KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:06 2014 Check: 00 .. Name: ENSTTRP00000016259/1-305 Len: 421 Check: 4693 Weight: 1.00 Name: ENSP00000307449/1-386 Len: 421 Check: 6784 Weight: 1.00 Name: ENSBTAP00000045654/1-260 Len: 421 Check: 9872 Weight: 1.00 Name: bmy_22318T0/1-352 Len: 421 Check: 2755 Weight: 1.00 Name: BACU009709/1-317 Len: 421 Check: 5394 Weight: 1.00 // 1 50 ENSTTRP00000016259/1-305 ---------- ---------- ---------- ---------- ---------- ENSP00000307449/1-386 MCERAARLCR AGAHRLLREP PQQGRALGGL LRWVGARMGE PRESLAPAAP ENSBTAP00000045654/1-260 ---------- ---------- ---------- ---------- ---------- bmy_22318T0/1-352 ----MIKVC- ---------- ---------- ---------- ---------- BACU009709/1-317 ----MIKVC- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000016259/1-305 ---------- ---------- ------DGKL SLEEFQLFFA DGVLNEKELE ENSP00000307449/1-386 ADPGPASPRG GTAVILDIFR RADKNDDGKL SLEEFQLFFA DGVLNEKELE ENSBTAP00000045654/1-260 ---------- ---------- ---------- ---------- ---------- bmy_22318T0/1-352 ---------- ---------- ----GDDGKL SLEEFQLFFA DGVLNEKELE BACU009709/1-317 ---------- ---------- ----GDDGKL SLEEFQLFFA DGVLNEKELE 101 150 ENSTTRP00000016259/1-305 GLFHTIDSDN TNHVDTKELC XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000307449/1-386 DLFHTIDSDN TNHVDTKELC DYFVDHMGDY EDVLASLETL NHSVLKAMGY ENSBTAP00000045654/1-260 ---------- ---------- ------MGDY EDVLASLETL NHSVLKAMGY bmy_22318T0/1-352 GLFHTIDSDN TNHVDTKELC DYFVDHMGDY EDVLASLETL NHSVLKAMGY BACU009709/1-317 GLFHTIDSDN TNHVDTKELC DYFVDHMGDY EDVLASLETL NHSVLKAMGY 151 200 ENSTTRP00000016259/1-305 XXX------- ---------- ---------- --------XX XXXXXXXXXX ENSP00000307449/1-386 TKK------- ---------- ---------- --------VY EGGSNVDQFV ENSBTAP00000045654/1-260 TKK------- ---------- ---------- --------VY EGGSNVDQFV bmy_22318T0/1-352 TKEGHLFVQS PSITGLHIST HDPSPTPFPS VPLPFPPQVY EGGSNVDQFV BACU009709/1-317 TKE------- ---------- ---------- --------VY EGGSNVDQFV 201 250 ENSTTRP00000016259/1-305 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXQN---- -HSVVETWSG ENSP00000307449/1-386 TRFLLKETAN QIQSLLSSVE SAVEAIEEQT SQLRQNHIKP SHSAAQTWCG ENSBTAP00000045654/1-260 TRFLLKETAN QIQSLLSSVE SAVEAIEEQT SQIRQNHSRP SHGAVETWSG bmy_22318T0/1-352 TRFLLKETAN QIQSLLSSVE SAVEAIEEQT SQIRQNHSKP SHSVVETWSG BACU009709/1-317 TRFLLKETAN QIQSLLSSVE SAVEAIEEQT SQIRQNHSKP SHSVVETWSG 251 300 ENSTTRP00000016259/1-305 SSTPVYAHNH KLTAVEQGKS FPLVTSDSRE EGLEAQISRL AGLIGRLESK ENSP00000307449/1-386 SPTPASAPNH KLMAMEQGKT LPSATEDAKE EGLEAQISRL AELIGRLESK ENSBTAP00000045654/1-260 SPTPPYAPNH KLMAAEQGKS FPPGTSDPKE DGLDAQISRL AGLIGRLENK bmy_22318T0/1-352 SSTPLYAHNH KLTAVEQGKS FPLVTSDSKE EGLEAQISRL AGLIGRLESK BACU009709/1-317 SSTPLYAHNH KLTAVDQGKS FPLVTSDSKE EGLEAQISRL AGLIGRLESK 301 350 ENSTTRP00000016259/1-305 TLWFDFQQHL SDEESTNMHL QLVRQEMAVC PEQLVEFLDS LRQYLRGTAG ENSP00000307449/1-386 ALWFDLQQRL SDEDGTNMHL QLVRQEMAVC PEQLSEFLDS LRQYLRGTTG ENSBTAP00000045654/1-260 TLWFDLQQHL SDEEGTNMHL QLVRQEMAVC PEQLGDFLDS LRQYVRGTAG bmy_22318T0/1-352 TLWFDLQQHL SDEEGTNMHL QLVRQEMAVC PEQLAEFLNS LRQYLRGTAG BACU009709/1-317 TLWFDLQQHL SDEEGTNVHL QLVRQEMAVC PEQLAEFLDS LRQYLRGTAG 351 400 ENSTTRP00000016259/1-305 ARNCFHIAAV RLADGVTFVV YEFWETEEEW KMHLQSPVCK AFRHVKVDTL ENSP00000307449/1-386 VRNCFHITAV RLSDGFTFVI YEFWETEEAW KRHLQSPLCK AFRHVKVDTL ENSBTAP00000045654/1-260 TRNCFHIAAV RLADGVTFVV YEFWETEEEW KRHLQSPVCK AFRHVKVDTL bmy_22318T0/1-352 ARNCFHIAAM RLADGVTFVV YEFWETEEEW KMHLQSPVCK AFRHVKVDTL BACU009709/1-317 ARNCFHIAAV RLADGVTFVV YEFWETEEEW KMHLQSPVCK AFRHVKVDTL 401 450 ENSTTRP00000016259/1-305 SQPEALSRIS VPAAWCTLGR D ENSP00000307449/1-386 SQPEALSRIL VPAAWCTVGR D ENSBTAP00000045654/1-260 SQPEAFSRIS VPAAWCTLGR D bmy_22318T0/1-352 SQPEALSRIS VPAAWCTRGR D BACU009709/1-317 SQPEALSRIS VPAAWCTRGR D