KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:01 2014 Check: 00 .. Name: ENSP00000250173/1-466 Len: 678 Check: 3040 Weight: 1.00 Name: BACU013254/1-651 Len: 678 Check: 259 Weight: 1.00 Name: ENSBTAP00000045522/1-472 Len: 678 Check: 9414 Weight: 1.00 Name: bmy_09840T0/1-401 Len: 678 Check: 5210 Weight: 1.00 Name: ENSTTRP00000006711/1-473 Len: 678 Check: 686 Weight: 1.00 // 1 50 ENSP00000250173/1-466 ----MGWIT- ---------- ---------- ---------- ---------- BACU013254/1-651 MWFLCDWLNR MEIESFACDF LDGDSSFECC TIDPLTGSHF ACRRSPRLLT ENSBTAP00000045522/1-472 ----MGRIT- ---------- ---------- ---------- ---------- bmy_09840T0/1-401 --MFAITVT- ---------- ---------- ---------- ---------- ENSTTRP00000006711/1-473 ----MGRIT- ---------- ---------- ---------- ---------- 51 100 ENSP00000250173/1-466 ---------- ---------- ---------- -EDLI----- RRNAEHNDCV BACU013254/1-651 NGYYIWTEDS FLCDKDGNIT LRPSQTSVLY KENLVKIFRK KKRIRRSLSS ENSBTAP00000045522/1-472 ---------- ---------- ---------- -EDLI----- RRNAEHNDCV bmy_09840T0/1-401 ---------- ---------- ---------- -EDLI----- RRNAEHNDCI ENSTTRP00000006711/1-473 ---------- ---------- ---------- -EDLI----- RRNAEHNDCI 101 150 ENSP00000250173/1-466 IFSL--EELS LHQ------- ---------Q EIERLEH--- ---------- BACU013254/1-651 LFNLSTSESW LHGSIFGNAD SSANEDVWLE GVRRLETNHC NENGGGFDCS ENSBTAP00000045522/1-472 IFSL--EELS LHQ------- ---------Q EIERLEH--- ---------- bmy_09840T0/1-401 IFSL--EELS LHQ------- ---------Q EIERLEH--- ---------- ENSTTRP00000006711/1-473 IFSL--EELS LHQ------- ---------Q EIERLEH--- ---------- 151 200 ENSP00000250173/1-466 -IDKWCRD-- ---------- ---------- ---------- ---------- BACU013254/1-651 LTDNWESEKL DAESVKTSFS SHVTSRSPGE NSHNLPPQSQ FTASEHFQEN ENSBTAP00000045522/1-472 -IDKWCRD-- ---------- ---------- ---------- ---------- bmy_09840T0/1-401 -IDKWCRD-- ---------- ---------- ---------- ---------- ENSTTRP00000006711/1-473 -IDRWCRD-- ---------- ---------- ---------- ---------- 201 250 ENSP00000250173/1-466 ---------L KILYLQNNLI ---------- ---------- ---------- BACU013254/1-651 ILDHPKTSLL REVSFQANLF AACLIISACA SLSPSVSSEL HAAQGSQFND ENSBTAP00000045522/1-472 ---------L KILYLQNNLI ---------- ---------- ---------- bmy_09840T0/1-401 ---------L KILYLQNNLI ---------- ---------- ---------- ENSTTRP00000006711/1-473 ---------L KILYLQNNLI ---------- ---------- ---------- 251 300 ENSP00000250173/1-466 ------GKI- ---ENVSKLK KLEYLNLALN NIEKIENLE- GCEELAKLDL BACU013254/1-651 RGRQRGGDIN VMGKNVSKLK KLEYLNLALN NIEKIENLE- GCEGLTKLDL ENSBTAP00000045522/1-472 ------GKI- ---ENVSKLK KLEYLNLALN NIEKIENLE- GCEGLTKLDL bmy_09840T0/1-401 ------GKI- ---ENVSKLK KLEYLNLALN NIEKIENLEA GCEGLTKLDL ENSTTRP00000006711/1-473 ------GKI- ---ENVSKLK KLEYLNLALN NIEKIENLE- GCEGLTKLDL 301 350 ENSP00000250173/1-466 TVNFIGELSS IKNLQHNIHL KELFLMGNPC ASFDHYREFV VATLPQLKWL BACU013254/1-651 TVNFIGELSS VKTLQHNIHL KELFLMGNPC ADFDGYRQFV VATLQQLKWL ENSBTAP00000045522/1-472 TVNFIGELSS VKTLQGNIHL KELFLMGNPC ADFDGYRQFV VATLQQLKWL bmy_09840T0/1-401 TVNFVGELSS VKTLQHNXHL KELFLMGNPC ADFDGYRQFV VATLQQLKWL ENSTTRP00000006711/1-473 TVNFIGELSS VKTLQHNIHL KELFLMGNPC ADFDGYRQFV VAALQQLKWL 351 400 ENSP00000250173/1-466 DGKEIEPSER IKALQDYSVI EPQIREQEKD HCLKRAKLKE EAQRK-HQEE BACU013254/1-651 DGREIERSER IQALQDFPVV EQQIREQEKA YCLKRAKDKE ETQRKLQEEE ENSBTAP00000045522/1-472 DGKEIERSER IQALQNLPVV EQRIREQEKA YCLKRAKDKE EAQRKLEEEE bmy_09840T0/1-401 DGKEIERSER IQALQDFPVV EQQIREQEKA YCLKRAKDKE ETQRKLQEEE ENSTTRP00000006711/1-473 DGKEIERSER IQALQDFPVV EQQIREQEKA YCLKRAKDKE EAQRKLQEEE 401 450 ENSP00000250173/1-466 DKNEDKRSNA GFDGRWYTDI NATLSSL-ES KDHLQAPDTE EHNT--KKLD BACU013254/1-651 NEGEKEGRHT GFDGRWYTDI GATLPSSEES KDDVQAPEIQ EGECKKKKLD ENSBTAP00000045522/1-472 SKGEMGRSHT GSGGHWHADL SATLPSFEES KDYIQAPEIE EGQCKGKEFD bmy_09840T0/1-401 NEGEREGRHT GFDGRWYTDI SATLPSSEES KDDVQVPEMQ EGECKKKKLD ENSTTRP00000006711/1-473 NKGEREGRHT GFDGRWYTDI SATLPSSEES KDDVQAPEIQ EGECKKKKLD 451 500 ENSP00000250173/1-466 NSEDDLEFWN KPCLFTPESR LETLRHMEKQ RKKQEKLSEK KKKVKPPRTL BACU013254/1-651 NGEDDLEFWN KPSLYTPESR LETLRHMEKQ RKDQEKL--- ---------- ENSBTAP00000045522/1-472 DREDDLEFWN KPSLYTPESR LETLRHMEKQ RRDQERLSEK KKKVKPPRML bmy_09840T0/1-401 NGEDDLEFWN KPSLYTPESR LETLRHMEKQ RKDQEKLSEK KKKVKPPRVL ENSTTRP00000006711/1-473 SGEDDLEFWN KPSLYTPESR LETLRHMEKQ RKDQEKLSEK KKKVKPPRVL 501 550 ENSP00000250173/1-466 ITEDGKALNV NEPKIDFSLK DNEK--QIIL DLAVYRYMDT SLIDVDVQPT BACU013254/1-651 ---------- ---RLDFSLR DDEKRNQIVL DLAVYRYMDT SLIDVDVQPT ENSBTAP00000045522/1-472 VTEDGRALNV NEPKLDFTLK DDEKRNQIVL DLAVYRYMDT SLIDVDVQPT bmy_09840T0/1-401 ISENGRALNV NEPKLDFSLR DDEKRNQIVL DLAVYRYMDT SLIDVDVQPT ENSTTRP00000006711/1-473 ICEDGRALNV NEPKLDFSLR DDEKRNQIVL DLAVYRYMDT SLIDVDVQPT 551 600 ENSP00000250173/1-466 YVRVMIKGKP FQLVLPAEVK PDSSSAKRSQ TTGHLVICMP KVGEVITGGQ BACU013254/1-651 YVRVMVKGKP FQLVLPAEVK PDSSSARRAQ TTGHLVVYMP KVGEVITGCQ ENSBTAP00000045522/1-472 YVRVMVKGKP FQLILPAEVK PDSSFAKRSQ TTGHLVVCMP KVGEVIIGCQ bmy_09840T0/1-401 YVRVMVKGKP FQLVLPAEVK PDSSSAKRAQ TTGHLVVYMP K--------- ENSTTRP00000006711/1-473 YVRVMVKGKP FQLVLPAEVK PDSSSAKRAQ TTGHLVVYMP KVGEIITGCQ 601 650 ENSP00000250173/1-466 RAFKSMKTTS DRSREQTNTR SKHMEKLEVD PSKHSFPDVT NIVQEKKHTP BACU013254/1-651 GMSKPVKSTA DSSREQTDKR SQQMERLEVD PSKRAFPDVA NIVQEKRHTP ENSBTAP00000045522/1-472 RTSKPVKSTP DSSKEQTS-K SQQMERLEVD PSKRSIPDVA NIVQEKKHMP bmy_09840T0/1-401 ---------- ---------K KKNVNRL--- ---------- ---------- ENSTTRP00000006711/1-473 GTSKPVKSTP DSSREKTNKR SQQMERLEVD PSKHAFPDVA NIVQAKKHTP 651 700 ENSP00000250173/1-466 RR-RPEPKII PSEEDPTFED NPEVPPLI BACU013254/1-651 RRVQAEPKIM PSEEDPDFED NPYVPPLI ENSBTAP00000045522/1-472 RRVCAEPKII PSEEDPDFED NPEVPPLI bmy_09840T0/1-401 ---------- -------YQK K------- ENSTTRP00000006711/1-473 RRVQAEPKII PSEEDPDFED NPEVPPLI