KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:15 2014 Check: 00 .. Name: ENSTTRP00000010150/1-376 Len: 582 Check: 6194 Weight: 1.00 Name: bmy_13528T0/1-399 Len: 582 Check: 9879 Weight: 1.00 Name: BACU006878/1-286 Len: 582 Check: 2954 Weight: 1.00 Name: ENSBTAP00000045872/1-435 Len: 582 Check: 6832 Weight: 1.00 Name: ENSP00000297431/1-435 Len: 582 Check: 7084 Weight: 1.00 // 1 50 ENSTTRP00000010150/1-376 ---------- ---------- ---------- ---------- ---------- bmy_13528T0/1-399 ---------- ---------- ---------- ---------- ---------- BACU006878/1-286 ---------- ---------- ----RHHFSF PSIFIYGHTA SGKTYVTQTL ENSBTAP00000045872/1-435 MPHLENMVLC RESQVSTLQS LFGERHHFSF PSIFIYGHTA SGKTYVTQTL ENSP00000297431/1-435 MPHLENVVLC RESQVSILQS LFGERHHFSF PSIFIYGHTA SGKTYVTQTL 51 100 ENSTTRP00000010150/1-376 -----LPHVF VNCVECFTLR LLLEQILNKL NHLSSSEGEY STQITCETFN bmy_13528T0/1-399 ---------- ---------- ---------- ---------- ---------- BACU006878/1-286 LKTLELPHVF VNCVECFTLR LLLEQILNKL NHLSSSEGEC STQITCETFN ENSBTAP00000045872/1-435 LRSLELPHVF VNCVECFTLR LLLEQILNKL NHLSSSESEC STHITCEIFN ENSP00000297431/1-435 LKTLELPHVF VNCVECFTLR LLLEQILNKL NHLSSSEDGC STEITCETFN 101 150 ENSTTRP00000010150/1-376 DFVRLFKQIT KAESLKDQTV YIVLDKAEYL RDMEAYLLPG FLRLQELTDR bmy_13528T0/1-399 ---------- -------MSV YLT------- ---------- ------LTDR BACU006878/1-286 DFVRLFKQIT KAESLKDQTV YIVLDKAEYL RDMEAYLLPG FLRLQELTDR ENSBTAP00000045872/1-435 DFVRLFKRIT EAENLKDQTV YIVLDKAEYL RDMEANLLPG FLRLQELTGR ENSP00000297431/1-435 DFVRLFKQVT TAENLKDQTV YIVLDKAEYL RDMEANLLPG FLRLQELADR 151 200 ENSTTRP00000010150/1-376 NVTVIFLSEI VWEKFRPNTG CFEPFVLYFP DYSIXXXXXX XXXXXXXXXX bmy_13528T0/1-399 NVTVIFLSEI VWEKFRPNTG CFEPFVLYFP DYSIGNLQKI LSHDHPPEYS BACU006878/1-286 NVTVIFLSEI VWEKFRPNTG CFEPFVLYFP DYSIGNLQKI LSHDHPPEYS ENSBTAP00000045872/1-435 NVTVIFLSEI VWEKFRPNTG CFEPFVLYFP DYSIGNLQKI LSHDHPPEYS ENSP00000297431/1-435 NVTVLFLSEI VWEKFRPNTG CFEPFVLYFP DYSIGNLQKI LSHDHPPEYS 201 250 ENSTTRP00000010150/1-376 XXXXXXXXXX XXXXXXXXXR DLKELRHL-- ---------- ------AVLN bmy_13528T0/1-399 ADFYAAYINI LLGVFYTVCR DLKELRHLKM FNFIKIKMKM NRKVVYAVLN BACU006878/1-286 ADFYAAYINI LLGVFYTVCR DLKELRHL-- ---------- ------AVLN ENSBTAP00000045872/1-435 ADFYAAYINI LLGVFYTVCR DLKELRHL-- ---------- ------AALN ENSP00000297431/1-435 ADFYAAYINI LLGVFYTVCR DLKELRHL-- ---------- ------AVLN 251 300 ENSTTRP00000010150/1-376 FPKYCEPVVK GEASERDTRK LWRNIEPHLK KAMQTVYLRE ISSSQWEKLQ bmy_13528T0/1-399 FPKYCEPVVK GEASERDTRK LWRNIEPHLK KAMQTVYLRE ISSSQWEKLQ BACU006878/1-286 FPKYCEPVVK GEASERDTRK LWRNIEPHLK KAMQTVYLRE ISSSQWEKLQ ENSBTAP00000045872/1-435 FPKYCEPVVK GEANERDTRK LWRNIEPHLK KAMQTVYLRE ISSSQWEKLQ ENSP00000297431/1-435 FPKYCEPVVK GEASERDTRK LWRNIEPHLK KAMQTVYLRE ISSSQWEKLQ 301 350 ENSTTRP00000010150/1-376 KDDTDPGQLK GLSAYTHV-L PYYSKFILIA AYLAY---PR TDKRFFLKHH bmy_13528T0/1-399 KDDTDPGQLK DL-------- ---------- ---------- ---------- BACU006878/1-286 KDDTDPGQLK GIKGS----- ---------- ---------- ---------- ENSBTAP00000045872/1-435 KDDTDPGQLK GLSAYTHVEL PYYSKFILIA AYLASYNPAR TDKRFFLKHH ENSP00000297431/1-435 KDDTDPGQLK GLSAHTHVEL PYYSKFILIA AYLASYNPAR TDKRFFLKHH 351 400 ENSTTRP00000010150/1-376 GKIKKTNFLK KHEKTSNHLL GPKPXXXXXX XXXXXXXXDS RVAPTANIFS bmy_13528T0/1-399 GNILK--FLN TCKFTSNHLL GPKPFPLDRL LAILYSIVDS RVAPTANIFS BACU006878/1-286 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045872/1-435 GKIKKTNFLK KHEKTSNHLL GPKPFPLDRL LAILYSIVDS RVAPTANIFS ENSP00000297431/1-435 GKIKKTNFLK KHEKTSNHLL GPKPFPLDRL LAILYSIVDS RVAPTANIFS 401 450 ENSTTRP00000010150/1-376 Q--------- ---------- ---------- ---------- ---------- bmy_13528T0/1-399 QVTLMIGYYV SSLPLWNSSD KILLINFLVS KNAFAAGFLT SSRLTLYIFI BACU006878/1-286 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045872/1-435 Q--------- ---------- ---------- ---------- ---------- ENSP00000297431/1-435 Q--------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000010150/1-376 -ITSLVTLQL LTLVGHDDQL DGPKYKCTVS LDFIRAIART VNFDIIKYLY bmy_13528T0/1-399 KITSLVTLQL LTLVGHDDQL DGPKYKCTVS LDFIRAIA-- -SFDVALWLF BACU006878/1-286 ---------- ---------- ---------- ---VETITR- -DTSLIDY-- ENSBTAP00000045872/1-435 -ITSLVTLQL LTLVGHDDQL DEPKYKCTVS LDFIRAIART VNFDIIKYLY ENSP00000297431/1-435 -ITSLVTLQL LTLVGHDDQL DGPKYKCTVS LDFIRAIART VNFDIIKYLY 501 550 ENSTTRP00000010150/1-376 ---------- ---------- ---------- ---------- ---------- bmy_13528T0/1-399 YQILLCLKIV YVGISWIQVC ICLSFTLIFS KGKAPPNRKP FKVVTDTFWI BACU006878/1-286 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045872/1-435 ---------- ---------- ---------- ---------- ---------- ENSP00000297431/1-435 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000010150/1-376 ---DFL---- ---------- ---------- -- bmy_13528T0/1-399 KENEWLSTCI YLEEHMFTVE IWGNHEEVKI TS BACU006878/1-286 ---------- ---------- ---------- -- ENSBTAP00000045872/1-435 ---DFL---- ---------- ---------- -- ENSP00000297431/1-435 ---DFL---- ---------- ---------- --