KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:00 2014 Check: 00 .. Name: bmy_03531T0/1-275 Len: 315 Check: 4572 Weight: 1.00 Name: ENSBTAP00000045487/1-291 Len: 315 Check: 3655 Weight: 1.00 Name: ENSP00000284116/1-314 Len: 315 Check: 5113 Weight: 1.00 Name: ENSTTRP00000016301/1-313 Len: 315 Check: 5460 Weight: 1.00 Name: BACU014003/1-314 Len: 315 Check: 5530 Weight: 1.00 // 1 50 bmy_03531T0/1-275 ----MRLWHK AASGHWVFWS GILM---GLD HQKRPKCHYS SLY------- ENSBTAP00000045487/1-291 MSSTAAFYLL STLGGYLVTS FLLLKYPTLL HQRKKQRFLI KHISHRGGAG ENSP00000284116/1-314 MSSTAAFYLL STLGGYLVTS FLLLKYPTLL HQRKKQRFLS KHISHRGGAG ENSTTRP00000016301/1-313 MSSTAAFYLL STLGGYLVTS FLLLKYPTLL HQRKKQRFLS KHISHRGGAG BACU014003/1-314 MSSTAAFYLL STLGGYLVTS FLLLKYPTLL HQRKKQRFLS KHISHRGGAG 51 100 bmy_03531T0/1-275 ---------F FSAVTVGTDM LELDCHITKD EEVVVSHDEN LKRSTGVNVN ENSBTAP00000045487/1-291 ENLENTMAAF QHAVTIGTDM LELDCHITKD EQVVVSHDEN LKRSTGINVN ENSP00000284116/1-314 ENLENTMAAF QHAVKIGTDM LELDCHITKD EQVVVSHDEN LKRATGVNVN ENSTTRP00000016301/1-313 ENLENTMAAF QHAVTVGTDM LELDCHITKD EEVVVSHDEN LKRSTGVNVN BACU014003/1-314 ENLENTMAAF QHAVTVGTDM LELDCHITKD EEVVVSHDEN LKRSTGVNVN 101 150 bmy_03531T0/1-275 ISDLKYCELP PYLGKLDVSF QK-------- --------VF EAFPNTPINI ENSBTAP00000045487/1-291 ISDLKYCELP PYLGKLDVSF QKACQCEGKD NRIPLLKEVF EAFPNTPINI ENSP00000284116/1-314 ISDLKYCELP PYLGKLDVSF QRACQCEGKD NRIPLLKEVF EAFPNTPINI ENSTTRP00000016301/1-313 ISDLKYCELP PYLGKLDVSF QKACQCE-KD NRIPLLNEVF EAFPNTPINI BACU014003/1-314 ICDLKYCELP PYLGKLDVSF QKACQCEGKD NRIPLLKEVF EAFPNTPINI 151 200 bmy_03531T0/1-275 DIKVNNNLLI KKVSELVKQY RREHITVWGN ASYEIVEKCY KENSEIPILF ENSBTAP00000045487/1-291 DIKVNNNLLI KKVSELVKQY RREHITVWGN ASYEIVEKCY KENSEIPILF ENSP00000284116/1-314 DIKVNNNVLI KKVSELVKRY NREHLTVWGN ANYEIVEKCY KENSDIPILF ENSTTRP00000016301/1-313 DIKVNNNLLX XXVSELVKQY RREHITVWGN ASYEIVEKCY KENSEIPILF BACU014003/1-314 DIKVNNNLLI KKVSELVKQY RREHITVWGN ASYEIVEKCY KENSEIPILF 201 250 bmy_03531T0/1-275 SLQRVLLILG LFFTGLLPFV PIREQFFEIP MPSIILKLKE PHTMSRSQKF ENSBTAP00000045487/1-291 SLQRVLLVLG LFFTGLLPFV PIREQFFEIP MPSIILKLKE PHTMSRSQKF ENSP00000284116/1-314 SLQRVLLILG LFFTGLLPFV PIREQFFEIP MPSIILKLKE PHTMSRSQKF ENSTTRP00000016301/1-313 SLQRVLLILG LFFTGLLPFV PIREQFFEIP MPSIILKLKE PHTMSRSQKF BACU014003/1-314 SLQRVLLILG LFFTGLLPFV PIREQFFEIP MPSIILKLKE PHTMSRSQKF 251 300 bmy_03531T0/1-275 LIWLSDTLLM RKALFDHLTA RGIQVYVWVL NEEQEYKRAF DLGATGVMTD ENSBTAP00000045487/1-291 LIWLSDILLM RKALFDHLTA RGIQ----VL EKDV------ ---------- ENSP00000284116/1-314 LIWLSDLLLM RKALFDHLTA RGIQVYIWVL NEEQEYKRAF DLGATGVMTD ENSTTRP00000016301/1-313 LIWLSDILLM RKALFDHLTA RGIQVYIWVL NEEHEYKRAF DLGATGVMTD BACU014003/1-314 LIWLSDTLLM RKALFDHLTA RGIQVYVWVL NEEQEYKRAF DLGATGVMTD 301 350 bmy_03531T0/1-275 YPTKLKDFLH NFSE- ENSBTAP00000045487/1-291 ----LRSIRR KHEKT ENSP00000284116/1-314 YPTKLRDFLH NFSA- ENSTTRP00000016301/1-313 YPTKLKDFLH NFSE- BACU014003/1-314 YPTKLKDFLH NFSE-