KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:22 2014 Check: 00 .. Name: ENSBTAP00000046048/1-1149 Len: 1178 Check: 8018 Weight: 1.00 Name: ENSP00000360689/1-1166 Len: 1178 Check: 6125 Weight: 1.00 Name: bmy_18891T0/1-1143 Len: 1178 Check: 5507 Weight: 1.00 Name: BACU019140/1-1155 Len: 1178 Check: 6310 Weight: 1.00 Name: ENSTTRP00000005899/1-1168 Len: 1178 Check: 7648 Weight: 1.00 // 1 50 ENSBTAP00000046048/1-1149 MSGRRCAGGG AAC--AGAAA EAVEPAAREL FEACRNGDVE RVKRLVTPEK ENSP00000360689/1-1166 MSGRRCAGGG AAC--ASAAA EAVEPAAREL FEACRNGDVE RVKRLVTPEK bmy_18891T0/1-1143 MSGRRCAGGG AAC--AGAAA EAVEPAAREL FEACRNGDVE RVKRLVTPEK BACU019140/1-1155 ---------- ---------- ---XPAAREL FEACRNGDVE RVKRLVTPEK ENSTTRP00000005899/1-1168 MSGRRCAGGG AACAGAGAAA EAVEPAAREL FEACRNGDVE RVKRLVTPEK 51 100 ENSBTAP00000046048/1-1149 VNSRDTAGRK STPLHFAAGF GRKDVVEYLL QNGANVQARD DGGLIPLHNA ENSP00000360689/1-1166 VNSRDTAGRK STPLHFAAGF GRKDVVEYLL QNGANVQARD DGGLIPLHNA bmy_18891T0/1-1143 VNSRDTAGRK STPLHFAAGF GRKDVVEYLL QNGANVQARD DGGLIPLHNA BACU019140/1-1155 VNSRDTAGRK STPLHFAAGF GRKDVVEYLL QNGANVQARD DGGLIPLHNA ENSTTRP00000005899/1-1168 VNSRDTAGRK STPLHFAASF GRKDVVEYLL QNGANVQARD DGGLIPLHNA 101 150 ENSBTAP00000046048/1-1149 CSFGHAEVVN LLLRHGADPN ARDNWNYTPL HEAAIKGKID VCIVLLQHGA ENSP00000360689/1-1166 CSFGHAEVVN LLLRHGADPN ARDNWNYTPL HEAAIKGKID VCIVLLQHGA bmy_18891T0/1-1143 CSFGHAEVVN LLLRHGADPN ARDNWNYTPL HEAAIKGKID VCIVLLQHGA BACU019140/1-1155 CSFGHAEVVS LLLRHGADPN ARDNWNYTPL HEAAIKGKID VCIVLLQHGA ENSTTRP00000005899/1-1168 CSFGHAEVVN LLLRHGADPN ARDNWNYTPL HEAAIKGKID VCIVLLQHGA 151 200 ENSBTAP00000046048/1-1149 EPTIRNTDGR TALDLADPSA KAVLTGEYKK DELLESARSG NEEKMMALLT ENSP00000360689/1-1166 EPTIRNTDGR TALDLADPSA KAVLTGEYKK DELLESARSG NEEKMMALLT bmy_18891T0/1-1143 EPTIRNTDGR TALDLADPSA KAVLTGEYKK DELLESARSG NEEKMMALLT BACU019140/1-1155 EPTIRNTDGR TALDLADPSA KAVLTGEYKK DELLESARSG NEEKMMALLT ENSTTRP00000005899/1-1168 EPTIRNTDGR TALDLADPSA KAVLTGEYKK DELLESARSG NEEKMMALLT 201 250 ENSBTAP00000046048/1-1149 PLNVNCHASD GRKD--LYYV LGGTKRHLTT ---------- -----DLVPL ENSP00000360689/1-1166 PLNVNCHASD GRKSTPLHLA AGYNRVKIVQ LLLQHGADVH AKDKGDLVPL bmy_18891T0/1-1143 PLNVNCHASD GRKSTPLHLA AGYNRVKIVQ LLLQHGADVH AKDKGDLVPL BACU019140/1-1155 PLNVNCHASD GRKSTPLHLA AGYNRVKIVQ LLLQHGADVH AKDKGDLVPL ENSTTRP00000005899/1-1168 PLNVNCHASD GRKSTPLHLA AGYNRVKIVQ LLLQHGADVH AKDKGDLVPL 251 300 ENSBTAP00000046048/1-1149 HNACSYGHYE VTELLVKHGA CVNAMDLWQF TPLHEAASKN RVEVCSLLLS ENSP00000360689/1-1166 HNACSYGHYE VTELLVKHGA CVNAMDLWQF TPLHEAASKN RVEVCSLLLS bmy_18891T0/1-1143 HNACSYGHYE VTELLVKHGA CVNAMDLWQF TPLHEAASKN RVEVCSLLLS BACU019140/1-1155 HNACSYGHYE VTELLVKHGA CVNAMDLWQF TPLHEAASKN RVEVCSLLLS ENSTTRP00000005899/1-1168 HNACSYGHYE VTELLVKHGA CVNAMDLWQF TPLHEAASKN RVEVCSLLLS 301 350 ENSBTAP00000046048/1-1149 YGADPTLLNC HNKSAIDLAP TPQLKERLAY EFKGHSLLQA AREADVTRIK ENSP00000360689/1-1166 YGADPTLLNC HNKSAIDLAP TPQLKERLAY EFKGHSLLQA AREADVTRIK bmy_18891T0/1-1143 YGADPTLLNC HNKSAIDLAP TPQLKERLAY EFKGHSLLQA AREADVTRIK BACU019140/1-1155 YGADPTLLNC HNKSAIDLAP TPQLKERLAY EFKGHSLLQA AREADVTRIK ENSTTRP00000005899/1-1168 YGADPTLLNC HNKSAIDLAP TPQLKERLAY EFKGHSLLQA AREADVTRIK 351 400 ENSBTAP00000046048/1-1149 KHLSLEMVNF KHPQTHETAL HCAAASPYPK RKQICELLLR KGANINEKTK ENSP00000360689/1-1166 KHLSLEMVNF KHPQTHETAL HCAAASPYPK RKQICELLLR KGANINEKTK bmy_18891T0/1-1143 KHLSLEMVNF KHPQTHETAL HCAAASPYPK RKQICELLLR KGANINEKTK BACU019140/1-1155 KHLSLEMVNF KHPQTHETAL HCAAASPYPK RKQICELLLR KGANINEKTK ENSTTRP00000005899/1-1168 KHLSLEMVNF KHPQTHETAL HCAAASPYPK RKQICELLLR KGANINEKTK 401 450 ENSBTAP00000046048/1-1149 EFLTPLHVAS EKAHNDVVEV VVKHEAKVNA LDNLGQTSLH RAAHCGHLQT ENSP00000360689/1-1166 EFLTPLHVAS EKAHNDVVEV VVKHEAKVNA LDNLGQTSLH RAAYCGHLQT bmy_18891T0/1-1143 EFLTPLHVAS EKAHNDVVEV VVKHEAKVNA LDNLGQTSLH RAAHCGHLQT BACU019140/1-1155 EFLTPLHVAS EKAHNDVVEV VVKHEAKVNA LDNLGQTSLH RAAHCGHLQT ENSTTRP00000005899/1-1168 EFLTPLHVAS EKAHNDVVEV VVKHEAKVNA LDNLGQTSLH RAAHCGHLQT 451 500 ENSBTAP00000046048/1-1149 CRLLLSYGCD PNIISLQGFT ALQMGNENVQ QLLQEGIPLG NSEADRQLLE ENSP00000360689/1-1166 CRLLLSYGCD PNIISLQGFT ALQMGNENVQ QLLQEGISLG NSEADRQLLE bmy_18891T0/1-1143 CRLLLSYGCD PNIISLQGFT ALQMGNENVQ QLLQEGIPLG NSEADRQLLE BACU019140/1-1155 CRLLLSYGCD PNIISLQGFT ALQMGNENVQ QLLQEGIPLG NSEADRQLLE ENSTTRP00000005899/1-1168 CRLLLSYGCD PNIISLQGFT ALQMGNENVQ QLLQEGIPLG NSEADRQLLE 501 550 ENSBTAP00000046048/1-1149 AAKAGDVETV KKLCTVQSVN CRDIEGRQST PLHFAAGYNR VSVVEYLLQH ENSP00000360689/1-1166 AAKAGDVETV KKLCTVQSVN CRDIEGRQST PLHFAAGYNR VSVVEYLLQH bmy_18891T0/1-1143 AAKAGDVDTV KKLCTVQSVN CRDIEGRQST PLHFAAGYNR VSVVEYLLQH BACU019140/1-1155 AAKAGDVETV KKLCTVQSVN CRDIEGRQST PLHFAAGYNR VSVVEYLLQH ENSTTRP00000005899/1-1168 AAKAGDVETV KKLCTVQSVN CRDIEGRQST PLHFAAGYNR VSVVEYLLQH 551 600 ENSBTAP00000046048/1-1149 GADVHAKDKG ---------- GLVPLHNACS YGHYEVAELL VKHGAVVNVA ENSP00000360689/1-1166 GADVHAKDKG ---------- GLVPLHNACS YGHYEVAELL VKHGAVVNVA bmy_18891T0/1-1143 GADVHAKDKG QVPTIAMASL GLVPLHNACS YGHYEVAELL VKHGAVVNVA BACU019140/1-1155 GADVHAKDKG QVPTIAMASL GLVPLHNACS YGHYEVAELL VKHGAVVNVA ENSTTRP00000005899/1-1168 GADVHAKDKG ---------- GLVPLHNACS YGHYEVAELL VKHGAVVNVA 601 650 ENSBTAP00000046048/1-1149 DLWKFTPLHE AAAKGKYEIC KLLLQHGADP TKKNRDGNTP LDLVKEGDTD ENSP00000360689/1-1166 DLWKFTPLHE AAAKGKYEIC KLLLQHGADP TKKNRDGNTP LDLVKDGDTD bmy_18891T0/1-1143 DLWKFTPLHE AAAKGKYEIC KLLLQHGADP TKKNRDGNTP LDLVKDGDTD BACU019140/1-1155 DLWKFTPLHE AAAKGKYEIC KLLLQHGADP TKKNRDGNTP LDLVKDGDTD ENSTTRP00000005899/1-1168 DLWKFTPLHE AAAKGKYEIC KLLLQHGADP TKKNRDGNTP LDLVKDGDTD 651 700 ENSBTAP00000046048/1-1149 IQDLLRGDAA LLDAAKKGCL ARVKKLSSPD NVNCRDTQGR HSTPLHLAAG ENSP00000360689/1-1166 IQDLLRGDAA LLDAAKKGCL ARVKKLSSPD NVNCRDTQGR HSTPLHLAAG bmy_18891T0/1-1143 IQDLLRGDAA LLDAAKKGCL ARVKKLSSPD NVNCRDTQGR HSTPLHLAAG BACU019140/1-1155 IQDLLRGDAA LLDAAKKGCL ARVKKLSSPD NVNCRDTQGR HSTPLHLAAG ENSTTRP00000005899/1-1168 IQDLLRGDAA LLDAAKKGCL ARVKKLSSPD NVNCRDTQGR HSTPLHLAAG 701 750 ENSBTAP00000046048/1-1149 YNNLEVAEYL LQHGADVNAQ DKGGLIPLHN AASYGHVDVA ALLIKYNACV ENSP00000360689/1-1166 YNNLEVAEYL LQHGADVNAQ DKGGLIPLHN AASYGHVDVA ALLIKYNACV bmy_18891T0/1-1143 YNNLEVAEYL LQHGADVNAQ DKGGLIPLHN AASYGHVDVA ALLIKYNACV BACU019140/1-1155 YNNLEVAEYL LQHGADVNAQ DKGGLIPLHN AASYGHVDVA ALLIKYNACV ENSTTRP00000005899/1-1168 YNNLEVAEYL LQHGADVNAQ DKGGLIPLHN AASYGHVDVA ALLIKYNACV 751 800 ENSBTAP00000046048/1-1149 NATDKWAFTP LHEAAQKGRT QLCALLLAHG ADPTLKNQEG QTPLDLVSAD ENSP00000360689/1-1166 NATDKWAFTP LHEAAQKGRT QLCALLLAHG ADPTLKNQEG QTPLDLVSAD bmy_18891T0/1-1143 NATDKWAFTP LHEAAQKGRT QLCALLLAHG ADPTLKNQEG QTPLDLVSAD BACU019140/1-1155 NATDKWAFTP LHEAAQKGRT QLCALLLAHG ADPTLKNQEG QTPLDLVSAD ENSTTRP00000005899/1-1168 NATDKWAFTP LHEAAQKGRT QLCALLLAHG ADPTLKNQEG QTPLDLVSAD 801 850 ENSBTAP00000046048/1-1149 DVSALLTAAM PPSALPSCYK PQVLNGMRSP AATTDALSSG PSSPSSLSAA ENSP00000360689/1-1166 DVSALLTAAM PPSALPSCYK PQVLNGVRSP GATADALSSG PSSPSSLSAA bmy_18891T0/1-1143 DVSALLTAAM PPSALPSCYK SQVLNGVRSP GATADALSSG PSSPSSLSAA BACU019140/1-1155 DVSALLTAAM PPSALPSCYK SQVLNGVRSP GATADALSSG PSSPSSLSAA ENSTTRP00000005899/1-1168 DVSALLTAAM PPSALPSCYK SQVLNGVRSP GATADALSSG PSSPSSLSAA 851 900 ENSBTAP00000046048/1-1149 SSLDNLSGSF SELSSVVSSS GTEGASSLEK KEVPGIDFSI TQFVRNLGLE ENSP00000360689/1-1166 SSLDNLSGSF SELSSVVSSS GTEGASSLEK KEVPGVDFSI TQFVRNLGLE bmy_18891T0/1-1143 SSLDNLSGSF SELSSVVSSS GTEGASSLEK KEVPGVDFSI TQFVRNLGLE BACU019140/1-1155 SSLDNLSGSF SELSSVVSSS GTEGASSLEK KEVPGVDFSI TQFVRNLGLE ENSTTRP00000005899/1-1168 SSLDNLSGSF SELSSVVSSS GTEGASSLEK KEVPGVDFSI TQFVRNLGLE 901 950 ENSBTAP00000046048/1-1149 HLMDIFEREQ ITLDVLVEMG HKELKEIGIN AYGHRHKLIK GVERLISGQQ ENSP00000360689/1-1166 HLMDIFEREQ ITLDVLVEMG HKELKEIGIN AYGHRHKLIK GVERLISGQQ bmy_18891T0/1-1143 HLMDIFEREQ ITLDVLVEMG HKELKEIGIN AYGHRHKLIK GVERLISGQQ BACU019140/1-1155 HLMDIFEREQ ITLDVLVEMG HKELKEIGIN AYGHRHKLIK GVERLISGQQ ENSTTRP00000005899/1-1168 HLMDIFEREQ ITLDVLVEMG HKELKEIGIN AYGHRHKLIK GVERLISGQQ 951 1000 ENSBTAP00000046048/1-1149 GLNPYLTLNT SGSGTILIDL SAEDKEFQSV EEEMQSTVRE HRDGGHAGGI ENSP00000360689/1-1166 GLNPYLTLNT SGSGTILIDL SPDDKEFQSV EEEMQSTVRE HRDGGHAGGI bmy_18891T0/1-1143 GLNPYLTLNT SGSGTILIDL SPDDKEFQSV EEEMQSTVRE HRDGGHAGGI BACU019140/1-1155 GLNPYLTLNT SGSGTILIDL SPDDKEFQSV EEEMQSTVRE HRDGGHAGGI ENSTTRP00000005899/1-1168 GLNPYLTLNT SGSGTILIDL SPDDKEFQSV EEEMQSTVRE HRDGGHAGGI 1001 1050 ENSBTAP00000046048/1-1149 FNRYNILKIQ KVCNKKLWER YTHRRKEVSE ENHNHANERM LFHGSPFVNA ENSP00000360689/1-1166 FNRYNILKIQ KVCNKKLWER YTHRRKEVSE ENHNHANERM LFHGSPFVNA bmy_18891T0/1-1143 FNRYNILKVI R--------- ---------- ---------- ----SPFVNA BACU019140/1-1155 FNRYNILKIQ KVCNKKLWER YTHRRKEVSE ENHNHANERM LFHGSPFVNA ENSTTRP00000005899/1-1168 FNRYNILKIQ KVCNKKLWER YTHRRKEVSE ENHNHANERM LFHGSPFVNA 1051 1100 ENSBTAP00000046048/1-1149 IIHKGFDERH AYIGGMFGAG IYFAENSSKS NQYVYGIGGG TGCPVHKDRS ENSP00000360689/1-1166 IIHKGFDERH AYIGGMFGAG IYFAENSSKS NQYVYGIGGG TGCPVHKDRS bmy_18891T0/1-1143 IIHKGFDERH AYIGGMFGAG IYFAENSSKS NQYVYGIGGG TGCPVHKDRS BACU019140/1-1155 IIHKGFDERH AYIGGMFGAG IYFAENSSKS NQYVYGIGGG TGCPVHKDRS ENSTTRP00000005899/1-1168 IIHKGFDERH AYIGGMFGAG IYFAENSSKS NQYVYGIGGG TGCPVHKDRS 1101 1150 ENSBTAP00000046048/1-1149 CYICHRQLLF CRVTLGKSFL QFSAMKMAHS PPGHHSVTGR PSVNGLALAE ENSP00000360689/1-1166 CYICHRQLLF CRVTLGKSFL QFSAMKMAHS PPGHHSVTGR PSVNGLALAE bmy_18891T0/1-1143 CYICHRQLLF CRVTLGKSFL QFSAMKMAHS PPGHHSVTGR PSVNGLALAE BACU019140/1-1155 CYICHRQLLF CRVTLGKSFL QFSAMKMAHS PPGHHSVTGR PSVNGLALAE ENSTTRP00000005899/1-1168 CYICHRQLLF CRVTLGKSFL QFSAMKMAHS PPGHHSVTGR PSVNGLALAE 1151 1200 ENSBTAP00000046048/1-1149 YVIYRGEQAY PEYLITYQIV RPEGMVDG ENSP00000360689/1-1166 YVIYRGEQAY PEYLITYQIM RPEGMVDG bmy_18891T0/1-1143 YVIYRGEQAY PEYLITYQIV RPEGMVDG BACU019140/1-1155 YVIYRGEQAY PEYLITYQIV RPEGMVDG ENSTTRP00000005899/1-1168 YVIYRGEQAY PEYLITYQIV RPEGMVDG