KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:11 2014 Check: 00 .. Name: BACU014734/1-587 Len: 735 Check: 455 Weight: 1.00 Name: ENSTTRP00000014050/1-239 Len: 735 Check: 7818 Weight: 1.00 Name: bmy_05110T0/1-310 Len: 735 Check: 5151 Weight: 1.00 Name: ENSP00000296849/1-451 Len: 735 Check: 4293 Weight: 1.00 Name: ENSBTAP00000045759/1-337 Len: 735 Check: 6387 Weight: 1.00 // 1 50 BACU014734/1-587 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014050/1-239 ---------- ---------- -DSFVVSAYL GGRRGTEEAE RRTRDKQGLP bmy_05110T0/1-310 ---------- ---------- ---------- ---------- --------MP ENSP00000296849/1-451 MGKLQSKHAA AARKRRESPE GDSFVASAYA SGRKGAEEAE RRARDKQELP ENSBTAP00000045759/1-337 ---------- ---------- ---------- ---------- -------ELL 51 100 BACU014734/1-587 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000014050/1-239 GGDPKEGPFR DDPCPLEXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_05110T0/1-310 SESVRQAAWR RQQAVW---- ---------- ---------- ---VGRSSPR ENSP00000296849/1-451 NGDPKEGPFR EDQCPLQVAL PAEKAEGREH PGQLLSADDG ERAANREGPR ENSBTAP00000045759/1-337 GGDLREGPFR DNQCPLEVML PPEKAEACEG PGQLFCVDDG ERAASREGAR 101 150 BACU014734/1-587 ---------- ---------- ---------- ---------- ---MSSLMHT ENSTTRP00000014050/1-239 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXDMSSLMHT bmy_05110T0/1-310 S--------- ACVHDV---- ---------- -------RAR PQDMSSLMHT ENSP00000296849/1-451 GPGGQRLNID ALQCDVSVEE DDRQEWTFTL YDFDNCGKVT REDMSSLMHT ENSBTAP00000045759/1-337 GLGKRRLNVD AVQCDVSVEE DDHQEWTFTL YGFDNSGKAT REDMSSLMHT 151 200 BACU014734/1-587 IYEVVDASVN HSSGSSKTLR VKLTVSPEPS SKRKEGPPAG QDREPTRCRM ENSTTRP00000014050/1-239 IYEVVDASVN HSSGRSKTLR VKLTVSPEPS SKRKDGPPAS QDREPTRCRM bmy_05110T0/1-310 IYEVVDASVN HSSGSSKTLR VKLTVSPEPS SKRKEGPPAG QGGPA----- ENSP00000296849/1-451 IYEVVDASVN HSSGSSKTLR VKLTVSPEPS SKRKEGPPAG QDREPTRCRM ENSBTAP00000045759/1-337 IYEVVDASVH RCSGSSKTLR VKLTVSPEPS SKRKDGPPAA QDREASRCRA 201 250 BACU014734/1-587 EAELPEDPRV ADKRLSTHIR RPTADPHPCS ERGLYCVDEN TERRNHYLDL ENSTTRP00000014050/1-239 EGELPEDPRV ADKRLSTHIR RPTADPQPCP ERGPYCVDES TER-DHYLHL bmy_05110T0/1-310 ---------- ---------- -PTPSPAPSG GRTAW----T RTRSGGTTTW ENSP00000296849/1-451 EGELAEEPRV ADRRLSAHVR RPSTDPQPCS ERGPYCVDEN TERRNHYLDL ENSBTAP00000045759/1-337 EAELSEDPRV ADRRLSAHVR RPNADPHPCS ERGPYCVDEN TERRNHYLDL 251 300 BACU014734/1-587 AGIENYASKF GPGSPPAQAR QEPPARAAHP QGRSRSQESD AHAAHHRRXX ENSTTRP00000014050/1-239 AGIENYVSKF G--------- ---------- ---------- ---------- bmy_05110T0/1-310 TWQESRTTRL SSD----QAR QEPPARAAHP QGRSRSQESD THAAHHRR-- ENSP00000296849/1-451 AGIENYTSRF GPGSPPVQAK QEPQGRASHL QARSRSQEPD THAVHHRR-- ENSBTAP00000045759/1-337 AGIENYASKF GPGSPPTQAR PEPPARASHP QGRSRSQESD VHAAHHRR-- 301 350 BACU014734/1-587 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000014050/1-239 ---------- ---------- ---------- ---------- ---------- bmy_05110T0/1-310 ---------- ---------- ---------- ---------- ---------- ENSP00000296849/1-451 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045759/1-337 ---------- ---------- ---------- ---------- ---------- 351 400 BACU014734/1-587 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000014050/1-239 ---------- ---------- ---------- ---------- ---------- bmy_05110T0/1-310 ---------- ---------- ---------- ---------- ---------- ENSP00000296849/1-451 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045759/1-337 ---------- ---------- ---------- ---------- ---------- 401 450 BACU014734/1-587 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000014050/1-239 ---------- ---------- ---------- ---------- ---------- bmy_05110T0/1-310 ---------- ---------- ---------- ---------- ---------- ENSP00000296849/1-451 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045759/1-337 ---------- ---------- ---------- ---------- ---------- 451 500 BACU014734/1-587 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000014050/1-239 ---------- ---------- ---------- ---------- ---------- bmy_05110T0/1-310 ---------- ---------- ---------- ---------- ---------- ENSP00000296849/1-451 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045759/1-337 ---------- ---------- ---------- ---------- ---------- 501 550 BACU014734/1-587 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000014050/1-239 ---------- ---------- ---------- ---------- ---------- bmy_05110T0/1-310 ---------- ---------- ---------- ---------- ---------- ENSP00000296849/1-451 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045759/1-337 ---------- ---------- ---------- ---------- ---------- 551 600 BACU014734/1-587 XXXXXXCGAG GARLVTGPGW PGALWLLWLV HAEPGRGGSG QSLLGATCAV ENSTTRP00000014050/1-239 ---------- ---------- ---------- ---------- ---------- bmy_05110T0/1-310 ---------- -CLGLAEPAL LAAEPVPRAL DLPPRPKGPE RPFL------ ENSP00000296849/1-451 ---------- -SQVLVEHVV PASEPAARAL DTQPRPKGPE KQFL------ ENSBTAP00000045759/1-337 ---------- -CPGLAEFAL PAAEPLPRAL DLPPRPKGPE RPFL------ 601 650 BACU014734/1-587 ASSSVRGRHG SRGRRGATRG ARGAAGVQRG GGESQEEGRP GRATGGAPST ENSTTRP00000014050/1-239 ---------- ---------- ---------- ---------- ---------- bmy_05110T0/1-310 ---------- -RSPQGSGRP PGAPGGGRPG RA-FSFHPPA PQAQAPPQDG ENSP00000296849/1-451 ---------- -KSPKGSGKP PGVPASSKSG KA-FSYYLPA VLPPQAPQDG ENSBTAP00000045759/1-337 ---------- -RSPQGSGRP PGAPSGLRPG RSTTTTTTTT TMRPRAPARP 651 700 BACU014734/1-587 LRGHRWPAGP GQCGRPRDTR AARQEAGVNR RVPDTASALE MRDSLWEAGK ENSTTRP00000014050/1-239 ---------- ---------- ---------- ---------- ---------- bmy_05110T0/1-310 HHVPQSL--P PPYGHRRCRQ RGREGHSPLK AAPGQPAAPE -HEAVRELPP ENSP00000296849/1-451 HHLPQPP--P PPYGHKRYRQ KGREGHSPLK APHAQPATVE -HEVVRDLPP ENSBTAP00000045759/1-337 PRGPRPWVSP PPRG------ ---------- ---------- ---------- 701 750 BACU014734/1-587 RAAGEQEVWV SWNLGPRIPQ RQDMPRLRLR ----- ENSTTRP00000014050/1-239 ---------- ---------- ---------- ----- bmy_05110T0/1-310 ALPGEAYAVP AVQRHEHHHH HEHHHHHHHH --HPA ENSP00000296849/1-451 TPAGEGYAVP VIQRHEHHHH HEHHHHHHHH HFHPS ENSBTAP00000045759/1-337 ---------- ---------- ---------- -----