KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:18 2014 Check: 00 .. Name: BACU014025/1-200 Len: 277 Check: 3477 Weight: 1.00 Name: ENSP00000309644/1-185 Len: 277 Check: 4597 Weight: 1.00 Name: ENSBTAP00000045952/1-185 Len: 277 Check: 3226 Weight: 1.00 Name: bmy_18472T0/1-206 Len: 277 Check: 6396 Weight: 1.00 Name: ENSTTRP00000000358/1-185 Len: 277 Check: 4515 Weight: 1.00 // 1 50 BACU014025/1-200 ---------- ---------- --MLPVQVPD TLRDPTVAL- ---------- ENSP00000309644/1-185 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045952/1-185 ---------- ---------- ---------- ---------- ---------- bmy_18472T0/1-206 MQRSAVSSPG ERPGWGGWFL PPLPPPLLPE NLPSPPPPLP SPLPPLPPPP ENSTTRP00000000358/1-185 ---------- ---------- ---------- ---------- ---------- 51 100 BACU014025/1-200 ---------- ---------- ---------- -----LEADT TSPNYGACFF ENSP00000309644/1-185 ---------- ---------- ---------- -----MADGG GGGGTGA--- ENSBTAP00000045952/1-185 ---------- ---------- ---------- -----MADGG GGGSTGA--- bmy_18472T0/1-206 PPPPPPAPRP PLHHPGPLSL RGIRVQSPSR ARGAAMADGG GGGGTGA--- ENSTTRP00000000358/1-185 ---------- ---------- ---------- -----MADGG GGGGTGA--- 101 150 BACU014025/1-200 TCHLLCQVPD WPLMAEVKTT CLGSRESKSL ---------G SQLIALIVEQ ENSP00000309644/1-185 ----VGGGGT SQASAGAATG ATGASGGGGP INPASLPPGD PQLIALIVEQ ENSBTAP00000045952/1-185 ----VGGGGA GPASAGAAAG GGGAGGSGGP INPASLPPGD PQLIALIVEQ bmy_18472T0/1-206 ----VGGGGA GQASAGATTG ATGAGGSGGP INPASLPPGD PQLIALIVEQ ENSTTRP00000000358/1-185 ----VGGGGA GQASAGATTG ATGAGGSGGP INPASLPPGD PQLIALIVEQ 151 200 BACU014025/1-200 LKSRGLFDSF RRDCLADVDT KPAYQNLRQK VDNFVSTHLD KQEWNPTMNK ENSP00000309644/1-185 LKSRGLFDSF RRDCLADVDT KPAYQNLRQK VDNFVSTHLD KQEWNPTMNK ENSBTAP00000045952/1-185 LKSRGLFDSF RRDCLADVDT KPAYQNLRQK VDNFVSTHLD KQEWNPTMNK bmy_18472T0/1-206 LKSRGLFDSF RRDCLADVDT KPAYQNLRQK VDNFVSTHLD KQEWNPTMNK ENSTTRP00000000358/1-185 LKSRGLFDSF RRDCLADVDT KPAYQNLRQK VDNFVSTHLD KQEWNPTMNK 201 250 BACU014025/1-200 NQLRNGLRQS VVQSGMLEAG VDRIISQVVD PKLNHIFRPQ IERAIHEFLA ENSP00000309644/1-185 NQLRNGLRQS VVQSGMLEAG VDRIISQVVD PKLNHIFRPQ IERAIHEFLA ENSBTAP00000045952/1-185 NQLRNGLRQS VVQSGMLEAG VDRIISQVVD PKLNHIFRPQ IERAIHEFLA bmy_18472T0/1-206 NQLRNGLRQS VVQ------- ---------- ---------- ---------- ENSTTRP00000000358/1-185 NQLRNGLRQS VVQSGMLEAG VDRIISQVVD PKLNHIFRPQ IERAIHEFLA 251 300 BACU014025/1-200 AQKKEAVPAP PPEPESQDPP APSQDAS ENSP00000309644/1-185 AQKKAAVPAP PPEPEGQDPP APSQDTS ENSBTAP00000045952/1-185 AQKKEAVPAP PPEPESQDPA APSQDAS bmy_18472T0/1-206 ---------- ---------- ------- ENSTTRP00000000358/1-185 AQKKEAVPAP PPEPESQDPP APSQDAS