KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:56:57 2014 Check: 00 .. Name: ENSBTAP00000045443/1-530 Len: 579 Check: 5727 Weight: 1.00 Name: ENSTTRP00000009984/1-579 Len: 579 Check: 9901 Weight: 1.00 Name: bmy_21989T0/1-433 Len: 579 Check: 4922 Weight: 1.00 Name: BACU009594/1-558 Len: 579 Check: 8975 Weight: 1.00 // 1 50 ENSBTAP00000045443/1-530 ---------- ---------- --MILRRIPV LKKYMEKTHQ KTVIFGQEKT ENSTTRP00000009984/1-579 MFFQIFLRFV SNLSTIVTGF VSVVVHWIPV LKKYMENTHQ KKVIFSKRKS bmy_21989T0/1-433 ---------- ---------- ---------- ---------- ---------- BACU009594/1-558 ---------- -------MDL NSDDDGYELL LKTYMENTHQ KKVIFSKRKS 51 100 ENSBTAP00000045443/1-530 LPCIAPLLTT VEETPQVISA GVQGHFPEWL SGYLLRVGPG KFEFGKDKYN ENSTTRP00000009984/1-579 LPCIAPLLTT VEETPQIISA RVRGHFPKWL NGYLLRIGPG KFEYGKDKYN bmy_21989T0/1-433 ---------- ---------- ---------- ---------- ---------- BACU009594/1-558 LPCIAPLLTT VEETPQIISA QVRGHFPKWL NGCLLRIGPG KFEYGKDKYN 101 150 ENSBTAP00000045443/1-530 HWFDGMALLH QFKVEKGTVT YRSKFLQSDT YKANSDRDRI VISEFGTLAL ENSTTRP00000009984/1-579 HWFDGMALLH QFKVEKGTVT YRSKFLQSDT YKANSVHDRI VISEFGTLAL bmy_21989T0/1-433 -----MALLH QFKVEKGTVT YRSKFLQSDT YKANSVHDRI VISEFGTLAL BACU009594/1-558 HWFDGMALLH QFKVEKGTVT YRSKFLQSDT YKANSVHDRI VISEFGTLAL 151 200 ENSBTAP00000045443/1-530 PDPCKNVFER FMSKFEKP-- --AITDNTNV NYVLYKGDYY LSTETNFMNK ENSTTRP00000009984/1-579 PDPCKNVFER FLSKFEPPGK FAAITDNTNV NYVQYKGDYY ISTETNFMNK bmy_21989T0/1-433 PDPCKNVFER FMSKFEPP-- --AITDNTNV NYVQYKGDYY ISTETNFMNK BACU009594/1-558 PDPCKNVFER FMSKFELP-- --AITDNTNV NYVQYKGDYY ISTETNFMNK 201 250 ENSBTAP00000045443/1-530 VDIETLEKTE KVNWTKFIAV NGATAHPHYD PDGTTYNMGN SYGKHGSCYN ENSTTRP00000009984/1-579 VDIETLEKTE KVDWSKFIAV NGATAHPHYD KDGTAYNMGN SYGQHGSCYN bmy_21989T0/1-433 VDIETLEKTE KVDWSKFIAV NGATAHPHYD KDGTAYNMGN SYGQHGSCYN BACU009594/1-558 VDIETLEKTE KVDWSKFIAV NGATAHPHYD KDGTAYNMGN SYGQHGSCYN 251 300 ENSBTAP00000045443/1-530 VIRVPPEKSD PGETIHGAQV ICSIASEEGM RPSYYHSFGM TRNYIIFIEQ ENSTTRP00000009984/1-579 VIRVPPEKVD LGETIHGAQV ICSIASAERM KPSYYHSFGM TRNYIVFIEQ bmy_21989T0/1-433 VIRVPPEKVD LGETIHGAQV ICSIASAERM KPSYYHSFGM TRNYIVFIEQ BACU009594/1-558 VIRVPPEKVD LGETIHGAQV ICSIASAERM KPSYYHSFGM TRNYIVFIEQ 301 350 ENSBTAP00000045443/1-530 PLKINLWRII SSKIRGKAFS DGISWEPQYN TRFHVVDKHT GQLLPGMYFS ENSTTRP00000009984/1-579 PLKMNLWKII TSKIRGKAFS DGISWEPQYN TWFHVVDKHT GQLLPGMYYS bmy_21989T0/1-433 PLKMNLWKII TSKIRGKAFS DGISWEPQYN TRFHVVDKHT GQLLPGMYYS BACU009594/1-558 PLKMNLWKII TSKIRGKAFS DGISWEPQYN TRFHVVDKHT GQLLPGMYYS 351 400 ENSBTAP00000045443/1-530 KPFVTFHQIN AFEDQGCVVI DLCCQDDGGI LEVYQLQNLR KTGKELDQVY ENSTTRP00000009984/1-579 KPFVTFHQIN AFEDQGCVVI DLCCQDDGRS LEVYQLQNLR KTGKELDQVY bmy_21989T0/1-433 KPFVTFHQIN AFEDQGCVVI DLCCQDDGRS LEVYQLQNLR KTGKELDQVY BACU009594/1-558 KPFVTFHQIN AFEDQGCVVI DLCCQDDGRS LEVYQLQNLR KTGKELDQVY 401 450 ENSBTAP00000045443/1-530 NLIARNSPRR FVLPLLGNLN APEGENLSPL TYSSASAVKQ ADGKIWCSYE ENSTTRP00000009984/1-579 NSVARSFPRR FVLPLHVGLN APEGKNLSPL TYSSASAVKQ ADGKILCSYE bmy_21989T0/1-433 NSVAKSFPRR FVLPLHVSLN APEGENLSPL SYSSASAVKQ ADGKIWCSYE BACU009594/1-558 NSVARSFPRR FVLPLRVSLN APEGENLSPL SYSSASAVKQ ADGKIWCSYE 451 500 ENSBTAP00000045443/1-530 NLYPEDLKEE GSIEFPQINY GQFNGKKYQF FYGCGFRHLV GDSLIKVDVV ENSTTRP00000009984/1-579 NLYPEDLEEE GGVEFPQINY GQFSGKKYQF FYGCGFRHLV GDSLIKVDVV bmy_21989T0/1-433 NLYPEDLEEE GGVEFPQINY GQFSGKKYQF FYGCGFRHLV GDSLIKVDVV BACU009594/1-558 NLYPEDLEEE GGVEFPQINY GQFSGKKYQF FYGCGFRHLV GDSLIKVDVV 501 550 ENSBTAP00000045443/1-530 NKTRRVWRED GFYPSEPVFV PVPGASKEDD GVILSVVITP NQEQKKFSSC ENSTTRP00000009984/1-579 NKTLTVWRED GFYPSEPVFV PVPGANEEDG GVILSVVITP NQNERNFLLV bmy_21989T0/1-433 NKTLM----- ---------- ---------- ---------- --NERNFLLV BACU009594/1-558 NKTLTVWRED GFYPSEPVFV PVPGTNEEDG GVILSVVITP NQNERNFLLV 551 600 ENSBTAP00000045443/1-530 LGCQEL---- ---------- --------- ENSTTRP00000009984/1-579 LDAKNFEELG RAEVPVQMPY GFHGTFVTI bmy_21989T0/1-433 LDAKNFEELG RAEVPVQMPY GFHGTFVTI BACU009594/1-558 LDAKNFEELG RAEVPVQMPY GFHGTFVTI