KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:08 2014 Check: 00 .. Name: ENSTTRP00000008527/1-434 Len: 532 Check: 682 Weight: 1.00 Name: ENSP00000166345/1-432 Len: 532 Check: 6514 Weight: 1.00 Name: ENSBTAP00000045731/1-432 Len: 532 Check: 7081 Weight: 1.00 Name: BACU014736/1-509 Len: 532 Check: 7628 Weight: 1.00 Name: bmy_05109T0/1-314 Len: 532 Check: 9028 Weight: 1.00 // 1 50 ENSTTRP00000008527/1-434 ----MDEAEG DLKLDXXXXX XXXXXXXXXX XXXXXXXTAK REDLKLSVRK ENSP00000166345/1-432 ----MDEAVG DLK--QALPC VAESPTVHVE VHQRGSSTAK KEDINLSVRK ENSBTAP00000045731/1-432 ----MDEAVG DLK--QALPC VAEAPTVHVE VHQRSGSTAK KEDIKLSVRK BACU014736/1-509 MGTWGTEPLG GFP------- ---------- ------STAK KEDIKLSVRK bmy_05109T0/1-314 ------EAVG DLK--QALPC VAEAPTVHVE VHQRSGSTAK TEDLKLSVRK 51 100 ENSTTRP00000008527/1-434 LLTRHNIVFG DYTWTEFDEP FLARNVQSVS IVDTELQTKG PQPVDLSMCT ENSP00000166345/1-432 LLNRHNIVFG DYTWTEFDEP FLTRNVQSVS IIDTELKVKD SQPIDLSACT ENSBTAP00000045731/1-432 LLNRHNIVFG DYTWSEFDEP FLTRNVQSVS IVDTELKAKD PQPIDLSACN BACU014736/1-509 LLNRHNIVFG DYAWTEFDEP FLTRNVQSVS IVDTELKAKD PQPIDLSTCT bmy_05109T0/1-314 LLNRHNIVFG DYAWTEFDEP FLTRNVQSVS IVDTELKAKD PQPIDLSTCT 101 150 ENSTTRP00000008527/1-434 IALHIFQLNE DGPSSENLEE ETENIVAANH WVLPAAEFHG LWDSLVYDVE ENSP00000166345/1-432 VALHIFQLNE DGPSSENLEE ETENIIAANH WVLPAAEFHG LWDSLVYDVE ENSBTAP00000045731/1-432 IALHIFQLNE DGPSSENLEE ETENIIAANH WVLPAAEFHG LWDSLVYDME BACU014736/1-509 IALHIFQLNE DGPSSENLEE ETENIIAANH WVLPAAEFHG LWDSLVYDVE bmy_05109T0/1-314 IALHIFQLNE DGPSSENLEE ETENIIAANH WVLPAVEFHG LWDSLVYDVE 151 200 ENSTTRP00000008527/1-434 IKSHLLDYVM TTLLFSDKNV DSTLITWNRV VLLHGPPGTG KTSLCKALAQ ENSP00000166345/1-432 VKSHLLDYVM TTLLFSDKNV NSNLITWNRV VLLHGPPGTG KTSLCKALAQ ENSBTAP00000045731/1-432 VKSHLLDYVM TTLLFSDKNV DSNLITWNRV VLLHGPPGTG KTSLCKALAQ BACU014736/1-509 VKSHLLDYVM TTLLFSDKKV NSNLITWNRV VLLHGPPGTG KTSLCKALAQ bmy_05109T0/1-314 VKSHLLDYVM TTLLFSDKKV DSNLITWNRV VLLHGPPGTG KTSLCKALAQ 201 250 ENSTTRP00000008527/1-434 KLTIRLSSRY RYGQLIEINS HSLFSKWFSE ---------- ---------- ENSP00000166345/1-432 KLTIRLSSRY RYGQLIEINS HSLFSKWFSE ---------- ---------- ENSBTAP00000045731/1-432 KLTIRLSSRY RYGQLVEINS HSLFSKWFSE ---------- ---------- BACU014736/1-509 KLTIRLSSRY RYGQLIEINS HSLFSKWFSE SGKLVTRMFQ KIQDLIDDKD bmy_05109T0/1-314 KLTIRLSSRY RYGQLIEINS HSLFSKWFSE ---------- ---------- 251 300 ENSTTRP00000008527/1-434 ---------- ---------- ---------- ---------- ---------- ENSP00000166345/1-432 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045731/1-432 ---------- ---------- ---------- ---------- ---------- BACU014736/1-509 ALVFVLIDEV ESLTAARNAC RACAEPSDAI RVVNAVLTQI DQIKRPGFSG bmy_05109T0/1-314 ---------- ---------- ---------- ---------- ---------- 301 350 ENSTTRP00000008527/1-434 ---------- ---------- ----SGKLVT RMFQKIQDLI DDKDALVFVL ENSP00000166345/1-432 ---------- ---------- ----SGKLVT KMFQKIQDLI DDKDALVFVL ENSBTAP00000045731/1-432 ---------- ---------- ----SGKLVT RMFQKIQDLI DDKDALVFVL BACU014736/1-509 SGSFPRGRQE TVGSWGHLGS EQSQSGKLVT RMFQKIQDLI DDKDALVFVL bmy_05109T0/1-314 ---------- ---------- ---------- ---------- ---------- 351 400 ENSTTRP00000008527/1-434 IDEVESLTAS RNACRAGAEP SDAIRVVNAV LTQIDQIKRH SNVVILTTSN ENSP00000166345/1-432 IDEVESLTAA RNACRAGTEP SDAIRVVNAV LTQIDQIKRH SNVVILTTSN ENSBTAP00000045731/1-432 IDEVESLTAS RNACRAGTEP SDAIRVVNAV LTQIDQIKRH SNVVILTTSN BACU014736/1-509 IDEVESLTAA RNACRAGAEP SDAIRVVNAV LTQIDQIKRH SNVVILTTSN bmy_05109T0/1-314 ---------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000008527/1-434 ITERIDVAFV DRADIRQYIG PPSAAAIFRI YLSCLEELMR CQIVYPRQQL ENSP00000166345/1-432 ITEKIDVAFV DRADIKQYIG PPSAAAIFKI YLSCLEELMK CQIIYPRQQL ENSBTAP00000045731/1-432 ITERIDVAFV DRADIRQYIG PPSAAAIFKI YLSCLEELMR CQIIYPRQQL BACU014736/1-509 ITERIDVAFV DRADIRQYIG PPSAAAIFRI YLSCLEELMR CQIIYPRQQL bmy_05109T0/1-314 ---------- ---------- ---------- ---------- CQIIYPRQQL 451 500 ENSTTRP00000008527/1-434 LTLRELEMIG FIENNVSKLS LLLSEISRKS EGLSGRVLRK LPFLAHALYV ENSP00000166345/1-432 LTLRELEMIG FIENNVSKLS LLLNDISRKS EGLSGRVLRK LPFLAHALYV ENSBTAP00000045731/1-432 LTLRELEMIG FIENNVSKLS LLLSEISRKS EGLSGRVLRK LPFLAHALYI BACU014736/1-509 LTLRELEMIG FIENNVSKLS LLLSEISRKS EGLSGRVLRK LPFLAHALYI bmy_05109T0/1-314 LTLRELEMIG FIENNVSKLS LLLSEISRKS EGLSGRVLRK LPFLAHALYV 501 550 ENSTTRP00000008527/1-434 QAPTITVEGF LQALSLAVDK QFEDRKKLSS CV ENSP00000166345/1-432 QAPTVTIEGF LQALSLAVDK QFEERKKLAA YI ENSBTAP00000045731/1-432 QAPTVTIEGF LQALSLAVEK QFEERKKLSS CV BACU014736/1-509 QAPSITIEGF LQALSLAVDK QFEDRKKLSS CV bmy_05109T0/1-314 QAPSITIEGF LQALSLAVDK QFEDRKKLSS CV