KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 17:57:23 2014 Check: 00 ..
Name: ENSP00000247001/1-645 Len: 668 Check: 9657 Weight: 1.00
Name: ENSBTAP00000046060/1-635 Len: 668 Check: 1871 Weight: 1.00
Name: ENSTTRP00000009356/1-635 Len: 668 Check: 1834 Weight: 1.00
Name: bmy_02658T0/1-635 Len: 668 Check: 835 Weight: 1.00
Name: BACU016632/1-631 Len: 668 Check: 838 Weight: 1.00
//
1 50
ENSP00000247001/1-645 ---------- ---------- ---MSLKMDN RDVAGKANRW FGVAPPKSGK
ENSBTAP00000046060/1-635 ---------- ---------- ---MSLKMDN RDVAGKANRW FGVAPPKSGK
ENSTTRP00000009356/1-635 ---------- ---------- ---MSLKMDN RDVAGKANRW FGVAPPKSGK
bmy_02658T0/1-635 MRTITSAPPA PPAPGGSGAL WDWMSLKMDN RDVAGKANRW FGVAPPKSGK
BACU016632/1-631 ---------- ---------- -------MDN RDVAGKANRW FGVAPSKSGK
51 100
ENSP00000247001/1-645 MNMNILHQEE LIAQKKREIE AKMEQKAKQN QVASPQPPHP GEITNAHNSS
ENSBTAP00000046060/1-635 MNMNILHQEE LIAQKKREIE ARMEQKAKQN QAASPQPPHP GEIANVHNSN
ENSTTRP00000009356/1-635 MNMNILHQEE LIAQKKREIE AKMEQKAKQD QVASPQPRHP GEIANAHNSN
bmy_02658T0/1-635 MNMNILHQEE LIAQKKREIE AKMEQKAKQN QVASPQPRHP GEIANAHNSN
BACU016632/1-631 MNMNILHQEE LIAQKKREIE AKMEQKAKQN QVASPQPRHP GEIANAHNSN
101 150
ENSP00000247001/1-645 CISNKFANDG SFLQQFLKLQ KAQTSTDAPT SAPSAPPSTP TPSAGKRSLL
ENSBTAP00000046060/1-635 -VSNKFANDG SFLQQFLKLQ KAQTSTDAPP SAPTAPPRV- LPRTGKRPPL
ENSTTRP00000009356/1-635 -VSNKFANDG SFLQQFLKLQ KAQTSTDARP SAPAAPPRV- LPRTGKRPPL
bmy_02658T0/1-635 -VSNKFANDG SFLQQFLKLQ KAQTSTDAPP SAPAAPPRV- LPRTGKRPPL
BACU016632/1-631 -VSNKFANDG SFLQQFLKLQ KAQTSTDAPP SAPAAPPRV- LPRTGKRPPL
151 200
ENSP00000247001/1-645 ISRRTGLGLA SLPGPVKSYS HAKQLPVAHR PSVFQSPDED EEEDYEQWLE
ENSBTAP00000046060/1-635 IS-------- SPLGQVKNYM HAKQLPVASR PSVFQSPDED DEEDYEQWLE
ENSTTRP00000009356/1-635 IS-------- SPPGQMKNYV HAKQLPVASR PSVFQSPDED EEEDYEQWLE
bmy_02658T0/1-635 IS-------- SPPGQMKNYV HAKQLPVASR PSVFQSPDED EEEDYEQWLE
BACU016632/1-631 IS-------- SPPGQMKNYV HAKQLPVASR PSVFQSPDED EEEDYEQWLE
201 250
ENSP00000247001/1-645 IKVSPPEGAE TRKVIEKLAR FVAEGGPELE KVAMEDYKDN PAFAFLHDKN
ENSBTAP00000046060/1-635 IKVSPPEGAE TRKVIEKLAR FVAEGGPELE KVAMENYKDN PAFSFLHDKN
ENSTTRP00000009356/1-635 IKVSPPEGAE TRKVIEKLAR FVAEGGPELE KVAMENYKDN PAFSFLHDKN
bmy_02658T0/1-635 IK----EGAE TRKVIEKLAR FVAEGGPELE KVAMENYKDN PAFSFLHDKN
BACU016632/1-631 IKVSPPEGAE TRKVIEKLAR FVAEGGPELE KVAMENYKDN PAFSFLHDKN
251 300
ENSP00000247001/1-645 SREFLYYRKK VAEIRKEAQK SQAASQKVSP PEDEEVKNLA EKLARFIADG
ENSBTAP00000046060/1-635 SREFLYYRKK VAEIRKEAQK LQAAPQKVSP PEDEEVKNLA EKLARFIADG
ENSTTRP00000009356/1-635 SREFLYYRKK VAEIRKEAQK LQAASQKVSP PEDEEVKNLA EKLARFIADG
bmy_02658T0/1-635 SREFLYYRKK VAEIRKEAQK LQAAFQK--- -EDEEVKNLA EKLARFIADG
BACU016632/1-631 SREFLYYRKK VAEIRKEAQK LQAASQKVSP PEDEEVKNLA EKLARFIADG
301 350
ENSP00000247001/1-645 GPEVETIALQ NNRENQAFSF LYEPNSQGYK YYRQKLEEFR KAKASSTGSF
ENSBTAP00000046060/1-635 GPEVETIALQ NNRENQAFSF LYEPNSQGYK YYRQKLEEFR KAKAGPTGTP
ENSTTRP00000009356/1-635 GPEVETIALQ NNRENQAFSF LYEPNSQGYK YYRQKLEEFR KAKAGPTGTP
bmy_02658T0/1-635 GPEVETIALQ NNRENQAFSF LYEPNSQGYK YYRQKLEEFR KAKAGPTGTP
BACU016632/1-631 GPEVETIALQ NNRENQAFSF LYEPNSQGYK YYRQKLEEFR KAKAGPTGTP
351 400
ENSP00000247001/1-645 TAPDPGLKRK SPPEALSGSL PPATTCPASS TPAPTIIPAP AAPGKPASAA
ENSBTAP00000046060/1-635 MAPDLGLKRR SPPETPLGST PTATACPTSS APLPTANPPA AAPGKPATTA
ENSTTRP00000009356/1-635 TAPDLGLKRR SPPETPLGSM PTATACPTSS APLPNVNPSS AAPGKPATTA
bmy_02658T0/1-635 TAPDLGLKRR SPPETPLGSM PTATACPTSS APLPNVNPSS AAPGKPATTA
BACU016632/1-631 TAPDLGLKRR SPPETPLGSM PTATACPTSS APLPNVNPSS AAPGKPATTA
401 450
ENSP00000247001/1-645 TVKRKRKSRW GPEEDKVELP PAELVQRDVD ASPSPLSVQD LKGLGYEKGK
ENSBTAP00000046060/1-635 NVKRKRKSRW GPEEDKVELP PAELAQRDTD AAPSPLSVQD LKGLGYEKGK
ENSTTRP00000009356/1-635 NMKRKRKSRW GPEEDKVELP PAELVQRDVD ASPSPLSVQD LKGLGYEKGK
bmy_02658T0/1-635 NMKRKRKSRW GPEEDKVELP PAEL------ ---------D LKGLGYEKGK
BACU016632/1-631 NMKRKRKSRW GPEEDKVELP PAELVQRDVD ASPSPLSVQD LKGLGYEKGK
451 500
ENSP00000247001/1-645 PVGLVGVTEL SDAQKKQLKE QQEMQQMYDM IMQHKRAMQD MQLLWEKAVQ
ENSBTAP00000046060/1-635 PVGLVGVTEL SDAQKKQLKE QQEMQQMYDM IMQHKRAMQD MQLLWEKALQ
ENSTTRP00000009356/1-635 PVGLVGVTEL SDAQKKQLKE QQEMQQMYDM IMQHKRAMQD MQLLWEKALQ
bmy_02658T0/1-635 PVGLVGVTEL SDAQKKQLKE QQEMQQMYDM IMQHKRAMQD MQLLWEKALQ
BACU016632/1-631 PVGLVGVTEL SDAQKKQLKE QQEMQQMYDM IMQHKRAMQD MQLLWEKALQ
501 550
ENSP00000247001/1-645 QHQHGYDSDE EVDSELGTWE HQLRRMEMDK TREWAEQLTK MGRGKHFIGD
ENSBTAP00000046060/1-635 QHQHGYDSDE EVDSELGTWE HQLRRMEMDK TREWAEQLTK MGRGKHFIGD
ENSTTRP00000009356/1-635 QHQHGYDSDE EVDSELGTWE HQLRRMEMDK TREWAEQLTK MGRGKHFIGD
bmy_02658T0/1-635 QHQHGYDSDE EVDSELGTWE HQLRRMEMDK TREWAEQLTK MGRGKHFIGD
BACU016632/1-631 QHQHGYDSDE EVDSELGTWE HQLRRMEMDK TREWAEQLTK MGRGKHFIGD
551 600
ENSP00000247001/1-645 FLPPDELEKF METFKALKEG REPDYSEYKE FKLTVENIGY QMLMKMGWKE
ENSBTAP00000046060/1-635 FLPPDELEKF METFKALKEG REPDYSEYKE FKLTIENIGY QMLMKMGWKE
ENSTTRP00000009356/1-635 FLPPDELEKF METFKALKEG REPDYSEYKE FKLTIENIGY QMLMKMGWKE
bmy_02658T0/1-635 FLPPDELEKF METFKALKEG REPDYSEYKE FKLTIENIGY QMLMKMGWKE
BACU016632/1-631 FLPPDELEKF METFKALKEG REPDYSEYKE FKLTIENIGY QMLMKMGWKE
601 650
ENSP00000247001/1-645 GEGLGSEGQG IKNPVNKGTT TVDGAGFGID RPAELSKEDD EYEAFRKRMM
ENSBTAP00000046060/1-635 GDGLGSEGQG IKNPVNKGTT TVDGAGFGID RPAELSKEDD EYEAFRKRMM
ENSTTRP00000009356/1-635 GDGLGSEGQG IKNPVNKGTT TVDGAGFGID RPAELSKEDD EYEAFRKRMM
bmy_02658T0/1-635 GDGLGSEGQG IKNPVNKGTT TVDGAGFGID RPAELSKEDD EYEAFRKRMM
BACU016632/1-631 GDGLGSEGQG IKNPVNKGTT TVDGAGFGID RPAELSKEDD EYEAFRKRMM
651 700
ENSP00000247001/1-645 LAYRFRPNPL NNPRRPYY
ENSBTAP00000046060/1-635 LAYRFRPNPL NNPRRPYY
ENSTTRP00000009356/1-635 LAYRFRPNPL NNPRRPYY
bmy_02658T0/1-635 LAYRFRPNPL NNPRRPYY
BACU016632/1-631 LAYRFRPNPL NNPRRPYY