KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:19 2014 Check: 00 .. Name: bmy_02424T0/1-371 Len: 497 Check: 1848 Weight: 1.00 Name: ENSP00000382779/1-421 Len: 497 Check: 1262 Weight: 1.00 Name: ENSBTAP00000045994/1-360 Len: 497 Check: 8162 Weight: 1.00 Name: BACU019926/1-371 Len: 497 Check: 9846 Weight: 1.00 Name: ENSTTRP00000011634/1-386 Len: 497 Check: 1912 Weight: 1.00 // 1 50 bmy_02424T0/1-371 MTGRGAGLGA AQPGARERPA GNTAVRAPEP GPGGLRSARR RAVLLEEGGA ENSP00000382779/1-421 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000045994/1-360 ---------- ---------- ---------- ---------- ---------- BACU019926/1-371 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011634/1-386 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_02424T0/1-371 GAAMFVARSI AADHKDLIHD VSFDFHGRRM ATCSSDQSVK VWDKSESGDW ENSP00000382779/1-421 ---MFVARSI AADHKDLIHD VSFDFHGRRM ATCSSDQSVK VWDKSESGDW ENSBTAP00000045994/1-360 ---MFVARSI AADHKDLIHD VSFDFHGRRM ATCSSDQSVK VWDKSESGEW BACU019926/1-371 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011634/1-386 ---------- ---------- ---------- ---------- VWDKSESGDW 101 150 bmy_02424T0/1-371 HCTASWKTHS GSVWRVTWAH PEFGQVLASC SFDRTAAVWE EIVGESNDKL ENSP00000382779/1-421 HCTASWKTHS GSVWRVTWAH PEFGQVLASC SFDRTAAVWE EIVGESNDKL ENSBTAP00000045994/1-360 HCTASWKTHS GSVWRVTWAH PEFGQVLASC SFDRTAAVWE EIVGESNDKL BACU019926/1-371 ------QTHS GSVWRVTWAH PEFGQVLASC SFDRTAAVWE EIVGESNDKL ENSTTRP00000011634/1-386 HCTASWKTHS GSVWRVTWAH PEFGQVLASC SFDRTAAVWE EIVGESNDKL 151 200 bmy_02424T0/1-371 RGQSHWVRHL ---------- ---------- ---------- ---------- ENSP00000382779/1-421 RGQSHWVKRT TLVDSRTSVT DVKFAPKHMG LMLATCSADG IVRIYEAPDV ENSBTAP00000045994/1-360 RGQSHWVKRT TLVDSRTSVT DVKFAPKHMG LMLATCSADG IVRIYEAPDV BACU019926/1-371 RGQSHWVKRT TLVDSRTSVT DVKFAPKHMG LMLATCSADG IVRIYEAPDV ENSTTRP00000011634/1-386 RGQSHWVKRT TLVDSRTSVT DVKFAPKHMG LMLATCSADG IVRIYEAPDV 201 250 bmy_02424T0/1-371 ---------- -----LAVGC -------SRA HSPMIAVGSD DSSPNAMAKV ENSP00000382779/1-421 MNLSQWSLQH EISCKLSCSC ISWNPSSSRA HSPMIAVGSD DSSPNAMAKV ENSBTAP00000045994/1-360 MNLSQWSLQH EISCKLSCSC ISWNPSSSRA HAPMIAVGSD DSSPNAMAKV BACU019926/1-371 MNLSQWSLQH EISCKLSCSC ISWNPSSSRA HSPMIAVGSD DSSPNAMAKV ENSTTRP00000011634/1-386 MNLSQWSLQH EISCKLSCSC ISWNPSSSRA HSPMIAVGSD DSSPNAMAKV 251 300 bmy_02424T0/1-371 QIFEYNENTS YALFVTYLLI SYDTLSSLLW KYAKAETLLT VTDPVHDIAF ENSP00000382779/1-421 QIFEYNENTR ---------- ---------- KYAKAETLMT VTDPVHDIAF ENSBTAP00000045994/1-360 QIFEYNENTR ---------- ---------- KYAKAETLLT VTDPVHDIAF BACU019926/1-371 QIFEYNENTR ---------- ---------- KYAKAETLLT VTDPVHDIAF ENSTTRP00000011634/1-386 QIFEYNENTR ---------- ---------- KYAKAETLLT VTDPVHDIAF 301 350 bmy_02424T0/1-371 APNLGRSFHI LAIATKDVRI FTLKPVRKEL TSSGGPTKFE IHIVAQFDNH ENSP00000382779/1-421 APNLGRSFHI LAIATKDVRI FTLKPVRKEL TSSGGPTKFE IHIVAQFDNH ENSBTAP00000045994/1-360 APNLGRSFHI LAIATKDVRI FTLKPVRKEL TSSGGPTKFE IHIVAQFDNH BACU019926/1-371 APNLGRSFHI LAIATKDVRI FTLKPVRKEL TSSGGPTKFE IHIVAQFDNH ENSTTRP00000011634/1-386 APNLGRSFHI LAIATKDVRI FTLKPVRKEL TSSGGPTKFE IHIVAQFDNH 351 400 bmy_02424T0/1-371 NSQVWRVSWN ITGTVLASSG DDGCVRLWKA NYMDNWKCTG ILKGNGSPVN ENSP00000382779/1-421 NSQVWRVSWN ITGTVLASSG DDGCVRLWKA NYMDNWKCTG ILKGNGSPVN ENSBTAP00000045994/1-360 NSQVWRVSWN ITGTVLASSG DDGCVRLWKA NYMDNWKCTG ILKGNGSPVN BACU019926/1-371 NSQVWRVSWN ITGTVLASSG DDGCVRLWKA NYMDNWKCTG ILKGNGSPVN ENSTTRP00000011634/1-386 NSQVWRVSWN ITGTVLASSG DDGCVRLWKA NYMDNWKCTG ILKGNGSPVN 401 450 bmy_02424T0/1-371 GSSQQGNSNP SLGSNIPNLQ NSLNGSSAGR ---------- ---------- ENSP00000382779/1-421 GSSQQGTSNP SLGSTIPSLQ NSLNGSSAGR YFFTPLDSPR AGSRWSSYAQ ENSBTAP00000045994/1-360 GSSQQGNSNP SVGSNIPSLQ NSLNGSSAGR ---------- ---------- BACU019926/1-371 GSSQQGNSNP SLGSNIPNLQ NSLNGSSAGR YFFPPLDSPR AGSRWSSYAQ ENSTTRP00000011634/1-386 GSSQQGNSNP SLGSNIPNLQ NSLNGSSAGR YFFPPLDSPR AGSRWSSYAQ 451 500 bmy_02424T0/1-371 ---------- ---KHS---- ---------- ---------- ------- ENSP00000382779/1-421 LL---PPPPP PLVEHSCDAD TANLQYPHPR RRYLSRPLNP LPENEGI ENSBTAP00000045994/1-360 ---------- ---KHS---- ---------- ---------- ------- BACU019926/1-371 LLPPPPPPPP PLIEHSCDAD TASLQYPHPR RRSLSRPLNP LPENEGV ENSTTRP00000011634/1-386 LL-PPPPPPP PLIEHSCDAD TASLQYPHPR RRSLSRPLNP LPENEGV