KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:16 2014 Check: 00 .. Name: ENSP00000353735/1-1045 Len: 1312 Check: 8830 Weight: 1.00 Name: ENSBTAP00000045917/1-1100 Len: 1312 Check: 8676 Weight: 1.00 Name: ENSTTRP00000011527/1-1043 Len: 1312 Check: 8869 Weight: 1.00 Name: bmy_19670T0/1-1081 Len: 1312 Check: 9488 Weight: 1.00 Name: BACU006645/1-1275 Len: 1312 Check: 8750 Weight: 1.00 // 1 50 ENSP00000353735/1-1045 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045917/1-1100 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011527/1-1043 ---------- ---------- ---------- ---------- ---------- bmy_19670T0/1-1081 ---------- ---------- ---------- ---------- ---------- BACU006645/1-1275 MSGYTSDEKL RLQQLRELRR RWLKDQELSP REPVLPPRRV WPMEQFWNKF 51 100 ENSP00000353735/1-1045 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045917/1-1100 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011527/1-1043 ---------- ---------- ---------- ---------- ---------- bmy_19670T0/1-1081 ---------- ---------- ---------- ---------- ---------- BACU006645/1-1275 LQDGASWKNV IYKTYRHSIF AFTHILIPVW IIHYYLKYHV NVKGLMKLRL 101 150 ENSP00000353735/1-1045 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045917/1-1100 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011527/1-1043 ---------- ---------- ---------- ---------- ---------- bmy_19670T0/1-1081 ---------- ---------- ---------- ---------- ---------- BACU006645/1-1275 VGILVTNSYK CGSGSEYTKP LLRKKQKSVS SRKRRSRGEG VKGLIQQWIL 151 200 ENSP00000353735/1-1045 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045917/1-1100 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011527/1-1043 ---------- ---------- ---------- ---------- ---------- bmy_19670T0/1-1081 ---------- ---------- ---------- ---------- ----RRVLCF BACU006645/1-1275 EFLGAEEIAG FHPCASGVDP VDPLQARDLP LNKSGPGCGD SLASWRVLCF 201 250 ENSP00000353735/1-1045 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045917/1-1100 --MGQRDRVR LQTFCFCNLS YHLNRVLMHI SESGGSRRSA SGSGGKWGKG ENSTTRP00000011527/1-1043 ---------- ---------- ---------- ---------- ---------- bmy_19670T0/1-1081 DLLGVAEWVS LSATAFCH-- ---------- ---------- ---------- BACU006645/1-1275 DLLGVAEWVS LSATAFCH-- ---------- ---------- ---------- 251 300 ENSP00000353735/1-1045 ---------- -----MGSQP PLGSPLSREE GEAPPPAPAS EGRRRSRRVR ENSBTAP00000045917/1-1100 WAQAESAKAR PQRRRPGSQQ PPGSPLSREE GEAPRPTPAP EGRRRSRRVR ENSTTRP00000011527/1-1043 ---------- ------GSQQ PPGSPLSREE GEAPLPTPAP EGRRRSRRVR bmy_19670T0/1-1081 --RPQAAIGD ERFTSQGSQQ PPGSPLSREE GEAPLPTPAP EGRRRSRRVR BACU006645/1-1275 --RPQAAIGD ERFTSQGSQQ PPGSPLSREE GEAPLPTPAP EGRRRSRRVR 301 350 ENSP00000353735/1-1045 LRGSCRHRPS FLGCRELAAS APARPAPASS EIMASAAKEF KMDNFSPKAG ENSBTAP00000045917/1-1100 LRGSCRHRPS LLGRRELATS APVRPAPASS EIMASAAKEF KMDNFSPKAG ENSTTRP00000011527/1-1043 LRGSCRHRPS FLGRRELATS SPAGPAPVSS EIMASAAKEF KMDNFSPKAG bmy_19670T0/1-1081 LRGSCRHRPS FLGRRELATS SPAGPAPVSS EIMASAAKEF KMDNFSPKAG BACU006645/1-1275 LRGSCRHRPS FLGRRELATS SPAGPAPVSS EIMASAAKEF KMDNFSPKAG 351 400 ENSP00000353735/1-1045 TSKLQQTVPA DASPDSKCPI CLDRFDNVSY LDRCLHKFCF RCVQEWSKNK ENSBTAP00000045917/1-1100 TSKLQQTVPA DASPDSKCPI CLDRFDNVSY LDRCLHKFCF RCVQEWSKNK ENSTTRP00000011527/1-1043 TSKLQQTVPA DASPDSKCPI CLDRFDNVSY LDRCLHKFCF RCVQEWSKNK bmy_19670T0/1-1081 TSKLQQTVPA DASPDSKCPI CLDRFDNVSY LDRCLHKFCF RCVQEWSKNK BACU006645/1-1275 TSKLQQTVPA DASPDSKCPI CLDRFDNVSY LDRCLHKFCF RCVQEWSKNK 401 450 ENSP00000353735/1-1045 AECPLCKQPF DSIFHSVRAE DDFKEYVLRP SYNGSFVTPD -RRFRYRTTL ENSBTAP00000045917/1-1100 AECPLCKQPF DSIFHSVRAE DDFKEYVLRP SYNGSFATPE VRRFRYRTTM ENSTTRP00000011527/1-1043 AECPLCKQPF DSIFHSVRAE DDFKEYVLRP SYNGSFATPD VRRFRYRTTM bmy_19670T0/1-1081 AECPLCKQPF DSIFHSVRAE DDFKEYVLRP SYNGSFVTPD VRRFRYRTTM BACU006645/1-1275 AECPLCKQPF DSIFHSVRAE DDFKEYVLRP SYNGSFVTPD VRRFRYRTTM 451 500 ENSP00000353735/1-1045 TRERNASVYS PSGPVNRRTT TPPDSGVLFE GLGISTRPRD VEIPQFMRQI ENSBTAP00000045917/1-1100 TRERSASVHS PSSTVNRRTT TPPDSGVLFE GLSISARPRD GEIPPFMRQI ENSTTRP00000011527/1-1043 TRERSASIYS PNSTMNRRTT TPPDSGVIFE GLGISARPRD GEIPPFMRQI bmy_19670T0/1-1081 TRERSASIYS PNSTMNRRTT TPPDSGVIFE GLGISARPRD GEIPPFMRQI BACU006645/1-1275 TRERSASIYS PNSTMNRRTT TPPDSGVIFE GLGISARARD GEIPPFMRQI 501 550 ENSP00000353735/1-1045 AVRRPTTADE RSLRKIQEQD IINFRRTLYR AGARVRNIED GGRYRDISAE ENSBTAP00000045917/1-1100 SVRRPTTTDE RSLRKIQEQD IINFRRTLYR AGARVRNIED GGRYRDISAE ENSTTRP00000011527/1-1043 AIRRPATADE RSLRKIQEQD IINFRRTLYR AGARVRNIED GGRYRDISAE bmy_19670T0/1-1081 AIRRPATADE RSLRKIQEQD IINFRRTLYR AGARVRNIED GGRYRDISAE BACU006645/1-1275 AIRRPATADE RSLRKIQEQD IINFRRTLYR AGARVRNIED GGRYRDISAE 551 600 ENSP00000353735/1-1045 FFRRNPACLH RLVPWLKREL TVLFGAHGSL VNIVQHIIMS NVTRYDLESQ ENSBTAP00000045917/1-1100 FFRRNPACLH RLVPWLKREL TVLFGAHGSL VNIVQHIIMS NVTRYDLESQ ENSTTRP00000011527/1-1043 FFRRNPACLH RLVPWLKREL TVLFGAHGSL VNIVQHIIMS NVTRYDLESQ bmy_19670T0/1-1081 FFRRNPACLH RLVPWLKREL TVLFGAHGSL VNIVQHIIMS NVTRYDLESQ BACU006645/1-1275 FFRRNPACLH RLVPWLKREL TVLFGAHGSL VNIVQHIIMS NVTRYDLESQ 601 650 ENSP00000353735/1-1045 AFVSDLRPFL LNRTEHFIHE FISFARSPFN MAAFDQHANY DCPAPSYEEG ENSBTAP00000045917/1-1100 AFVSDLRPFL LNRTEHFIHE FISFARSPFN MAAFDQHANY DCPAPSYEEG ENSTTRP00000011527/1-1043 AFVSDLRPFL LNRTEHFIHE FISFARSPFN MAAFDQHANY DCPAPSYEEG bmy_19670T0/1-1081 AFVSDLRPFL LNRTEHFIHE FISFARSPFN MAAFDQHANY DCPAPSYEEG BACU006645/1-1275 AFVSDLRPFL LNRTEHFIHE FISFARSPFN MAAFDQHANY DCPAPSYEEG 651 700 ENSP00000353735/1-1045 SHSDSSVITI SPDEAETQEL DINVATVSQA PWDDETPGPS YSSSEQVHVT ENSBTAP00000045917/1-1100 SHSDSSVITI SPDEAETQEL DVNVATVSQA PWDDETPGPS YSSSEQVHAA ENSTTRP00000011527/1-1043 SHSDSSVITI SPDEAETQEL DVNVATVSQA PWDDETPGPS YSSSEQVHAA bmy_19670T0/1-1081 SHSDSSVITI SPDEAETQEL DVNVATVSQA PWDDETPGPS YSSSEQVHAA BACU006645/1-1275 SHSDSSVITI SPDEAETQEL DVNVATVSQA PWDDETPGPS YSSSEQVHAA 701 750 ENSP00000353735/1-1045 MSSLLNTSDS SDEELVTGGA TSQIQGVQTN DDLNNDSDDS SDNCVIVGFV ENSBTAP00000045917/1-1100 MSSLLNTSDS SDEELVTARA TSQIQGVQTN EDLNNDSDSS SDNCVIVGFV ENSTTRP00000011527/1-1043 MSSLLNTSDS SDEELVTGRA TSQMQAVQTN DDINNDSDSS SDNCVIVGFV bmy_19670T0/1-1081 MSSLLNTSDS SDEELVTGRA TSQMQGVQTN DNINNDSDSS SDNCVIVGFV BACU006645/1-1275 MSSLLNTSDS SDEELVTGRA TSQMQVVQTN DNINNDSDSS SDNCVIVGFV 751 800 ENSP00000353735/1-1045 KPLAERTPEL VELSSDSE-D LGSYEKMETV KTQEQEQSYS SGDSDVSRCS ENSBTAP00000045917/1-1100 KPLAERTPEL VELSSDSEVE LGSYEKMETM KTQEQEQSYS SGDSDVSRCS ENSTTRP00000011527/1-1043 KPLAERTPEL VELSSDSE-E LGSYEKMETV KAQEQEQSYS SGDSDVSRCS bmy_19670T0/1-1081 KPLAERTPEL VELSSDSE-E LGSYEKMETV KAQEQEQSYS SGDSDVSRCS BACU006645/1-1275 KPLAERTPEL VELSSDSE-E LGSYEKMETV KAQEQEQSYS SGDSDVSRCS 801 850 ENSP00000353735/1-1045 SPHSVLGKDE QINKGHCDSS TRIKSKKEEK RSTSLSSPRN LNSSVRGDRV ENSBTAP00000045917/1-1100 SPRSVVGKDE QINKGRCDSG TKINSKKEEK RSISLSSLRD LSSSLRGDRV ENSTTRP00000011527/1-1043 SPHSLLGKDE QINKGHCDSG TRIKSKKEEK QSVSLSSPRD LSSSIRGDRV bmy_19670T0/1-1081 SPHSILGKDE QINKGHCDSG TRIKSKKEEK RSVSLSSPRD LSSSIRGDRV BACU006645/1-1275 SPHSILGKDE QINKGHCDSG TRIKSKKEEK RSVSLSSPRD LSSSIRGDRV 851 900 ENSP00000353735/1-1045 YSPYNHRHRK RGRSRSSDSR SQSRSGHDQK NHRKHHGKKR MKSKRSRSRE ENSBTAP00000045917/1-1100 YSPYTRRHRK RGRSRSSDSY SQSRSGHDQK NRRKHHGKKR MKGKRSRSRE ENSTTRP00000011527/1-1043 YSPYTRRHRR RGRSRSSDSC SQSRSGHDQK NHRKHHGKKR MKSRRSRSRE bmy_19670T0/1-1081 YSPYTRRHRR RGRSRSSDSC SQGRSGHDQK NRRKHHGKKR MKSKRSRSRE BACU006645/1-1275 YSPYTRRHRR RGRSRSSDSC SQGRSGHDQK NRRKHHGKKR MKSKRSRSRE 901 950 ENSP00000353735/1-1045 SSRPRGRRDK KRSRTRDSSW SRRSQTLSLS SESTSRSRSR SSDHGKRRSR ENSBTAP00000045917/1-1100 SSRPRGRRDK KRSRTRDSSW SRRSQTLSLS SESSSRSRSR SSDHGKRRSR ENSTTRP00000011527/1-1043 SSRPRGRRDK KRSRTRDSSW SRRSQTLSLS SESTSRSRSR SSDRGKRRSR bmy_19670T0/1-1081 SSRPRGRRDK KRSRTRDSSW SRRSQTLSLS SESTSRSRSR SSDRGKRRSR BACU006645/1-1275 SSRPRGRRDK KRSRTRDSSW SRRSQTLSLS SESTSRSRSR SSDRGKRRSR 951 1000 ENSP00000353735/1-1045 SRNRDRYYLR NNYGSRYKWE YTYYSRNKDR DGYESSYRRR TLSRAHYSRQ ENSBTAP00000045917/1-1100 SRNRDRYYLR NNYGSRYKWE YTYYSRNKDR DGYESSYRRR TLSRAHYSRQ ENSTTRP00000011527/1-1043 SRNRDRYYLR NNYGSRYKWE YTYYSRNKDR DGYESSYRRR TLSRAHYSRQ bmy_19670T0/1-1081 SRNRDRYYLR NNYGSRYKWE YTYYSRNKDR DGYESSYRRR TLSRAHYSRQ BACU006645/1-1275 SRNRDRYYLR NNYGSRYKWE YTYYSRNKDR DGYESSYRRR TLSRAHYSRQ 1001 1050 ENSP00000353735/1-1045 SSSPEFRVQS FSERTNARKK NNHSERKYYY YERHRSRSLS SNRSRTASTG ENSBTAP00000045917/1-1100 SSSPELRIQS FSERTNARKK NNHSERKYYY YERHRSRSLS SNRSKTASTG ENSTTRP00000011527/1-1043 SSSPEFRIQS FSERTNARKK NNHSERKYYY YERHRSRSLS STRSKTASTG bmy_19670T0/1-1081 SSSPEFRIQS FSERTNARKK NNHGERKYYY YERHRSRSLS STRSKTASTG BACU006645/1-1275 SSSPEFRIQS FSERTNARKK NNHGERKYYY YERHRSRSLS STRSKTASTG 1051 1100 ENSP00000353735/1-1045 TDRVRNEKPG GKRKYKTRHL EGTNEVAQPS REFASKAKDS HYQKSSSKLD ENSBTAP00000045917/1-1100 PDRVRNEKPG GKRKYKTRHL EGTNDVAQPC HEFASKVKEG HYSKSSSKLD ENSTTRP00000011527/1-1043 PDRVRNEKPG GKRKYKTRHL EGSNDVAQPS REFASKVKEG HYSKSSSKLD bmy_19670T0/1-1081 PDRVRNEKPG GKRKYKTRHL EGSNDVAQPS REFASKVKEG HYSKSSSKLD BACU006645/1-1275 PDRVRNEKPG GKRKYKTRHL EGSNDVAQPS REFASKVKEG HYSKSSSKLD 1101 1150 ENSP00000353735/1-1045 GNYKNESDTF SDSRSSDRET KHKRRKRKTR SLSVEIVYEG KATDTTKHHK ENSBTAP00000045917/1-1100 GGYKNESDSF SDSRSSDRET KHKRRKRRTR SLSVEIVYEG KATDTTRHHK ENSTTRP00000011527/1-1043 GSYKNESDSF SDSRSSDRET KHKRRKR-TR SLSVEIVYEG KATDTTRHHK bmy_19670T0/1-1081 GSYKNESDSF SDSRSSDRET KHKRRKR-TR SLSVEIVYEG KATDTTRHHK BACU006645/1-1275 GSYKNESDSF SDSRSSDRET KHKRRKR-TR SLSVEIVYEG KATDTTRHHK 1151 1200 ENSP00000353735/1-1045 KKKKKHKKKH KKHHGDNASR SPVVITIDSD SDKDSEVKED TECDNSGPQD ENSBTAP00000045917/1-1100 KKKKKHKRKH KRHHGDNASH SPVVITIDSD SDKDCEVKED IECDPSGPQG ENSTTRP00000011527/1-1043 KKKKKHKRKH KKHHGDNASR SPVVITIDSD SDKDSEVKED TECDLSGPQD bmy_19670T0/1-1081 KKKKKHKRKH KKHHGDNASR SPVVITIDSD SDKDSEVKED TERDLSGPQD BACU006645/1-1275 KKKKKHKRKH KKHHGDNASR SPVVITIDSD SDKDSEVKED TERDLSGPQD 1201 1250 ENSP00000353735/1-1045 PLQNEFLAPS LEPFETKDVV TIEAEFGVLD KECDIATLSN NLNNANKTVD ENSBTAP00000045917/1-1100 PLQSEVLAP- ---FESKDVV TIEDEFGVLS KECDITILNN NLNNANKTVD ENSTTRP00000011527/1-1043 PLQNEFLVPS FGPFETKDVV TIEDEFGVLG KECDITTLNN NLNNANKTVD bmy_19670T0/1-1081 PLQNEFLVPS LDPFETKDVV TIEDEFGVLG KECDITTLNN NLNNANKTVD BACU006645/1-1275 PLQNEFLVPS LEPFETKDVV TIEDEFGVLG KECDITTLNN NLNNANKTVD 1251 1300 ENSP00000353735/1-1045 NIPPLAASVE QTLDVREEST FVSDLENQPS NIVSLQTEPS RQLPSPRTSL ENSBTAP00000045917/1-1100 NISPQAASIG QTLDVREEST LASDLENQPS T-VSFQTE-- ---PSRTSSL ENSTTRP00000011527/1-1043 NISPQAASIE QTLDVREEST FASDLESQPS N-VSYQTESS RRLPSPRISL bmy_19670T0/1-1081 NISPQAASIE QTLDVREENT FASDLESQPS N-VSYQIESS RRLPSPRISL BACU006645/1-1275 NISPQAASIE QTLDVREENI FASDLESQPS N-VSYQIESS RRLPSPRISL 1301 1350 ENSP00000353735/1-1045 MSVCLGRDCD MS ENSBTAP00000045917/1-1100 MSVSLGRDHD VS ENSTTRP00000011527/1-1043 MSVSLGRDHD MS bmy_19670T0/1-1081 MSVSLGRDHD MS BACU006645/1-1275 MSVSLGRDHD MS