KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:19 2014 Check: 00 .. Name: BACU012240/1-766 Len: 829 Check: 7719 Weight: 1.00 Name: ENSTTRP00000000697/1-637 Len: 829 Check: 6971 Weight: 1.00 Name: ENSBTAP00000045984/1-605 Len: 829 Check: 3103 Weight: 1.00 Name: ENSP00000229416/1-637 Len: 829 Check: 6420 Weight: 1.00 Name: bmy_20617T0/1-674 Len: 829 Check: 8469 Weight: 1.00 // 1 50 BACU012240/1-766 MGLLSQGSPL SWEETQRHAD HVRLHGILQF LHIYHAVKDR HKDVLKWGDE ENSTTRP00000000697/1-637 MGLLSQGSPL SWEETQRHAN HVRLHGILQF LHIYHAVKDR HKDVLKWGDE ENSBTAP00000045984/1-605 MGLLSQGSPL SWEETQRHAD HVRRHGILQF LHIYHAVKDR HKDVLKWGDE ENSP00000229416/1-637 MGLLSQGSPL SWEETKRHAD HVRRHGILQF LHIYHAVKDR HKDVLKWGDE bmy_20617T0/1-674 MGLLSQGSPL SWEETQRHAD HVRLHGILQF LHIYHAVKDR HKDVLKWGDE 51 100 BACU012240/1-766 VEYMLVSFDH ENKKAQLVLS GEELLETLQE KGERTNPNHP TLWRPEYGSY ENSTTRP00000000697/1-637 VEYMLVSFDH ENRKAQLVLS GEELLETLQE KGERTNPNHP TLWRPEYGSY ENSBTAP00000045984/1-605 VEYMLVSFDH EKKKAQLVLS GEELLETLQE KGERTNPNHP TLWRPEYGSY ENSP00000229416/1-637 VEYMLVSFDH ENKKVRLVLS GEKVLETLQE KGERTNPNHP TLWRPEYGSY bmy_20617T0/1-674 VEYMLVSFDH ENKKAQLVLS GEELLETLQE KGERTNPNHP TLWRPEYGSY 101 150 BACU012240/1-766 MIEGTPGQPY GGTMSEFNTV EDNMRKRRKE ATSLLGENQA LCTITSFPRL ENSTTRP00000000697/1-637 MIEGTPGQPY GGTMSEFNTV EDNMRKRRKE ATSLLGENQA LCTITSFPRL ENSBTAP00000045984/1-605 MIEGTPGQPY GGTMSEFNTV EDNMRKRRKE ATSLLGENQA LCTITSFPRL ENSP00000229416/1-637 MIEGTPGQPY GGTMSEFNTV EANMRKRRKE ATSILEENQA LCTITSFPRL bmy_20617T0/1-674 MIEGTPGQPY GGTMSEFNTV EDNMRKRRKE ATSLLGENQA LCTITSFPRL 151 200 BACU012240/1-766 GCPGFTLPEF KPNPVEGGAS KSLFFPDEAI NKHPRFSTLT RNIRHRRGEK ENSTTRP00000000697/1-637 GCPGFTLPEF KPNPVEGGAS KSLFFPDEAI NKHPRFSTLT RNIRHRRGEK ENSBTAP00000045984/1-605 GCPGFTLPEF KPNPVEGGAS KSLFFPDEAI NKHPRFSTLT RNIRHRRGEK ENSP00000229416/1-637 GCPGFTLPEV KPNPVEGGAS KSLFFPDEAI NKHPRFSTLT RNIRHRRGEK bmy_20617T0/1-674 GCPGFTLPEF KPNPVEGGAS KSLFFPDEAI NKHPRFSTLT RNIRHRRGEK 201 250 BACU012240/1-766 VVINVPI-FQ DKNTPCPFIE TFPEDDEAAK ASKPDHIYMD AMGFGMGNCC ENSTTRP00000000697/1-637 VVINVPI-FK DKNTPSPFIE TFPEDDEAAK ASKPDHIYMD AMGFGMGNCC ENSBTAP00000045984/1-605 VVINVPTPHL PKDHPGP--- ---------- ---------- ---------- ENSP00000229416/1-637 VVINVPI-FK DKNTPSPFIE TFTEDDEASR ASKPDHIYMD AMGFGMGNCC bmy_20617T0/1-674 VVINVPI-FK DKNTPSPFIE TFPEDDEAAK ASKPDHIYMD AMGFGMGNCC 251 300 BACU012240/1-766 LQ-------- ---------- -------MAL SAASPFYRGY VSDIDCRWGV ENSTTRP00000000697/1-637 LQVTFQACSI SEARYLYDQL ATICPIVMAL SAASPFYRGY VSDIDCRWGV ENSBTAP00000045984/1-605 AQVTFQACSI SEARYLYDQL ATICPIVMAL SAASPFYRGY VSDIDCRWGV ENSP00000229416/1-637 LQVTFQACSI SEARYLYDQL ATICPIVMAL SAASPFYRGY VSDIDCRWGV bmy_20617T0/1-674 LQVTFQACSI SEARYLYDQL ATICPIVMAL SAASPFYRGY VSDIDCRWGV 301 350 BACU012240/1-766 ISASVDDRTR EERGLEPLKN NHYRISKSRY DSIDSYLSEC GEKYNDIDLT ENSTTRP00000000697/1-637 ISASVDDRTR EERGLEPLKN NHYRISKSRY DSIDSYLSEC GEKYNDIDLT ENSBTAP00000045984/1-605 ISASVDDRTR EERGLEPLKN NHYRISKSRY DSIDSYLSEC GEKYNDIDLT ENSP00000229416/1-637 ISASVDDRTR EERGLEPLKN NNYRISKSRY DSIDSYLSKC GEKYNDIDLT bmy_20617T0/1-674 ISASVDDRTR EERGLEPLKN NHYRISKSRY DSIDSYLSEC GEKYNDIDLT 351 400 BACU012240/1-766 KDKEIYEQLL QEGIDHLLAQ HVAHLFIRDP LTLFEEKIHL DDANESDHFE ENSTTRP00000000697/1-637 KHKEIYEQLL QEGIDHLLAQ HVAHLFIRDP LTLFEEKIHL DDANESDHFE ENSBTAP00000045984/1-605 KDKEIYEQLL QEGLDHLLAQ HVAHLFIRDP LTLFEEKIHL DDANESDHFE ENSP00000229416/1-637 IDKEIYEQLL QEGIDHLLAQ HVAHLFIRDP LTLFEEKIHL DDANESDHFE bmy_20617T0/1-674 KDKEIYEQLL QEGIDHLLAQ HVAHLFIRDP LTLFEEKIHL DDANESDHFE 401 450 BACU012240/1-766 NIQSTNWQTM RFKPPPPNSD IGWRVEFRPM E--------- ---------- ENSTTRP00000000697/1-637 NIQSTNWQTM RFKPPPPNSD IGWRVEFRPM E--------- ---------- ENSBTAP00000045984/1-605 NIQSTNWQTM RFKPPPPNSD IGWRVEFRPM E--------- ---------- ENSP00000229416/1-637 NIQSTNWQTM RFKPPPPNSD IGWRVEFRPM E--------- ---------- bmy_20617T0/1-674 NIQSTNWQTM RFKPPPPNSD IGWRVEFRPM EVRSPLAGTD SDAPVPSHLP 451 500 BACU012240/1-766 ---------- --------VQ LTDFENSAYV VFVVLLTRVI LSYKLDFLIP ENSTTRP00000000697/1-637 ---------- --------VQ LTDFENSAYV VFVVLLTRVI LSYKLDFLIP ENSBTAP00000045984/1-605 ---------- --------VQ LTDFENSAYV VFVVLLTRVI LSYKLDFLIP ENSP00000229416/1-637 ---------- --------VQ LTDFENSAYV VFVVLLTRVI LSYKLDFLIP bmy_20617T0/1-674 PTRSLVRSSG YLEGSTDHVQ LTDFENSAYV VFVVLLTRVI LSYKLDFLIP 501 550 BACU012240/1-766 LSKVDENMKV AQKRDAVLQG LFYFRKDICK GGNAMVDGRG KTTGSTEPAA ENSTTRP00000000697/1-637 LSKVDENMKV AQKRDAVLQG LFYFRKDICK GGNAXXXXXX XXXXXXXXXX ENSBTAP00000045984/1-605 LSKVDENMKV AQKRDAVLQE LFYFRKDICK GGNAVVDGCG KAAGRAEPAA ENSP00000229416/1-637 LSKVDENMKV AQKRDAVLQG MFYFRKDICK GGNAVVDGCG KAQNSTELAA bmy_20617T0/1-674 LSKVDDNMKA AQKRDAVLQG LFYFRKDICK GGNAMVDGRG KTTGSTEPAA 551 600 BACU012240/1-766 EEYALMTIDT ITKGKEGVFP GLIPILNSYL ENMEVDVDTR CSILNYLKLI ENSTTRP00000000697/1-637 XXXXXXXXXX XXXXXEGMFP GLIPIVNSYL ENMEVDVDTR CSILNYLKLI ENSBTAP00000045984/1-605 EEYALMTIDT IINGKEGVFP GLIPVLNSYL ESMEVDVDTR CSILNYLKLI ENSP00000229416/1-637 EEYTLMSIDT IINGKEGVFP GLIPILNSYL ENMEVDVDTR CSILNYLKLI bmy_20617T0/1-674 EEYALMTIDT IINGKEGVFP GLIPILNSYL ENMEVDVDTR CSILNYLKLI 601 650 BACU012240/1-766 KKRASALFMV QVKSECHFSN STRQVHFLGR YIYNREELVR FDSHVGEDLA ENSTTRP00000000697/1-637 KKRASGELMT VAR------- ------WMRE FIANHPDY-K QDSVITDEM- ENSBTAP00000045984/1-605 KKRASGELMT VAK------- ------WMRE FIAKHPDY-K QDSVITDQM- ENSP00000229416/1-637 KKRASGELMT VAR------- ------WMRE FIANHPDY-K QDSVITDEM- bmy_20617T0/1-674 KKRASGELMT VAR------- ------WMRE FIANHPDY-K QDSVITDEM- 651 700 BACU012240/1-766 VSELGRPAAE LWNRQKDALE RGRAAGHTFC RINYKFLESS AVRRRVTVYP ENSTTRP00000000697/1-637 ---------- ---------- ---------- --NYSLL--- ---------- ENSBTAP00000045984/1-605 ---------- ---------- ---------- --NYSLL--- ---------- ENSP00000229416/1-637 ---------- ---------- ---------- --NYSLI--- ---------- bmy_20617T0/1-674 ---------- ---------- ---------- --NYSLL--- ---------- 701 750 BACU012240/1-766 AKTQPLWHHS LLVCSVNGFY PGHTEVRCFQ NGQEEEAGVV STGLIPNGDW ENSTTRP00000000697/1-637 ---------- ---------- -----LKCNQ IANE------ ---------- ENSBTAP00000045984/1-605 ---------- ---------- -----LKCNQ IANE------ ---------- ENSP00000229416/1-637 ---------- ---------- -----LKCNQ IANE------ ---------- bmy_20617T0/1-674 ---------- ---------- -----LKCNQ IANE------ ---------- 751 800 BACU012240/1-766 TFQLMVMLEI VPQSGEVYTC HVEHPSWTSP VAVEWRYSGL QPTGNALSSS ENSTTRP00000000697/1-637 ---------- --------LC E--CPELLGP AFRKVKYSG- ---------- ENSBTAP00000045984/1-605 ---------- --------SC E--CPELLGP AFRKVRYSG- ---------- ENSP00000229416/1-637 ---------- --------LC E--CPELLGS AFRKVKYSG- ---------- bmy_20617T0/1-674 ---------- --------LC E--CPELLGP AFRKVKYSG- ---------- 801 850 BACU012240/1-766 FRDRFGLLEM VMEMTRQETD KMRKTLNSD ENSTTRP00000000697/1-637 ---------- ---------- --SKTDSSN ENSBTAP00000045984/1-605 ---------- ---------- --SKTDSST ENSP00000229416/1-637 ---------- ---------- --SKTDSSN bmy_20617T0/1-674 ---------- ---------- --SKTDSSN