KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:57:00 2014 Check: 00 .. Name: ENSP00000366061/1-153 Len: 153 Check: 1948 Weight: 1.00 Name: ENSBTAP00000045486/1-145 Len: 153 Check: 2530 Weight: 1.00 Name: bmy_11051T0/1-75 Len: 153 Check: 884 Weight: 1.00 Name: ENSTTRP00000005890/1-149 Len: 153 Check: 695 Weight: 1.00 // 1 50 ENSP00000366061/1-153 MKHLRPQFPL ILAIYCFCML QIPSSGFPQP LADPSDGLDI VQLEQLAYCL ENSBTAP00000045486/1-145 -MKYLAQFPS ILAIYCFCLL QIPSSGFPRP LADASDGLDI VKFEQMAY-- bmy_11051T0/1-75 -------MGS LVEI-CY--- --PCPGFPRP LADPPDGLDI VKLERLAY-- ENSTTRP00000005890/1-149 MKHLLAQFPS ILAIYCFCLL QIPSSGFPRP LADPPDGLDI VKLERLAY-- 51 100 ENSP00000366061/1-153 SQWAPLSRQP KDNQDIYKRF LFHYSRTQEA THPVKTGFPP VHPLMHLAAK ENSBTAP00000045486/1-145 --WASLSRQP KDNQDIYKRF LFHYSRTQEP AHPVKTGFPP VHPLMRLAAK bmy_11051T0/1-75 --WATLSRQP KDNQDIYKRF LFHYSRTQEP THPVKTGVSI LS-------- ENSTTRP00000005890/1-149 --WATLSRQP KDNQDIYKRF LFHYSRTQKP THPVKTGFPP VNSLMRLAAK 101 150 ENSP00000366061/1-153 LANRRMKRIL QRGSGTAAVD FTKKDHTATW GRPFFLFRPR NGRNIEDEAQ ENSBTAP00000045486/1-145 LADRRMKTFW RRDSRATAAD FTKKDYTATL GRPFFLFRPR NGRNLDFDT- bmy_11051T0/1-75 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000005890/1-149 LANQRMKRFR QRDSGAAAEH LTKKDHTATL ERPFFLFRPR NGRNLDLSTI 151 200 ENSP00000366061/1-153 IQW ENSBTAP00000045486/1-145 --W bmy_11051T0/1-75 --- ENSTTRP00000005890/1-149 QRQ