KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:57:06 2014 Check: 00 .. Name: ENSTTRP00000012002/1-307 Len: 315 Check: 7320 Weight: 1.00 Name: bmy_11622T0/1-196 Len: 315 Check: 7476 Weight: 1.00 Name: ENSP00000250863/1-315 Len: 315 Check: 3273 Weight: 1.00 Name: ENSBTAP00000045661/1-295 Len: 315 Check: 8023 Weight: 1.00 // 1 50 ENSTTRP00000012002/1-307 --------PR GAHPTPSFPY ESAADPDTPN STISREASTQ SSSAATSQGY bmy_11622T0/1-196 ---------- ---------- ---------- ---------- ---------- ENSP00000250863/1-315 MAAPSCGGDR KARLTPSLPH ESTANPETPN STISREASTQ SSSAATSQGY ENSBTAP00000045661/1-295 ---------- ---------- MSAANPETPN STISREASTQ SSSATTSQGY 51 100 ENSTTRP00000012002/1-307 VLPEGRIMPN TVFVGGIDVR MDETEIKNFF AKYGSVKEVK IITDRSGVSK bmy_11622T0/1-196 -------MPN TIFVGGIDVR MDETEIRSFF ARYGSVKEVK IITDRTGVSK ENSP00000250863/1-315 ILPEGKIMPN TVFVGGIDVR MDETEIRSFF ARYGSVKEVK IITDRTGVSK ENSBTAP00000045661/1-295 VLPEGKIMPN TVFVGGIDVR MDETEIRSFF ARYGSVKEVK IITDRTGVSK 101 150 ENSTTRP00000012002/1-307 GXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_11622T0/1-196 GYGFVSFYND VDVQKIVESQ INLHG----- ---------- AYHVQPRPFV ENSP00000250863/1-315 GYGFVSFFND VDVQKIVESQ INFHGKKLKL GPAIRKQNLC AYHVQPRPLV ENSBTAP00000045661/1-295 GYGFVSFYND VDVQKIVESQ INFHGKKLKL GPAIRKQNLC AYHVQPRPLV 151 200 ENSTTRP00000012002/1-307 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXAYPP YPSSPVQVIT bmy_11622T0/1-196 FNPPPPPQFQ SVWSNPNTEA YMHPPTMMNP VTQYVQAYPP YPSSPVQVIT ENSP00000250863/1-315 FNHPPPPQFQ NVWTNPNTET YMQPTTTMNP ITQYVQAYPT YPNSPVQVIT ENSBTAP00000045661/1-295 FNPPPPPQFQ SVWSNPNAET YMQPPTMINP ITQYVQAYPP YPSSPVQVIT 201 250 ENSTTRP00000012002/1-307 GYQLPVYNYQ MPPQWPVGEQ RSYVISPTYT AVNYHCNEVD PGVEVLPSEC bmy_11622T0/1-196 GYQLPVYNYQ MPPQWPAGEQ RSYVIPPAYT AVNYHYNEVD PGVEVLPSEC ENSP00000250863/1-315 GYQLPVYNYQ MPPQWPVGEQ RSYVVPPAYS AVNYHCNEVD PGAEVVPNEC ENSBTAP00000045661/1-295 GYQLPVYNYQ MPPQWPAGEQ RSYVIPPAYT TINYHCNEVD TGADVLPSEC 251 300 ENSTTRP00000012002/1-307 SVHEATASSG NGPQKKSVDR SIQTVVSCLF NPENRLRSSF VTQEEYFKDK bmy_11622T0/1-196 SVLEATASSG NGPQKANI-- ---------- ---------- ---------- ENSP00000250863/1-315 SVHEATPPSG NGPQKKSVDR SIQTVVSCLF NPENRLRNSV VTQDDYFKDK ENSBTAP00000045661/1-295 SVHEATPSSG NGPQKKSVDR SIQTVVSCLF NPENRLRNSV VTQDDYFKDK 301 350 ENSTTRP00000012002/1-307 RVHHFRRSRA VLKSV bmy_11622T0/1-196 ---------- ----- ENSP00000250863/1-315 RVHHFRRSRA MLKSV ENSBTAP00000045661/1-295 RVHHFRRSRA VLKSV