KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:13 2014 Check: 00 .. Name: ENSBTAP00000045819/1-368 Len: 728 Check: 1900 Weight: 1.00 Name: ENSP00000248248/1-547 Len: 728 Check: 4305 Weight: 1.00 Name: ENSTTRP00000012913/1-548 Len: 728 Check: 7401 Weight: 1.00 Name: bmy_09041T0/1-559 Len: 728 Check: 6361 Weight: 1.00 Name: BACU009747/1-690 Len: 728 Check: 1134 Weight: 1.00 // 1 50 ENSBTAP00000045819/1-368 ---------- ---------- ---------- ---------- ---------- ENSP00000248248/1-547 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012913/1-548 ---------- ---------- ---------- ---------- ---------- bmy_09041T0/1-559 ---------- ---------- ---------- ---------- ---------- BACU009747/1-690 MHPSCLLAFP LLPALSTPCN ACTCKIQHPQ TFYCMSDVIV TADILEQGND 51 100 ENSBTAP00000045819/1-368 ---------- ---------- ---------- ---------- ---------- ENSP00000248248/1-547 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012913/1-548 ---------- ---------- ---------- ---------- ---------- bmy_09041T0/1-559 ---------- ---------- ---------- ---------- --MMTPELPM BACU009747/1-690 TVLKRSYRIN ITEVLKFPRK VPKINYVYTP KDWDSCGYEV RTFQASQLPI 101 150 ENSBTAP00000045819/1-368 ---------- ---------- ---------- ---------- ---------- ENSP00000248248/1-547 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012913/1-548 ---------- ---------- ---------- ---------- ---------- bmy_09041T0/1-559 ---------- ---------- ---------- ---------- ---------- BACU009747/1-690 ADDRKKVEQK MKGWQSPGRR GKEQKDSRWS KQQQVKQGSV PEAQRTLMQL 151 200 ENSBTAP00000045819/1-368 ---------- ---------- ------MVE- ---------- ---------- ENSP00000248248/1-547 ---------- ---------- -------MEV GGDTAAPAPG GAEDLEDTQF ENSTTRP00000012913/1-548 ---------- ---------- -------MEA GGGTAAPAPG DAEDLEEMRF bmy_09041T0/1-559 ---------- ---------- ----DVQMEA GGGTAAPAPG DAEDLEEMRF BACU009747/1-690 KNPLGLPILQ HSVLETTQRA EDLTDVQMEA GGGTAAPAPG DAEDLEEMRF 201 250 ENSBTAP00000045819/1-368 ---------G FTRTYP---- ---------- ---------I LEMQA----- ENSP00000248248/1-547 PSEEAREGGG VHAVPPDPED EGLEETGSKD KDQPPSPSPP PQSEALSSTS ENSTTRP00000012913/1-548 PSGEARDGGG ICRDLPGTGD ASVEKTGSET KDQP--PGLL LQSEAPSCTY bmy_09041T0/1-559 PSEEARDGGG ICRDLPGTGD AXVGKTGSET KDQP--PGLL LQSEAPSCTY BACU009747/1-690 PSEEARDGGG ICRDLPGTGD ASVEKTGSET KNQP--PGLL LQPEAPSCTY 251 300 ENSBTAP00000045819/1-368 --W------- ---------- -------RKQ DLRPRTSH-- ---------- ENSP00000248248/1-547 RLWSPAAPEN SPTCSPESSS GGQGGDPSDE EWRSQRKHVF VLSEAGKPIY ENSTTRP00000012913/1-548 GLWGPAASEN SPVGGPESGS GGQGGDPSDE DWRSKRKHVF VLSEAGKPIY bmy_09041T0/1-559 GLWGPAASEN SPVGGPESGS GGQGGDPSDE DWRSKRKHVF VLSEAGKPIY BACU009747/1-690 GLWGPGASEN SPVGGPESGS GGQGGDPSDE DWRSKRKHVF VLSEAGKPIY 301 350 ENSBTAP00000045819/1-368 ---------- ---------- ---------- ---------- --------LA ENSP00000248248/1-547 SRYGSVEALS ATMGVMTALV SFVQSAGDAI RAIYAEDHKL VFLQQGPLLL ENSTTRP00000012913/1-548 SRYGSVEALS TTMGVMTALV SFVQSAGDAI RAIYAEDHKL VFLQQGPLLL bmy_09041T0/1-559 SRYGSVEALS TTMGVMTALX SFVQSAGDAI RAIYAEDHKL VFLQQGPLLL BACU009747/1-690 SRYGSVEALS TTMGVMTALV SFVQSAGDAI RAIYAEDHKL VFLQQGPLLL 351 400 ENSBTAP00000045819/1-368 CCSSQRLHHA PMGSGAPRPL RAVLWAALRL APGAR----- ---------A ENSP00000248248/1-547 VAMSRTSQSA AQLRGELLAV HAQIVSTLTR ASVARIFAHK QNYDLRRLLA ENSTTRP00000012913/1-548 VAVSRTPQSV AQLRGELMAV HAQIVSTLTR ASVARIFARK QNYDLRRLLA bmy_09041T0/1-559 VAVSRTPQSA AQLRGELMAV HAQIVSTLTR ASVARIFARK QNYDLRRLLA BACU009747/1-690 VAVSRTPQSA AQLRGELMAV HAQIVSTLTR ASVARIFARK QNYDLRRLLA 401 450 ENSBTAP00000045819/1-368 GT-------- ------PGPC CWAPCAACLW LAR------- -----CTAPG ENSP00000248248/1-547 GSERTLDRLL DSMEQDPGAL LLG-AVRCVP LARPLRDALG ALLRRCTAPG ENSTTRP00000012913/1-548 GSERTLDRLL DSVERDPGAL LLG-AVRCVP LARPLRDALG ALLRRCTAPG bmy_09041T0/1-559 GSERTLDRLL DSVERDPGAL LLG-AVRCVP LARPLRDALG ALLRRCTAPG BACU009747/1-690 GSERTLDRLL DSVERDPGAL LLG-AVRCVP LARPLRDALG ALLR------ 451 500 ENSBTAP00000045819/1-368 LALSVLAVGG RLVTAAQERT VLAECRLDPA DLQLLLDWVG APAFAAGEAW ENSP00000248248/1-547 LALSVLAVGG RLITAAQERN VLAECRLDPA DLQLLLDWVG APAFAAGEAW ENSTTRP00000012913/1-548 LALSVLAVGG RLVTAAQERT VLAECRLDPA DLQLLLDWVG APAFAAGEAW bmy_09041T0/1-559 LALSVLAVGG RLVTAAQERT VLAECRLDPA DLQLLLDWVG APAFAAGEAW BACU009747/1-690 ---------- ---------- ---------P DLQLLLDWVG APAFAAGEAW 501 550 ENSBTAP00000045819/1-368 APVCLPRFNP DGFFYAYVAR LDAMPVCLLL LGTDPEAFHD MATCRRLVEE ENSP00000248248/1-547 APVCLPRFNP DGFFYAYVAR LDAMPVCLLL LGTQREAFHA MAACRRLVED ENSTTRP00000012913/1-548 APVCLPRFNP DGFFYAYVAR LDALPVCLLL LGTDPEAFHD MATCRRLVED bmy_09041T0/1-559 APVCLPRFNP DGFFYAYVAR LDAMPVCLLL LGTDPEAFHD MATCRRLVED BACU009747/1-690 APVCLPRFNP DGFFYAYVAR LDAMPVCLLL LGTDPEAFHD MATCRRLVED 551 600 ENSBTAP00000045819/1-368 GMHSLRAMRA LREAASFSNA ASASASAYSV QAVGAPGLRH FLYKPLDIPD ENSP00000248248/1-547 GMHALGAMRA LGEAASFSNA SSASAPAYSV QAVGAPGLRH FLYKPLDIPD ENSTTRP00000012913/1-548 GMHSLGAMRT LREAASFSNT PSAGASAYSV QAVEAAGLRH FLYKPLDIPD bmy_09041T0/1-559 GMHSLGAMRT LREAASFSST PSASASAYSV QAVEAAGLRH FLYKPLDIPD BACU009747/1-690 GMHSLGAMRT LREAASFSST PSASASAYSV QAVEAAGLRH FLYKPLDIPD 601 650 ENSBTAP00000045819/1-368 HHRQLPQFTS PELEAPYSRE EERQRLSDLY HRLHARLHSP SRPLRLIYHV ENSP00000248248/1-547 HHRQLPQFTS PELEAPYSRE EERQRLSDLY HRLHARLHST SRPLRLIYHV ENSTTRP00000012913/1-548 HHRQLPQFTX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_09041T0/1-559 HHRQLPQFTS PELEAPYSRE EERQRLSDLY HRLHARLHNT SRPLRLIYHV BACU009747/1-690 HHRQLPQFTS PELEAPYSRE EERQRLSDLY HRLHARLHNT SRPLRLIYHV 651 700 ENSBTAP00000045819/1-368 AEKETLLAWV TSKFELYTCL SPLVTKAGAI LAVTKLLRWV KKEEDWLFIR ENSP00000248248/1-547 AEKETLLAWV TSKFELYTCL SPLVTKAGAI LVVTKLLRWV KKEEDRLFIR ENSTTRP00000012913/1-548 XXXXXXXXXV TSKFELYTCL SPLVTKAGAI LVVTKLLRWV KKEEDRLFIR bmy_09041T0/1-559 AEKETLLAWV TSKFELYTCL SPLVTKAGAI LVVTKLLRWV KKEEDRLFIR BACU009747/1-690 AEKETLLAWV TSKFELYTCL SPLVTKAGAI LVVTKLLRWV KKEEDRLFIR 701 750 ENSBTAP00000045819/1-368 YPPKYSTPPA APAASTDQAS HNGLFTGP ENSP00000248248/1-547 YPPKYSTP-- -PATSTDQAA HNGLFTGL ENSTTRP00000012913/1-548 YPPKYSTPPA APAAFADQAS HNGLFTGP bmy_09041T0/1-559 YPPKYSTPPA APAASTDQAS HNGLFTGP BACU009747/1-690 YPPKYSTPPA APAASTDQAS HNGLFTAP