KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:05 2014 Check: 00 .. Name: ENSP00000348300/1-223 Len: 230 Check: 7345 Weight: 1.00 Name: ENSBTAP00000045646/1-229 Len: 230 Check: 7339 Weight: 1.00 Name: ENSTTRP00000009899/1-225 Len: 230 Check: 1085 Weight: 1.00 Name: bmy_11672T0/1-135 Len: 230 Check: 2001 Weight: 1.00 Name: BACU004574/1-230 Len: 230 Check: 5005 Weight: 1.00 // 1 50 ENSP00000348300/1-223 MRDEIATTVF FVTRLVKKHD KLSKQQIEDF AEKLMTILFE TYRSHWHSDC ENSBTAP00000045646/1-229 MRDEIATTVF FVTRLVKKHD KLNKEQIEDF AEKLMTVLFE TYRNHWHSDH ENSTTRP00000009899/1-225 MRDEIATTVF FVTRLAKKHD KLSKQQIEDF AEKLMTILFK TYRSHWHSDH bmy_11672T0/1-135 -------MLY F--------- ---------- ---------- ---------- BACU004574/1-230 MRDEIATTVF FVTRLAKNHD KLSKQQIEDF AEKLMMILFE TYKSHWHADH 51 100 ENSP00000348300/1-223 PSKGQAFRCI RINNNQNKDP ILERACVESN VDFSHLGLPK EMTIWVDPFE ENSBTAP00000045646/1-229 PSKGQAFRCI RINNNQNKDP ILERACAESN VDFSYLGLPK EMTIWVDPFE ENSTTRP00000009899/1-225 PSKGQGFRCI RINNNQSKDP ILERACAESN VDFSHLGLPK EMTIWVDPFE bmy_11672T0/1-135 ---------- ---------- ---------- ---------- -------PFL BACU004574/1-230 PSKGQAFRCI RINNNQNKDP ILERACAESN VDFSHLGLPK EMTIWVDPFE 101 150 ENSP00000348300/1-223 VCCRYGEKNH PFTVASFKGR WEEWELYQQI SYAVSRASSD VSSGTSCDEE ENSBTAP00000045646/1-229 VCCRYGEKNH PFTIASFKGR WEEWKLSQQI SDAVNRATLD YSSGASSDED ENSTTRP00000009899/1-225 VCCRYGEKNH PFTIASFKDR WEEWELSQQI SDAVNRATLD YSSGTSSDEE bmy_11672T0/1-135 L--RYGEKNH PFTIASFKDR WEEWELSQQI SDAVNRATLD YSSGTSSDEE BACU004574/1-230 VCCRYGEKNH PFTIASFKDR WEEWELSQQI SDAVNRATLD YSSGTSSDEE 151 200 ENSP00000348300/1-223 SCSKEPRVIP KVSNPKSIYQ VENLKQPFQS WLQIPRKKNV VDGRVGLLGN ENSBTAP00000045646/1-229 SCNKEPQIIP KVSNPKSIYQ VENLKQPFQS WFRIPRKKNT RDGRMGLLGN ENSTTRP00000009899/1-225 SCNKEPQIIP KVRNPKSIYQ VENLKQPFQS WFHIPHKNNM GDGRMGLLGN bmy_11672T0/1-135 SCNKEPQIIP KVSNPKSIYQ VENLKQPFQS WFHIPRKKNM GDGRMGLLGN BACU004574/1-230 SCNKEPQIIP KVSNPKSIYQ VENLKQPFQS WFHNPRKKNM GDGRMGLLGN 201 250 ENSP00000348300/1-223 TYHGSQKHPK CYRPAM-HRL DRIL------ ENSBTAP00000045646/1-229 AYHALHKTPK GHRPTAGHRV DRYHWVNTH- ENSTTRP00000009899/1-225 AYHALHKIPK GHRPAAGHRV DRILQ----- bmy_11672T0/1-135 AYHALHKIPK GHRPAAGHRV DRYHWVNTHR BACU004574/1-230 VYHALHKIPK GHRPAAGHRV DRYHWVNTHR