KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:14 2014 Check: 00 .. Name: BACU000391/1-257 Len: 507 Check: 4839 Weight: 1.00 Name: bmy_21257T0/1-419 Len: 507 Check: 6594 Weight: 1.00 Name: ENSP00000340823/1-249 Len: 507 Check: 9481 Weight: 1.00 Name: ENSTTRP00000002558/1-242 Len: 507 Check: 4784 Weight: 1.00 Name: ENSBTAP00000045836/1-249 Len: 507 Check: 9129 Weight: 1.00 // 1 50 BACU000391/1-257 MASRGSRPKP QSVPLSLEGI QQNQRVWLVK LPKYLSQQWS EASGSGEVGK bmy_21257T0/1-419 MEERGE---- ----LSLTGA KQNTGVWLVK VPKYLSQQWA KGPGRGEVGK ENSP00000340823/1-249 MAERGE---- ----LDLTGA KQNTGVWLVK VPKYLSQQWA KASGRGEVGK ENSTTRP00000002558/1-242 MAERGE---- ----LDLTGA KQNTGVWLVK VPKYLSQQWT KAPGRGEVGK ENSBTAP00000045836/1-249 MAERGE---- ----LDLTGA KQNTGVWLVK VPKYLSQQWA KAPGRGEVGK 51 100 BACU000391/1-257 LQIAKNQGKS EISFILNKEL TDIRGTDGQP APVVAPREHQ LVLQGVRGQV bmy_21257T0/1-419 LRIAKNQGRM EVSFTLNEAL ANIHDIGGKS GSGSAPRVHI FVLQSVGGHT ENSP00000340823/1-249 LRIAKTQGRT EVSFTLNEDL ANIHDIGGKP ASVSAPREHP FVLQSVGGQT ENSTTRP00000002558/1-242 LRIA------ -VSFTLNEDL ANIHDIGGKP ASVSAPREHP FVLQSVGGQT ENSBTAP00000045836/1-249 LRIAKNQGRT EVSFTLNEDL ANIHDIGGKP ASVSAPREHP FVLQSVGGQT 101 150 BACU000391/1-257 LTALTERAPD QLSLEGTVVH RGECRPALSE NYMRLKRRQI EESSKPARTV bmy_21257T0/1-419 LTVSTESSSD KLSLEGIVL- ---------- ----LRNINI ---------- ENSP00000340823/1-249 LTVFTESSSD KLSLEGIVVQ RAECRPAASE NYMRLKRLQI EESSKPVRLS ENSTTRP00000002558/1-242 LTVFTESSSD KLSLEGIVVQ RAECRPAASE NYMRLKRLQI EESSKPVRLS ENSBTAP00000045836/1-249 LTVFTESSSD KLSLEGIVVQ RAECRPAANE NYMRLKRLQI EESSKPVRLS 151 200 BACU000391/1-257 QKLEKVVTTN YKPVANHQYN IEYEKKKKEN GKRVKADKDQ VLTLLFAAFE bmy_21257T0/1-419 ---------- ---------- ---------- ---------- ---------- ENSP00000340823/1-249 QQLDKVVTTN YKPVANHQYN IEYERKKKED GKRARADKQH VLDMLFSAFE ENSTTRP00000002558/1-242 QQLDKVVTTN YKPVANHQYN IEYERKKKED GKRARADKQH VLDMLFSAFE ENSBTAP00000045836/1-249 QQLDKVVTTN YKPVANHQYN IEYERKKKED GKRARADKQH VLDMLFSAFE 201 250 BACU000391/1-257 KHQYYNIKDL VGITMQPVVY LKEILNEIGV RNVKGPHKNT WELKAEYRYY bmy_21257T0/1-419 -----NLKDL VDITKQPVSY LKEILKEIGI QNVKGIHKNT WELKPEYRHY ENSP00000340823/1-249 KHQYYNLKDL VDITKQPVVY LKEILKEIGV QNVKGIHKNT WELKPEYRHY ENSTTRP00000002558/1-242 KHQYYNLKDL VDITKQPVSY LKEILKEIGI QNVKGIHKNT WELKPEYRHY ENSBTAP00000045836/1-249 KHQYYNLKDL VDITKQPVSY LKDILKEIGV QNVKGIHKNT WELKPEYRHY 251 300 BACU000391/1-257 LAAAKSE--- ---------- ---------- ---------- ---------- bmy_21257T0/1-419 QGGEKSSRLP TFMLPSLYIE SYTRELDMAK ISSVISNKEE RYTYLASPEV ENSP00000340823/1-249 QGEEKSD--- ---------- ---------- ---------- ---------- ENSTTRP00000002558/1-242 QVEEKSD--- ---------- ---------- ---------- ---------- ENSBTAP00000045836/1-249 QVEEKSD--- ---------- ---------- ---------- ---------- 301 350 BACU000391/1-257 ---------- ---------- ---------- ---------- ---------- bmy_21257T0/1-419 ILQHGKCTNV IASRGKDERY VEGGRRWMGS RSMRNEVWEV FSGKIKIITR ENSP00000340823/1-249 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002558/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045836/1-249 ---------- ---------- ---------- ---------- ---------- 351 400 BACU000391/1-257 ---------- ---------- ---------- ---------- ---------- bmy_21257T0/1-419 PSESCFIATG RNDQNGTLFM REQLVGPFQF YSCTNSFFKG QFWAMYTNFY ENSP00000340823/1-249 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002558/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045836/1-249 ---------- ---------- ---------- ---------- ---------- 401 450 BACU000391/1-257 ---------- ---------- ---------- ---------- ---------- bmy_21257T0/1-419 NNSFPQSLND LPSKENYKEE ILKKETHIHS QPARQSGNMK DFVVLGIVQG ENSP00000340823/1-249 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002558/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045836/1-249 ---------- ---------- ---------- ---------- ---------- 451 500 BACU000391/1-257 ---------- ---------- ---------- ---------- ---------- bmy_21257T0/1-419 KSQRWKDLHA SKSPSSELFF RLHPVLPLFV PNDKVLAPLL QLLMRSGTAS ENSP00000340823/1-249 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000002558/1-242 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045836/1-249 ---------- ---------- ---------- ---------- ---------- 501 550 BACU000391/1-257 ------- bmy_21257T0/1-419 IAGPYLH ENSP00000340823/1-249 ------- ENSTTRP00000002558/1-242 ------- ENSBTAP00000045836/1-249 -------