KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:57:21 2014  Check: 00 ..

 Name: ENSP00000377381/1-234     Len:    241  Check:  6354  Weight:  1.00
 Name: ENSTTRP00000012269/1-233  Len:    241  Check:  5767  Weight:  1.00
 Name: ENSBTAP00000046032/1-234  Len:    241  Check:  6399  Weight:  1.00
 Name: bmy_04511T0/1-213         Len:    241  Check:  9684  Weight:  1.00
 Name: BACU003678/1-241          Len:    241  Check:  8667  Weight:  1.00

//


                          1                                                   50
ENSP00000377381/1-234     -------MGG CVGAQHDSSG SLNENSEGTG VALGRNQPLK KEKPKWKSDY 
ENSTTRP00000012269/1-233  -------MGG CVGAQHDSSG SLNE-SEGTG VALGRNQPLK KEKPKWKSDY 
ENSBTAP00000046032/1-234  -------MGG CVGAQHDSSG SLNENSEGTG VALGRNQPLK KEKPKWKSDY 
bmy_04511T0/1-213         ---------- ---------- --------MP VALGRNQPLK KEKPKWKSDY 
BACU003678/1-241          MKEPKKNDQI AIKTSFINFG FDVSPLFFFS VALGRNQPLK KEKPKWKSDY 


                          51                                                 100
ENSP00000377381/1-234     PMTDGQLRSK RDEFWDTAPA FEGRKEIWDA LKAAAHAFES NDHELAQAII 
ENSTTRP00000012269/1-233  PMTDGQLRSK RDEFWDTAPA FEGRKEIWDA LKAAAHAFEN NDHELAQAII 
ENSBTAP00000046032/1-234  PMTDGQLRSK RDEFWDTAPA FEGRKEIWDA LKAAAHAFES NDHELAQAII 
bmy_04511T0/1-213         PMTDGQLRSK RDEFWDTAPA FEGRKEIWDA LKAAAHAFES NDHELAQAII 
BACU003678/1-241          PMTDGQLRSK RDEFWDTAPA FEGRKEIWDA LKAAAHAFES NDHELAQAII 


                          101                                                150
ENSP00000377381/1-234     DGANITLPHG ALTECYDELG NRYQLPVYCL APPINMIEEK SDIETLDIPE 
ENSTTRP00000012269/1-233  DGANITLPHG ALTECYDELG NRYQLPVYCL APPINMIEEK SDIETLDIPE 
ENSBTAP00000046032/1-234  DGANITLPHG ALTECYDELG NRYQLPVYCL APPINMIEEK SDIETLDIPE 
bmy_04511T0/1-213         DGANITLPHG ALTECYDELG NRYQLPVYCL APPINMIEEK SDIETLDIPE 
BACU003678/1-241          DGANITLPHG ALTECYDELG NRYQLPVYCL APPINMIEEK SDIETLDIPE 


                          151                                                200
ENSP00000377381/1-234     PPPNSGYECQ LRLRLSTGKD LKLVVRSTDT VFHMKRRLHA AEGVEPGSQR 
ENSTTRP00000012269/1-233  PPPNSGYESQ LRLRLSTGKD LKLVVRSTDT VYHMKRRLHA AEGVEPASQR 
ENSBTAP00000046032/1-234  PPPNSGYESQ LRLRLSTGKD LKLVVRSTDT VYHMKRRLHA AEGVEPASQR 
bmy_04511T0/1-213         PPPNSGYESQ LRLRLSTGKD LKLVVRSTDT VYHMKRRLHA AEGVEPGSQR 
BACU003678/1-241          PPPNSGYESQ LRLRLSTGKD LKLVVRSTDT VYHMKRRLHA AEGVEPGSQR 


                          201                                                250
ENSP00000377381/1-234     WFFSGRPLTD KMKFEELKIP KDYVVQVIVS QPVQNPTPVE N 
ENSTTRP00000012269/1-233  WFFSGRPLTD KMKLEELKIP KDYVVQVIMS QPLQNPTPVE N 
ENSBTAP00000046032/1-234  WFFSGRPLTD KMRLEELKIP KDYVVQVIMS QPLQNPTPVE N 
bmy_04511T0/1-213         WFFSGRPLTD KMKLEELKIP KDYVVQVIMS QPLQNPTPVE N 
BACU003678/1-241          WFFSGRPLTD KMKLEELKIP KDYVVQVIMS QPLQNPTPVE N