KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:04 2014 Check: 00 .. Name: ENSP00000269202/1-701 Len: 801 Check: 2301 Weight: 1.00 Name: ENSBTAP00000045584/1-700 Len: 801 Check: 5919 Weight: 1.00 Name: ENSTTRP00000010370/1-701 Len: 801 Check: 7660 Weight: 1.00 Name: bmy_13027T0/1-665 Len: 801 Check: 5712 Weight: 1.00 Name: BACU001577/1-786 Len: 801 Check: 2218 Weight: 1.00 // 1 50 ENSP00000269202/1-701 MDLWNLSWFL FLDALLVISG LATPENFDVD GGMDQDIFDI NEGLGLDLFE ENSBTAP00000045584/1-700 MTSWYLPWFL CSAALLLVSG MPTPEIFDVD NGLDRDIFDI NEDLGLDLFE ENSTTRP00000010370/1-701 MDSWYLPSFL FFAALLRVFG LDPPEHKDVD GGIDQDIFDI NEDLGLDLFE bmy_13027T0/1-665 ---------- ---------- --------VD GGIDRDVFDI NEDLGLDLFE BACU001577/1-786 ---------- -----MKSLA IKEEQQKDVD GGIDRDILDI NEDLGLDLFE 51 100 ENSP00000269202/1-701 GDIRLDRAQI RNSIIGEKYR WPHTIPYVLE DSLEMNAKGV ILNAFERYRL ENSBTAP00000045584/1-700 GDIILDEIQE RNAIIGERYR WPHTIPYVLD DSLEMNARGV ILKAFERYRL ENSTTRP00000010370/1-701 GDIRLDGVQE RNSIVGESYR WPHTIPYVLD DSLXXXXXRV ILNAFERYRL bmy_13027T0/1-665 GDIRLDGVQE RNSIVGERYR WPHTIPYVLD DSLEMNARGV ILNAFERYRL BACU001577/1-786 GDIRLDGVQE RNSIVGERYR WPHTIPYVLD DSLEMNARGV ILNAFERYRL 101 150 ENSP00000269202/1-701 KTCIDFKPWA GETNYISVFK GSGCWSSVGN RRVGKQELSI GANCDRIATV ENSBTAP00000045584/1-700 KSCIDFKPWS GEPNYISVFK GNGCWSSVGK QLTGIQELSI GEGCDKIATV ENSTTRP00000010370/1-701 KTCIDFKPWS GEPNYISVFK GSGCWSSVGN RRVGKQELSI GKGCDRIATV bmy_13027T0/1-665 KTCIDFKPWS GEPNYISVFK GNGCWSSVGN RRIGRQELSI GKGCDKIATV BACU001577/1-786 KTCIDFKPWS GEPNYISVFK GNGCWSSVGN SRIGRQELSI GKGCDKIATV 151 200 ENSP00000269202/1-701 QHEFLHALGF WHEQSRSDRD DYVRIMWDRI LSGREHNFNT YSDDISDSLN ENSBTAP00000045584/1-700 QHEFLHALGF WHEQSRSDRN DYVSIIWNRI ISGKERNFDF YDDQVIDSMN ENSTTRP00000010370/1-701 QHEFLHALGF WHEQSRSDRD DYVSIIWDRI ISGKKNNFES YDDRQTDSLN bmy_13027T0/1-665 QHEFLHALGF WHEQSRSDRD DYVSIIWDRI ISGKEKNFKS YDDRKADSLN BACU001577/1-786 QHEFLHALGF WHEQSRSDRD DYVSIIWDRI ISGKEKNFKS YDDQKADSLN 201 250 ENSP00000269202/1-701 VPYDYTSVMH YSKTAFQNGT EPTIVTRISD FEDVIGQRMD FSDSDLLKLN ENSBTAP00000045584/1-700 VPYDYSSVMH YGKTAFGNGS EPTIVTRVPD FMDVIGQRMD FSDSDVLKLN ENSTTRP00000010370/1-701 VPYDYSSVMH YSKTAFQNGS EPTIVTRIPD FMDVIGQRMD FSDSDILKLN bmy_13027T0/1-665 VPYDYSSVMH YSKTAFRNGS EPTIVTRIPD FMDVIGQRMD FSDSDLLKLN BACU001577/1-786 VPYDYSSVMH YSKTAFQNGS EPTIVTRIPD FMDVIGQRMD FSDSDLLKLN 251 300 ENSP00000269202/1-701 QLYNCSSSLS FMDSCSFELE NVCGMIQSSG DNADWQRVSQ VPRGPESDHS ENSBTAP00000045584/1-700 QLYNCSSSLS FMESCDFELG NVCGMIQSSA DSADWQRLSE VSEGPESDHS ENSTTRP00000010370/1-701 QLYNCSSSLS FMESCDFELE NVCGMIQSSE DSADWQRVSQ VPEGPESDHS bmy_13027T0/1-665 QLYNCSSSLS FMESCDFELE NVCGMIQSSE DSADWQRVSQ VPEGPESDHS BACU001577/1-786 QLYNCSSSLS FMESCDFELE NVCGMIQSSE DSADWQRVSQ VPEGPESDHS 301 350 ENSP00000269202/1-701 NMGQCQGSGF FMHFDSSSVN VGATAVLESR TLYPKRGFQC LQFYLYNSGS ENSBTAP00000045584/1-700 NMGRCRGSGF FMHFNSSSVN EGATAILESR ILYPKRGFQC LQFFLYNSGS ENSTTRP00000010370/1-701 NMGRCKGSGF FMHFNRSSVN EGATAMLGSR ILYPKRGFQC LQFFLYNSGS bmy_13027T0/1-665 NMGRCKGSGF FMHFNSSSVN EGATAMLGSR ILYPKRGFQC LQFFLYNSGS BACU001577/1-786 NMGRCKGSGF FMHFNSSSVN EGATAMLGSR ILYPKRGFQC LQFFLHNSGS 351 400 ENSP00000269202/1-701 ESDQLNIYIR EYSADNVDGN LTLVEEIKEI PTGSWQLYHV TLKVTKKFRV ENSBTAP00000045584/1-700 EDDQLNIYIR EYSTAHLSRT LTLVEQIKDI PSGSWQLYHV TLNATNKFRV ENSTTRP00000010370/1-701 EYDQLNIYVR EYSAASVNRT LTLVEEIKDV PIGSWQLYHV TLKVTNKFRV bmy_13027T0/1-665 EYDQLNIYIR EYSAASVNRT LTLVEEIKDI PIGSWQLYHV TLKVSNKFRV BACU001577/1-786 EYDQLNIYIR EYSAANVNRT LTLVEEIKDI PIGSWQLYHV TLKVSNKFRV 401 450 ENSP00000269202/1-701 VFEGRKGSGA SLGGLSIDDI NLSETRCPHH IWHIRNFTQF IGSPNGTLYS ENSBTAP00000045584/1-700 VFEGVRGAGA SLGGLSIDDI NLSETRCPHH VWHIRNFTQL IGSPNGSFYS ENSTTRP00000010370/1-701 VFGGVRGAGA SRGGLSIDDI NLSETQCPHH VWHIRNFTQL IGSPSGSVYS bmy_13027T0/1-665 VFGGVRGAGA SRGGLSIDDI NLSETQCPHH VWHIRNFTQL IGSPSGSVFS BACU001577/1-786 VFGGVRGAGA SRGGLSIDDI NLSETQCPHH VWHIRNFTQL IGSPSGSVFS 451 500 ENSP00000269202/1-701 PPFYSSKGYA FQIYLNLAHV TNAGIYFHLI SGANDDQLQW PCPWQQATMT ENSBTAP00000045584/1-700 PPFYSSKGYA FQIYLNLDSL PKIGMYFHLI SGANDDHLEW PCPWQQVTIT ENSTTRP00000010370/1-701 PSFYSSKGYA FQIRLNLSSL PNVGMYFHLI SGANDDQLEW PCPWQQVTMT bmy_13027T0/1-665 PSFYSSKGYA FQICLNLSSL PNVGMYFHLI SGANDDQLEW PCPWQQVTMT BACU001577/1-786 PSFYSSKGYA FQICLNLSSL PNIGMYFHLI SGANDDQLEW PCPWQQVTMT 501 550 ENSP00000269202/1-701 LLDQNPDIRQ RMSNQRSITT DPFMTTDNGN YFWDRPSKVG TVALFSNGTQ ENSBTAP00000045584/1-700 ILDQTPDIRQ RMSKQQSLTT DPFLTIDNGN YFWDRPSKVG AQVIFPNGTQ ENSTTRP00000010370/1-701 ILDQNPDIRQ RMSNKRXXXX XXXXXXXNGD YFWDRPSKVG VQDFFPNGTQ bmy_13027T0/1-665 ILDQNPDIRQ RMSNKRSITT DPFMTTGNGT YFWDRPSKVG TPVFFPNGTQ BACU001577/1-786 ILDQNPDIRQ RMSNKRSITT DPFMTTGNGA YFWDRPSKVG TQAFFPNGTQ 551 600 ENSP00000269202/1-701 FRRGGGYGTS AFITHERLKS RDFIKGDDVY ILLTVEDISH LNSTQIQLTP ENSBTAP00000045584/1-700 FQRGRGRGFP NFMSQEMLKS RDFIKGDDVY ILLTVEDISH LN-TQNDPLP ENSTTRP00000010370/1-701 FQRGRGYGYS VFMTHERLKS RDFMKGDDVY ILLTVEDISH LNTTQNEPTP bmy_13027T0/1-665 FQRGSGYGNS VFMTHERLKS RDFIKGDDVY ILLTVEDISH LNTTQNEPIP BACU001577/1-786 FQRGSGYGNS VFMTHERLKS RDFIKGDDVY ILLTVEDISH LNTTQNEPIP 601 650 ENSP00000269202/1-701 APSVQDLCSK TTCKNDGVCT VRDGKAECRC QSGEDWWYMG ERCEKRGSTR ENSBTAP00000045584/1-700 TLNVNDLCTS FRCENDGICI LQNGKAECRC RSGDDWWYMG ERCEKRGSTR ENSTTRP00000010370/1-701 TLGVNDLCTN FKCENDGVCI LHNGKAECRC PSGEDWWYMG ERCEKRGSTR bmy_13027T0/1-665 TLDINDLCTG FKCENDGVCV LHHGKAECRC PSGEDWWYMG ERCEKRGSTR BACU001577/1-786 TLDINDLCTS FKCENDGVCI LHNGKAECRC PSGEDWWYMG ERCEKRGSTR 651 700 ENSP00000269202/1-701 DTIVIAVSST VAVFALMLII TLVSVYCTRK KYRERMSSNR PNLTPQNQHA ENSBTAP00000045584/1-700 DTIVIATSST AAVFALMLII TLVSVYCTRK KYRKEPSSRT VNTIMENQYA ENSTTRP00000010370/1-701 DTIVIAVSST VAVFAVMLVI TLVSVYCTRK KYHQETSSKT ANMTLENQHA bmy_13027T0/1-665 DTIVIAASST VAVFALMLII TLVSVYCTRK KYHKETGS-- -NMTLE---- BACU001577/1-786 DTIVIAASST VAVFALMLII TLVSVYCTRK KYHKETGSRT ANMTLENPSV 701 750 ENSP00000269202/1-701 F--------- ---------- ---------- ---------- ---------- ENSBTAP00000045584/1-700 L--------- ---------- ---------- ---------- ---------- ENSTTRP00000010370/1-701 L--------- ---------- ---------- ---------- ---------- bmy_13027T0/1-665 ---------- ---------- ---------- ---------- ---------- BACU001577/1-786 DVISKSSRGR LFLSSVQQML CLSSHREVAQ VDNLDAILNP SSPLLPGAVT 751 800 ENSP00000269202/1-701 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045584/1-700 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000010370/1-701 ---------- ---------- ---------- ---------- ---------- bmy_13027T0/1-665 ---------- ---------- ---------- ---------- ---------- BACU001577/1-786 PVPLVLLKVL WLQGLDLDGT KTGRHQERDG IMPSFSGILS SITFEDMTAK 801 850 ENSP00000269202/1-701 - ENSBTAP00000045584/1-700 - ENSTTRP00000010370/1-701 - bmy_13027T0/1-665 - BACU001577/1-786 T