KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:57:23 2014 Check: 00 .. Name: ENSP00000364814/1-280 Len: 298 Check: 1746 Weight: 1.00 Name: ENSBTAP00000046056/1-265 Len: 298 Check: 9378 Weight: 1.00 Name: bmy_09907T0/1-256 Len: 298 Check: 6222 Weight: 1.00 Name: ENSTTRP00000014887/1-268 Len: 298 Check: 193 Weight: 1.00 // 1 50 ENSP00000364814/1-280 ---------- ------MGSC VSRDLFTSAH KNCPMPQGAD PLNPDLPSGR ENSBTAP00000046056/1-265 ---------- ------LVSS FFPDLLTSAH KDCPMPQGMA PLNPDLPS-- bmy_09907T0/1-256 MNRPATLLQA GLGPRFLLSF FFPDLLTSTH KDCPMPQSTA PLNPDLPSSR ENSTTRP00000014887/1-268 ---------- ---------- ----LLTSTH KDCPMPQGTA PLSPDSPSSR 51 100 ENSP00000364814/1-280 TPTVAPDCVI GKDKQMDFCW DPWQRCFQTT NGYLSDSRSR PGNYNVAALA ENSBTAP00000046056/1-265 --IVAPDHVT GKDKRMDFCW DPWQRCFQTT NGHLSDSRSC SSNYSVAALA bmy_09907T0/1-256 PPIVAPDHVT GKDKQMDFCW DPWQRCFQTT NGYLSDSRSC SSNYNVAALA ENSTTRP00000014887/1-268 PPIVAPDHVI GKDKQMDFCW DPWQRCFQTT NGYLSDSRSC SSNYNVAALA 101 150 ENSP00000364814/1-280 TSSLVGVVQS IKDHITKPTA MARGRVAHLI EWKGWSAQPA GWELSP-AED ENSBTAP00000046056/1-265 TSSLVGVVQS IKDHITKPTA MARGRVAHLI EWKGWSVQRA GWELPPAAAE bmy_09907T0/1-256 TSSLVGVVQS IKDHITKPTA MARGRVAHLI EWKGWSAQRS GWELST-AED ENSTTRP00000014887/1-268 TSSLVGVVQS IKDHITKPTA MARGRVAHLI EWKGWSAQRS GWELST-AED 151 200 ENSP00000364814/1-280 EHYCCLPDEL REARFAAGVA EQFAITEATL SAWSSLDEEE LHPENSPQGI ENSBTAP00000046056/1-265 EHYCLLPDEL REARFAAGVA EQFAITEATL SVWSSLDDGE LGLESGPVDI bmy_09907T0/1-256 EHYCCLPDEL REARFAA--- ---------- ---------- ---------- ENSTTRP00000014887/1-268 EHYCCLPDEL REARFAAGVA EQFAITEATL SAWSSLDDEE LPPENSPQDV 201 250 ENSP00000364814/1-280 VQLQDLESIY LQDSLPSGPS QDDSLQAFSS PSPSPDSCPS PEEPPSTAGI ENSBTAP00000046056/1-265 LQLQDLGSVY LQDSLLSVRS QDDSLLAFSS ----PDGWPS PDEP------ bmy_09907T0/1-256 ----DLESIY LQDSLLSVPS QDDSLLAFSS ----PDGWPS PDEPPTIASG ENSTTRP00000014887/1-268 IQLQDLESIY LQDSLLSVPS QDDSLLAFSS ----PDGWPS SDEPPTIASG 251 300 ENSP00000364814/1-280 PQPPSPELQH RRRLPGAQGP EGGTHPPGSL PSMDSGSLW- EEDEVFYN ENSBTAP00000046056/1-265 ---PSPGWQL RPRLPGSLGP EAGARPQGPL RSGDGGLPSE EEDEVFYN bmy_09907T0/1-256 PQPPSPKQQH QQRLLGAPGP EEGARLQGSL PSVDSGSLSE EEDEVFYN ENSTTRP00000014887/1-268 PQPPSPEQQR WQRLLGAPGP EGGARLQGSL PSVDSGSLS- EEDEVFYN