KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:05 2014 Check: 00 .. Name: ENSBTAP00000045651/1-235 Len: 235 Check: 6516 Weight: 1.00 Name: ENSP00000356430/1-235 Len: 235 Check: 5250 Weight: 1.00 Name: bmy_20608T0/1-172 Len: 235 Check: 6587 Weight: 1.00 Name: BACU018273/1-235 Len: 235 Check: 6827 Weight: 1.00 Name: ENSTTRP00000002364/1-235 Len: 235 Check: 6120 Weight: 1.00 // 1 50 ENSBTAP00000045651/1-235 METSLVFFSQ LSMCEPKAKT IFKLIHGSGK EETSKEAKIR AKEKRNRLSL ENSP00000356430/1-235 METTLLFFSQ INMCESKEKT FFKLIHGSGK EETSKEAKIR AKEKRNRLSL bmy_20608T0/1-172 MERRLDEFSG I--------- ---------- ---------- ---------- BACU018273/1-235 METSLVFFSQ LNMCEPKEKT FFKLIYGSGK EETSKEAKIR AKEKRNRLSL ENSTTRP00000002364/1-235 METSLFFFSQ LNMCEPKEKT FFKLIYGSGK EETSKEAKIR AKEKRNRLSL 51 100 ENSBTAP00000045651/1-235 LVQKPVFYDD TPSTRSGQLA KETRVSPEEA IKWGESFDKL LSHKDGLETF ENSP00000356430/1-235 LVQKPEFHED TRSSRSGHLA KETRVSPEEA VKWGESFDKL LSHRDGLEAF bmy_20608T0/1-172 ---------- ---------- ----ISPEEA VIWGESFDKL LSHKDGLETF BACU018273/1-235 LVQKPEFHED TLSSRSGQLA KETRISPEEA VIWGESFDKL LSHKDGLETF ENSTTRP00000002364/1-235 LVQKPEFHED TLSSRSGQLA KETRISPEEA VIWGESFDKL LSHKDGLETF 101 150 ENSBTAP00000045651/1-235 TRFLKTEFSE ENIEFWIACE DFKKSKDPQQ IIRKAKAIYE KFIQNDAPQE ENSP00000356430/1-235 TRFLKTEFSE ENIEFWIACE DFKKSKGPQQ IHLKAKAIYE KFIQTDAPKE bmy_20608T0/1-172 TRFLKTEFSE ENIEFWIACE DFKKSKDPQQ IIHKAKAIYE KFIQNDAPQE BACU018273/1-235 TRFLKTEFSE ENIEFWIACE DFKKSKDPQQ IIHKAKAIYE KFIQNDAPQE ENSTTRP00000002364/1-235 TRFLKTEFSE ENIEFWIACE DFKKSKDPQQ IIHKAKAIYE KFIQNDAPQE 151 200 ENSBTAP00000045651/1-235 VNLDFHTKEI ISKSITQPTL QSFDVAQSRV YQLMEQDSYM RFLKSDIYLD ENSP00000356430/1-235 VNLDFHTKEV ITNSITQPTL HSFDAAQSRV YQLMEQDSYT RFLKSDIYLD bmy_20608T0/1-172 VNLDFHTKEI VTRSITQPTL HSFDAAQSRV YQLMEQDSYT RFLKSDIYLD BACU018273/1-235 VNLDFHTKEI VTRSITQPTL HSFDAAQSRV YQLMEQDSYT RFLKSDIYLD ENSTTRP00000002364/1-235 VNLDFHTKEI ITRSITQPTL HSFDAAQSRV YQLMEQDSYT RFLKSDIYLD 201 250 ENSBTAP00000045651/1-235 LTKGRSQRPT NLRRRSRSFT YNEFQDAKSD VAIWL ENSP00000356430/1-235 LMEGRPQRPT NLRRRSRSFT CNEFQDVQSD VAIWL bmy_20608T0/1-172 LIEGRPQRPT NLRRRSRSFT YNEFQDVKSD VAIWL BACU018273/1-235 LIEGRPQRPT NLRRRSRSFT YNEFQDVKSD VAIWL ENSTTRP00000002364/1-235 LIEGRPQRPT NLRRRSRSFT YNEFQDVKSD VAIWL