSL ARRRYLLGQN STENYLAFGR bmy_13399T0/1-493 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000009355/1-419 ---------- ---------- ---------- ---------- ---------- ENSP00000397249/1-419 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045408/1-419 ---------- ---------- ---------- ---------- ---------- 51 100 BACU000471/1-493 FKLAQFLSQN ALALLRPELQ NFMNKHQKPV LTGQRFKTRK RD---EKEKF bmy_13399T0/1-493 ---------- ---------- --MNKHQKPV LTGQRFKTRK RENVHEKEKF ENSTTRP00000009355/1-419 ---------- ---------- --MNKHQKPV LTGQRFKTRK RD---EKEKF ENSP00000397249/1-419 ---------- ---------- --MNKHQKPV LTGQRFKTRK RD---EKEKF ENSBTAP00000045408/1-419 ---------- ---------- --MNKHQKPV LTGQRFKTRK RD---EKEKF 101 150 BACU000471/1-493 EPTVFRDTLV QGLNEAGDDL EAVAKFLDST GSRLDYRRYA DTLFDILVAG bmy_13399T0/1-493 EPTVFRDTLV QGLNEAGDDL EAVAKFLDST GSRLDYRRYA DTLFDILVAG ENSTTRP00000009355/1-419 EPTVFRDTLI QGLNEAGDDL EAVAKFLDST GSRLDYRRYA DTLFDILVAG ENSP00000397249/1-419 EPTVFRDTLV QGLNEAGDDL EAVAKFLDST GSRLDYRRYA DTLFDILVAG ENSBTAP00000045408/1-419 EPTVFRDTLV QGLNEAGDDL EAVAKFLDST GSRLDYRRYA DTLFDILVAG 151 200 BACU000471/1-493 SM-------- ---------- ------LAPG GTRIDDGDKT KMTNHCVFSA bmy_13399T0/1-493 SMLGIDLFCK CSSDFSIVLM VITFPFLAPG GTRIDDGDKT KMTNHCVFSA ENSTTRP00000009355/1-419 SM-------- ---------- ------LAPG GTRIDDGDKT KMTNHCVFSA ENSP00000397249/1-419 SM-------- ---------- ------LAPG GTRIDDGDKT KMTNHCVFSA ENSBTAP00000045408/1-419 SM-------- ---------- ------LAPG GTRIDDGDKT KMTNHCVFSA 201 250 BACU000471/1-493 NEDHETIRNY AQVFNKLIRR YKYLEKAFED EMKKLLLFLK AFSEAEQTKL bmy_13399T0/1-493 NEDHETIRNY AQVFNKLIRR YKYLEKAFED EMKKLLLFLK AFSEAEQTKL ENSTTRP00000009355/1-419 NEDHETIRNY AQVFNKLIRR YKYLEKAFED EMKKLLLFLK AFSEAEQTKL ENSP00000397249/1-419 NEDHETIRNY AQVFNKLIRR YKYLEKAFED EMKKLLLFLK AFSETEQTKL ENSBTAP00000045408/1-419 NEDHETIRSY AQVFNKLIRR YKYLEKAFED EMKKLLLFLK AFSETEQTKL 251 300 BACU000471/1-493 AMLSGILLGN GTLPANILTS LFTDSLVKEG IAASFAVKLF KAWMAEKDAN bmy_13399T0/1-493 AMLSGILLGN GTLPANILTS LFTDSLVKEG IAASFAVKLF KAWMAEKDAN ENSTTRP00000009355/1-419 AMLSGILLGN GNLPANILTS LFTDSLVKEG IAASFAVKLF KAWMAEKDAN ENSP00000397249/1-419 AMLSGILLGN GTLPATILTS LFTDSLVKEG IAASFAVKLF KAWMAEKDAN ENSBTAP00000045408/1-419 AMLSGILLGS GTLPATILTS LFTDSLVKEG IAASFAVKLF KSWMAEKDAN 301 350 BACU000471/1-493 SVTSSLRKAN LDKRLLELFP VNRQSVDHFA QYFTDAGLKE LSDFLRVQQS bmy_13399T0/1-493 SVTSSLRKAN LDKRLLELFP VNRQSVDHFA QYFTDAGLKE LSDFLRVQQS ENSTTRP00000009355/1-419 SVTSSLRKAN LDKRLLELFP VNRQSVDHFA QYFTDAGLKE LSDFLRVQQS ENSP00000397249/1-419 SVTSSLRKAN LDKRLLELFP VNRQSVDHFA KYFTDAGLKE LSDFLRVQQS ENSBTAP00000045408/1-419 SVTSSLRKAN LDKRLLELFP VNRQSVDHFA KYFTDAGLKE LSDFLRVQQS 351 400 BACU000471/1-493 LGTXXXXXXX XXXXXXXXXX XXXKE----- ---------- ---------- bmy_13399T0/1-493 LGTRKELQKE LQERLSQE-- CPIKESCLKK TSYLNFKNFY MIIQKLHKES ENSTTRP00000009355/1-419 LGTRKELQKE LQERLSQE-- CPIKE----- ---------- ---------- ENSP00000397249/1-419 LGTRKELQKE LQERLSQE-- CPIKE----- ---------- ---------- ENSBTAP00000045408/1-419 LGTRKELQKE LQERLSQE-- CPIKE----- ---------- ---------- 401 450 BACU000471/1-493 ---------- ---------- --VVLYVKEE MKRNDLPETA VIGLLWTCIM bmy_13399T0/1-493 FPFATYSQVP NPHYLACSQP CKVVLYVKEE MKRNDLPETA VIGLLWTCVM ENSTTRP00000009355/1-419 ---------- ---------- --VVLYVKEE MKRNDLPETA VIGLLWTCIM ENSP00000397249/1-419 ---------- ---------- --VVLYVKEE MKRNDLPETA VIGLLWTCIM ENSBTAP00000045408/1-419 ---------- ---------- --VVLYVKEE MKRNDLPETA VIGLLWTCIM 451 500 BACU000471/1-493 NAVEWNKKEE LVAEQALKHL KQYAPLLAVF SSQGQSELIL LQKVQEYCYD bmy_13399T0/1-493 NAVEWNKKEE LVAEQALKHL KQYAPLLAVF SSQGQSELIL LQKVQEYCYD ENSTTRP00000009355/1-419 NAVEWNKKEE LVAEQALKHL KQYAPLLAVF SSQGQSELIL LQKVQEYCYD ENSP00000397249/1-419 NAVEWNKKEE LVAEQALKHL KQYAPLLAVF SSQGQSELIL LQKVQEYCYD ENSBTAP00000045408/1-419 NAVEWNKKEE LVAEQALKHL KQYAPLLAVF SSQGQSELIL LQKVQEYCYD 501 550 BACU000471/1-493 NIHFMKAFQK IVVLFYKADV LSEEAILKWY KEAHVAKGKS VFLDQMKKFV bmy_13399T0/1-493 NIHFMKAFQK IVVLFYKADV LSEEAILKWY KEAHVAKGKS VFLDQMKKFV ENSTTRP00000009355/1-419 NIHFMKAFQK IVVLFYKADV LSEEAILKWY KEAHVAKGKS VFLDQMKKFV ENSP00000397249/1-419 NIHFMKAFQK IVVLFYKADV LSEEAILKWY KEAHVAKGKS VFLDQMKKFV ENSBTAP00000045408/1-419 NIHFMKAFQK IVVLFYKADV LSEEAILKWY KEAHVAKGKS VFLDQMKKFV 551 600 BACU000471/1-493 EWLQNAEEES ESEGEEN bmy_13399T0/1-493 EWLQNAEEES ESEGEEN ENSTTRP00000009355/1-419 EWLQNAEEES ESEGEEN ENSP00000397249/1-419 EWLQNAEEES ESEGEEN ENSBTAP00000045408/1-419 EWLQNAEEES ESEGEEN