KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:56:55 2014 Check: 00 .. Name: ENSTTRP00000001039/1-865 Len: 867 Check: 705 Weight: 1.00 Name: bmy_12062T0/1-821 Len: 867 Check: 793 Weight: 1.00 Name: ENSP00000296543/1-866 Len: 867 Check: 7500 Weight: 1.00 Name: ENSBTAP00000045426/1-866 Len: 867 Check: 6823 Weight: 1.00 // 1 50 ENSTTRP00000001039/1-865 MPAVSLPPKE NALFKRILRC YEHKQYRNGL KFCKQILSNP KFAEHGETLA bmy_12062T0/1-821 MPAVSLPPKE NALFKRILRC YEHKQYRNGL KFCKQILSNP KFAEHGETLA ENSP00000296543/1-866 MPAVSLPPKE NALFKRILRC YEHKQYRNGL KFCKQILSNP KFAEHGETLA ENSBTAP00000045426/1-866 MPAVSLPPKE NALFKRILRC YEHKQYRNGL KFCKQILSNP KFAEHGETLA 51 100 ENSTTRP00000001039/1-865 MKGLTLNCLG KKEEAYELVR RGLRNDLKSH VCWHVYGLLQ RSDKKYDEAI bmy_12062T0/1-821 MKGLTLNCLG KKEEAYELVR RGLRNDLKSH VCWHVYGLLQ RSDKKYDEAI ENSP00000296543/1-866 MKGLTLNCLG KKEEAYELVR RGLRNDLKSH VCWHVYGLLQ RSDKKYDEAI ENSBTAP00000045426/1-866 MKGLTLNCLG KKEEAYELVR RGLRNDLKSH VCWHVYGLLQ RSDKKYDEAI 101 150 ENSTTRP00000001039/1-865 KCYRNALKWD KDNLQILRDL SLLQIQMRDL EGYRETRYQL LQLRPAQRAS bmy_12062T0/1-821 KCYRNALKWD KDNLQILRDL SLLQIQMRDL EGYR------ ---------- ENSP00000296543/1-866 KCYRNALKWD KDNLQILRDL SLLQIQMRDL EGYRETRYQL LQLRPAQRAS ENSBTAP00000045426/1-866 KCYRNALKWD KDNLQILRDL SLLQIQMRDL EGYRETRYQL LQLRPAQRAS 151 200 ENSTTRP00000001039/1-865 WIGYAIAYHL LEDYEMAAKI LEEFRKTQQT SPDKVDYEYS ELLLYQNQVL bmy_12062T0/1-821 ---------- ---------- ---------T SPDKVDYEYS ELLLYQNQVL ENSP00000296543/1-866 WIGYAIAYHL LEDYEMAAKI LEEFRKTQQT SPDKVDYEYS ELLLYQNQVL ENSBTAP00000045426/1-866 WIGYAIAYHL LEDYEMAAKI LEEFRKTQQT SPDKVDYEYS ELLLYQNQVL 201 250 ENSTTRP00000001039/1-865 REAGLYREAL EHLCTYEKQI CDKLAVEETK GELLLQLCRL EDAADVYRGL bmy_12062T0/1-821 REAGLYREAL EHLCTYEKQI CDKLAVEETK GELLLQLCRL GDAADVYRGL ENSP00000296543/1-866 REAGLYREAL EHLCTYEKQI CDKLAVEETK GELLLQLCRL EDAADVYRGL ENSBTAP00000045426/1-866 REAGLYREAL EHLCTYEKQI CDKLAVEETK GELLLQLCRL EDAADVYRGL 251 300 ENSTTRP00000001039/1-865 QERNPENWAY YKGLEKALKP ANMLERLKIY EEAWTKYPRG LVPRRLPLNF bmy_12062T0/1-821 QERNPENWAY YKGLEKALKP ANMLERLKIY EEAWTKYPRG LVPRRLPLNF ENSP00000296543/1-866 QERNPENWAY YKGLEKALKP ANMLERLKIY EEAWTKYPRG LVPRRLPLNF ENSBTAP00000045426/1-866 QERNPENWAY YKGLEKALKP ANMLERLKIY EEAWTKYPRG LVPRRLPLNF 301 350 ENSTTRP00000001039/1-865 LSGEKFKECL DKFLRMNFSK GCPPVFNTLR SLYKDKEKVA IIEVXXXXXX bmy_12062T0/1-821 LSGEKFKECL DKFLRMNFSK GCPPVFNTLR SLYKDKEKVA IIE-ELVVGY ENSP00000296543/1-866 LSGEKFKECL DKFLRMNFSK GCPPVFNTLR SLYKDKEKVA IIE-ELVVGY ENSBTAP00000045426/1-866 LSGEKFKECL DKFLRMNFSK GCPPVFNTLR SLYKDKEKVA IIE-ELVVGY 351 400 ENSTTRP00000001039/1-865 XXXXXXXXXX XXXXDGKEEP PTTLLWVQYY LAQHYDRTGQ PSVALGYINT bmy_12062T0/1-821 ETSLKSCRLF NPSDDGKEEP PTTLLWVQYY LAQHYDRTGQ PSAALGYINT ENSP00000296543/1-866 ETSLKSCRLF NPNDDGKEEP PTTLLWVQYY LAQHYDKIGQ PSIALEYINT ENSBTAP00000045426/1-866 ETSLKSCRLF NPNDDGKEEP PTTLLWVQYY LAQHYDKIGQ PSIALEYINT 401 450 ENSTTRP00000001039/1-865 AIESTPTLIE LFLVKAKIYK HAGNIKEAAR WMDEAQALDT ADRFINSKCA bmy_12062T0/1-821 AIESTPTLIE LFLVKAKIYK HAGNIKEAAR WMDEAQALDT ADRFINSKCA ENSP00000296543/1-866 AIESTPTLIE LFLVKAKIYK HAGNIKEAAR WMDEAQALDT ADRFINSKCA ENSBTAP00000045426/1-866 AIESTPTLIE LFLVKAKIYK HAGNIKEAAR WMDEAQALDT ADRFINSKCA 451 500 ENSTTRP00000001039/1-865 KYMLKANLIK EAEEMCSKFT RDETSAVEN- NEMQCMWFQT ECAQAYKAMN bmy_12062T0/1-821 KYMLKANLIK EAEEMCSKFT REGTSAVENL NEMQCMWFQT ECAQAYKAMN ENSP00000296543/1-866 KYMLKANLIK EAEEMCSKFT REGTSAVENL NEMQCMWFQT ECAQAYKAMN ENSBTAP00000045426/1-866 KYMLKANLIK EAEEMCSKFT REGTSAVENL NEMQCMWFQT ECAQAYKAMN 501 550 ENSTTRP00000001039/1-865 KFGEA-KKCH EIERHFIEIT DDQFDFHTYC MRKITLRSYV DLLKLEDVLR bmy_12062T0/1-821 KFGEALKKCH EIERHFIEIT DDQFDFHTYC MRKITLRSYV DLLKLEDVLR ENSP00000296543/1-866 KFGEALKKCH EIERHFIEIT DDQFDFHTYC MRKITLRSYV DLLKLEDVLR ENSBTAP00000045426/1-866 KFGEALKKCH EIERHFIEIT DDQFDFHTYC MRKITLRSYV DLLKLEDVLR 551 600 ENSTTRP00000001039/1-865 QHPFYFKAAR IAIEIYLKLH DNPLTDENKE HEADTANMSD KELKKLRNKQ bmy_12062T0/1-821 QHPFYFKAAR IAIEIYLKLH DNPLTDENKE HEADTANMSD KELKKLRNKQ ENSP00000296543/1-866 QHPFYFKAAR IAIEIYLKLH DNPLTDENKE HEADTANMSD KELKKLRNKQ ENSBTAP00000045426/1-866 QHPFYFKAAR IAIEIYLKLH DSPLTDENKE HEADTANMSD KELKKLRNKQ 601 650 ENSTTRP00000001039/1-865 RRAQKKAQIE EEKKNAEKEK QQRNQKKKKD DDDEEIGGPK EELIPEKLAK bmy_12062T0/1-821 RRAQKKAQIE EEKKNAEKEK QQRNQKKKKD DDDEEIGGPK EELIPEKLAK ENSP00000296543/1-866 RRAQKKAQIE EEKKNAEKEK QQRNQKKKKD DDDEEIGGPK EELIPEKLAK ENSBTAP00000045426/1-866 RRAQKKAQIE EEKKNAEKEK QQRNQKKKKD DDDEEIGGPK EELIPEKLAK 651 700 ENSTTRP00000001039/1-865 VETPLEEAIK FLTPLKNLVK NKIETHLFAF EIYFRKEKFL LMLQSVKRAF bmy_12062T0/1-821 VETPLEEAIK FLTPLKNLVK NKIETHLFAF EIYFRKEKFL LMLQSVKRAF ENSP00000296543/1-866 VETPLEEAIK FLTPLKNLVK NKIETHLFAF EIYFRKEKFL LMLQSVKRAF ENSBTAP00000045426/1-866 VETPLEEAIK FLTPLKNLVK NKIETHLFAF EIYFRKEKFL LMLQSVKRAF 701 750 ENSTTRP00000001039/1-865 AIDSSHPWLH ECMIRLFSTA VCESKDLPDT VRTVLKQEMN RLFGATNPKN bmy_12062T0/1-821 AIDSSHPWLH ECMIRLFSTA VCESKDLPGT VRTVLKQEMN RLFGATNPKN ENSP00000296543/1-866 AIDSSHPWLH ECMIRLFNTA VCESKDLSDT VRTVLKQEMN RLFGATNPKN ENSBTAP00000045426/1-866 AIDSSHPWLH ECMIRLFSTA VCESKDLPDA VRTVLKQEMN RLFGATNPKN 751 800 ENSTTRP00000001039/1-865 FNETFLKRNS DSLPHRLSAA KMVYYLDPSS QKRAIELATT LDESLTNRNL bmy_12062T0/1-821 FNETFLKRNS DSLPHRLSAA KMVYYLDPSS QKRAVELATT LDESLTSRNL ENSP00000296543/1-866 FNETFLKRNS DSLPHRLSAA KMVYYLDPSS QKRAIELATT LDESLTNRNL ENSBTAP00000045426/1-866 FNETFLKRNS DSLPHRLSAA KMVYYLDPSS QKRAIELATT LDESLTNRNL 801 850 ENSTTRP00000001039/1-865 QTCMEVLEAL CAGSLGDCKE AAEVYRANCH KLFPYALAFM PPGYEEDMKI bmy_12062T0/1-821 QTCMEVLEAL CDGSLGDCKE AAEVYRANCH KLFPYALAFM PPGYEEDMKI ENSP00000296543/1-866 QTCMEVLEAL YDGSLGDCKE AAEIYRANCH KLFPYALAFM PPGYEEDMKI ENSBTAP00000045426/1-866 QTCMEVLEAL CDGSLGDCKE AAEVYRANCH KLFPYALAFM PPGYEEDMKI 851 900 ENSTTRP00000001039/1-865 TVNGDSSAET EELANEI bmy_12062T0/1-821 TVNGDSSAET EELANEI ENSP00000296543/1-866 TVNGDSSAEA EELANEI ENSBTAP00000045426/1-866 TVNGDSSAET EELANEI