KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:57:07 2014 Check: 00 .. Name: ENSP00000468778/1-504 Len: 842 Check: 462 Weight: 1.00 Name: ENSBTAP00000045720/1-503 Len: 842 Check: 6403 Weight: 1.00 Name: bmy_19398T0/1-841 Len: 842 Check: 912 Weight: 1.00 Name: ENSTTRP00000011351/1-502 Len: 842 Check: 6427 Weight: 1.00 // 1 50 ENSP00000468778/1-504 MSEK------ ------QMKE AFVSNL---- ---------- ---------- ENSBTAP00000045720/1-503 MSQK------ ------QMKE AFVSNQ---- ---------- ---------- bmy_19398T0/1-841 MREQGKLTGA SRGALGSFRA SFTTGFEVGL QIFWVSVPCR MRTLEDRDAS ENSTTRP00000011351/1-502 MSQK------ ------QMKE AFVSNH---- ---------- ---------- 51 100 ENSP00000468778/1-504 ---------- --------NG TT-------- ---------- ---------- ENSBTAP00000045720/1-503 ---------- --------NG TS-------- ---------- ---------- bmy_19398T0/1-841 CPILSSTQKC PILVQPVVSG AGRLESTFDV PGKLLCGMEV TAQSFTGKPS ENSTTRP00000011351/1-502 ---------- --------NG TS-------- ---------- ---------- 101 150 ENSP00000468778/1-504 ---------V LEITQGLC-- ------FPAF ---------- ---------- ENSBTAP00000045720/1-503 ---------V LEITEGLC-- ------LPAL ---------- ---------- bmy_19398T0/1-841 HLPHPPSFLI LSTSQGVAVK GNQPQVLPRL RRQWEGRREE QGKGPGGPAP ENSTTRP00000011351/1-502 ---------V LEITEGLC-- ------LPAL ---------- ---------- 151 200 ENSP00000468778/1-504 ---------- ---------- -----CILCR GFLIIFS--- ---------- ENSBTAP00000045720/1-503 ---------- ---------- -----CILCR GLLIILS--- ---------- bmy_19398T0/1-841 KFPAGTGTPC PREVPAGSRA GMPLRKHLAR GQYVLPGKVD VTPAKGAAAP ENSTTRP00000011351/1-502 ---------- ---------- -----CILCR GLLIIVS--- ---------- 201 250 ENSP00000468778/1-504 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045720/1-503 ---------- ---------- ---------- ---------- ---------- bmy_19398T0/1-841 TPPRASRPLP GKELGYLLLG YERVKKKRAK GGETVLWKGE GETSPSSPAP ENSTTRP00000011351/1-502 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000468778/1-504 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045720/1-503 ---------- ---------- ---------- ---------- ---------- bmy_19398T0/1-841 RGPTGLPCPF GHAKGFGPVW GWHSPVPRPE PPSVRPPPAR LERQTGGPGE ENSTTRP00000011351/1-502 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000468778/1-504 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045720/1-503 ---------- ---------- ---------- ---------- ---------- bmy_19398T0/1-841 AAGKARGGRA EAGAGDSRRG GKAGNAESQP RATVGAKWPG AGTLLPRGGA ENSTTRP00000011351/1-502 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000468778/1-504 ---------- ---------- ---------- -QYLCSFSPT WKTRFLTDFV ENSBTAP00000045720/1-503 ---------- ---------- ---------- -QQLCSSLHN SRTRFLVDFA bmy_19398T0/1-841 RTRGAECTWP VRVAGIRSWG LAPGQNILRA WEHLCSSSHT WRTRFFIDFA ENSTTRP00000011351/1-502 ---------- ---------- ---------- -QHLCCSSHT WRTRFFIDFA 401 450 ENSP00000468778/1-504 VLIVPMVATL TIWASFILLE LLGVIIFGAG LLYQIYRRRT CYARLPFLKI ENSBTAP00000045720/1-503 FLIVPLVTTL TIFSSFVLLE YLVAIILGAG LLYEIYCRRT CYARMPFQKI bmy_19398T0/1-841 FLIVPLVTTL TIFASFVLLE YLIVIIFGAG LLCETYCRRT CYARMPVGKI ENSTTRP00000011351/1-502 FLIVPLVTTL TIFASFVLLE YLIVIIFGAG LLYETYCRRT CYARMPVGKI 451 500 ENSP00000468778/1-504 LEKFLNISLE SEYNPAISCF RVITSAFTAI AILAVDFPLF PRRFAKTELY ENSBTAP00000045720/1-503 CEKFLKVSLE SEHIPAISCF RVVNSAFTAV AILAVDFPLF PRRYAKTELY bmy_19398T0/1-841 LEKFLKISLE SEYIPAISCF RVINSAFTAV AILAVDFPLF PRRFAKTELY ENSTTRP00000011351/1-502 LEKFLKISIE SEYIPAISCF RVINSAFTAV AILAVDFPLF PRRFAKTELY 501 550 ENSP00000468778/1-504 GTGAMDFGVG GFVFGSAMVC LEVRRRKYME GSKLHYFTNS LYSVWPLVFL ENSBTAP00000045720/1-503 GTGAMDYGVG GFIFGSAMVS PEV-RRKYTK GSRFCYLTKS LYSLWPLVFL bmy_19398T0/1-841 GTGAMDFGVG GFIFGTAMVC PEV-RRKYTK GSRLCYLTKS LYSVWPLVFL ENSTTRP00000011351/1-502 GTGAMDFGVG GFIFGTAMVC PEV-RRKYTK GSRL-YLTKS LYSVWPLVFL 551 600 ENSP00000468778/1-504 GIGRLAIIKS IGYQEHLTEY GVHWNFFFTI IVVKLITPLL LIIFPLNKSW ENSBTAP00000045720/1-503 GVGRLVAIKS VDYQEHLTEY GVHWNFFFTL IAVKLITSLL LIICPLNRSW bmy_19398T0/1-841 GMGRLVIIKS IGYQEHLTEY GVHWNFFFTL IVVKLITSLL LIIFPLNKSW ENSTTRP00000011351/1-502 GVGRLVIIKS IGYQEHLTEY GVHWNFFFTL IVVKLITSLL LIIFPLNKSW 601 650 ENSP00000468778/1-504 IIALGITVLY QLALDFTSLK RLILYGTDGS GTRVGLLNAN REGIISTLGY ENSBTAP00000045720/1-503 VVAISIAALY QLALDFTPLK SLILYGTDGS GTRVGLLNAN REGIISILGY bmy_19398T0/1-841 IVAISITVFY QLALDFTPLK RLVLYGSDGS GTRVGLLNAN REGIISTLGY ENSTTRP00000011351/1-502 IVAISITVFY QLALDFTPLK RLILYGSDGS GTRVGLLNAN REGISSTLGY 651 700 ENSP00000468778/1-504 VAIHMAGVQT GLYMHKNRSH IKDLIKVACF LLLAAISLFI SLYVVQVNVE ENSBTAP00000045720/1-503 VAVHMAGVQT GLYVLKKRSH IKDWIKVACC ILLTAIGLFI SLYIVQVNVE bmy_19398T0/1-841 VAIHMAGVQT GSYVLKKRSH IKDWIKVACY ILLTAIGFFI SLYIVQVNVE ENSTTRP00000011351/1-502 VAIHMAGVQT GSYVLKKRSH IKDWIKVACC ILLTAIGFFI SLYIVQVNVE 701 750 ENSP00000468778/1-504 AVSRRMANLA FCIWIVASSL ILLSSLLLGD IILSFAKFLI KGALVPCSWK ENSBTAP00000045720/1-503 VASRRMANLA FCIWIVASCL ILLSSLLLGD IILSFAKFVI KEAAVPCSWK bmy_19398T0/1-841 VASRRMANLA FCIWIVASCL ILLSSLLLGD IILNFAKFLI KGATVPCSWK ENSTTRP00000011351/1-502 VASRRMANLA FCIWIVASCL ILLSSLLLGD IILNFAKFLI KGATVPCSWK 751 800 ENSP00000468778/1-504 LIQSPVTNKK HSESLVPEAE RMEPSLCLIT ALNRKQLIFF LLSNITTGLI ENSBTAP00000045720/1-503 LIQSPTANKK HLESIVFDAK RKEPTLCLIT AMNRNQLLFF LLSNVTTGLV bmy_19398T0/1-841 LIQSPAANRK HSESLVSEAE RKEPTLCLIT AMNRNQLIFF LLSNVTTGLV ENSTTRP00000011351/1-502 IIQSPAANRK YSESLVSEAE RKEPTLCLIT AMNRNQLIFF LLSNVTTGLV 801 850 ENSP00000468778/1-504 NLMVDTLHSS TLWALFVVNL YMFSNCLIVY VLYLQDKTVQ FW ENSBTAP00000045720/1-503 NLSIDTLHSS TPWALCLLNL YMFTNCLIIY VLHLQDKTIK FW bmy_19398T0/1-841 NLLVDTLHSS TLWALFVLNL YMFTNCLVIY VLHLQDKTVK FW ENSTTRP00000011351/1-502 NLLVDTLHSS TLWALFVLNL YMFTNCLVIY VLHLQDKTVK FW