KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:23 2014 Check: 00 .. Name: ENSP00000247001/1-645 Len: 668 Check: 9657 Weight: 1.00 Name: ENSBTAP00000046060/1-635 Len: 668 Check: 1871 Weight: 1.00 Name: ENSTTRP00000009356/1-635 Len: 668 Check: 1834 Weight: 1.00 Name: bmy_02658T0/1-635 Len: 668 Check: 835 Weight: 1.00 Name: BACU016632/1-631 Len: 668 Check: 838 Weight: 1.00 // 1 50 ENSP00000247001/1-645 ---------- ---------- ---MSLKMDN RDVAGKANRW FGVAPPKSGK ENSBTAP00000046060/1-635 ---------- ---------- ---MSLKMDN RDVAGKANRW FGVAPPKSGK ENSTTRP00000009356/1-635 ---------- ---------- ---MSLKMDN RDVAGKANRW FGVAPPKSGK bmy_02658T0/1-635 MRTITSAPPA PPAPGGSGAL WDWMSLKMDN RDVAGKANRW FGVAPPKSGK BACU016632/1-631 ---------- ---------- -------MDN RDVAGKANRW FGVAPSKSGK 51 100 ENSP00000247001/1-645 MNMNILHQEE LIAQKKREIE AKMEQKAKQN QVASPQPPHP GEITNAHNSS ENSBTAP00000046060/1-635 MNMNILHQEE LIAQKKREIE ARMEQKAKQN QAASPQPPHP GEIANVHNSN ENSTTRP00000009356/1-635 MNMNILHQEE LIAQKKREIE AKMEQKAKQD QVASPQPRHP GEIANAHNSN bmy_02658T0/1-635 MNMNILHQEE LIAQKKREIE AKMEQKAKQN QVASPQPRHP GEIANAHNSN BACU016632/1-631 MNMNILHQEE LIAQKKREIE AKMEQKAKQN QVASPQPRHP GEIANAHNSN 101 150 ENSP00000247001/1-645 CISNKFANDG SFLQQFLKLQ KAQTSTDAPT SAPSAPPSTP TPSAGKRSLL ENSBTAP00000046060/1-635 -VSNKFANDG SFLQQFLKLQ KAQTSTDAPP SAPTAPPRV- LPRTGKRPPL ENSTTRP00000009356/1-635 -VSNKFANDG SFLQQFLKLQ KAQTSTDARP SAPAAPPRV- LPRTGKRPPL bmy_02658T0/1-635 -VSNKFANDG SFLQQFLKLQ KAQTSTDAPP SAPAAPPRV- LPRTGKRPPL BACU016632/1-631 -VSNKFANDG SFLQQFLKLQ KAQTSTDAPP SAPAAPPRV- LPRTGKRPPL 151 200 ENSP00000247001/1-645 ISRRTGLGLA SLPGPVKSYS HAKQLPVAHR PSVFQSPDED EEEDYEQWLE ENSBTAP00000046060/1-635 IS-------- SPLGQVKNYM HAKQLPVASR PSVFQSPDED DEEDYEQWLE ENSTTRP00000009356/1-635 IS-------- SPPGQMKNYV HAKQLPVASR PSVFQSPDED EEEDYEQWLE bmy_02658T0/1-635 IS-------- SPPGQMKNYV HAKQLPVASR PSVFQSPDED EEEDYEQWLE BACU016632/1-631 IS-------- SPPGQMKNYV HAKQLPVASR PSVFQSPDED EEEDYEQWLE 201 250 ENSP00000247001/1-645 IKVSPPEGAE TRKVIEKLAR FVAEGGPELE KVAMEDYKDN PAFAFLHDKN ENSBTAP00000046060/1-635 IKVSPPEGAE TRKVIEKLAR FVAEGGPELE KVAMENYKDN PAFSFLHDKN ENSTTRP00000009356/1-635 IKVSPPEGAE TRKVIEKLAR FVAEGGPELE KVAMENYKDN PAFSFLHDKN bmy_02658T0/1-635 IK----EGAE TRKVIEKLAR FVAEGGPELE KVAMENYKDN PAFSFLHDKN BACU016632/1-631 IKVSPPEGAE TRKVIEKLAR FVAEGGPELE KVAMENYKDN PAFSFLHDKN 251 300 ENSP00000247001/1-645 SREFLYYRKK VAEIRKEAQK SQAASQKVSP PEDEEVKNLA EKLARFIADG ENSBTAP00000046060/1-635 SREFLYYRKK VAEIRKEAQK LQAAPQKVSP PEDEEVKNLA EKLARFIADG ENSTTRP00000009356/1-635 SREFLYYRKK VAEIRKEAQK LQAASQKVSP PEDEEVKNLA EKLARFIADG bmy_02658T0/1-635 SREFLYYRKK VAEIRKEAQK LQAAFQK--- -EDEEVKNLA EKLARFIADG BACU016632/1-631 SREFLYYRKK VAEIRKEAQK LQAASQKVSP PEDEEVKNLA EKLARFIADG 301 350 ENSP00000247001/1-645 GPEVETIALQ NNRENQAFSF LYEPNSQGYK YYRQKLEEFR KAKASSTGSF ENSBTAP00000046060/1-635 GPEVETIALQ NNRENQAFSF LYEPNSQGYK YYRQKLEEFR KAKAGPTGTP ENSTTRP00000009356/1-635 GPEVETIALQ NNRENQAFSF LYEPNSQGYK YYRQKLEEFR KAKAGPTGTP bmy_02658T0/1-635 GPEVETIALQ NNRENQAFSF LYEPNSQGYK YYRQKLEEFR KAKAGPTGTP BACU016632/1-631 GPEVETIALQ NNRENQAFSF LYEPNSQGYK YYRQKLEEFR KAKAGPTGTP 351 400 ENSP00000247001/1-645 TAPDPGLKRK SPPEALSGSL PPATTCPASS TPAPTIIPAP AAPGKPASAA ENSBTAP00000046060/1-635 MAPDLGLKRR SPPETPLGST PTATACPTSS APLPTANPPA AAPGKPATTA ENSTTRP00000009356/1-635 TAPDLGLKRR SPPETPLGSM PTATACPTSS APLPNVNPSS AAPGKPATTA bmy_02658T0/1-635 TAPDLGLKRR SPPETPLGSM PTATACPTSS APLPNVNPSS AAPGKPATTA BACU016632/1-631 TAPDLGLKRR SPPETPLGSM PTATACPTSS APLPNVNPSS AAPGKPATTA 401 450 ENSP00000247001/1-645 TVKRKRKSRW GPEEDKVELP PAELVQRDVD ASPSPLSVQD LKGLGYEKGK ENSBTAP00000046060/1-635 NVKRKRKSRW GPEEDKVELP PAELAQRDTD AAPSPLSVQD LKGLGYEKGK ENSTTRP00000009356/1-635 NMKRKRKSRW GPEEDKVELP PAELVQRDVD ASPSPLSVQD LKGLGYEKGK bmy_02658T0/1-635 NMKRKRKSRW GPEEDKVELP PAEL------ ---------D LKGLGYEKGK BACU016632/1-631 NMKRKRKSRW GPEEDKVELP PAELVQRDVD ASPSPLSVQD LKGLGYEKGK 451 500 ENSP00000247001/1-645 PVGLVGVTEL SDAQKKQLKE QQEMQQMYDM IMQHKRAMQD MQLLWEKAVQ ENSBTAP00000046060/1-635 PVGLVGVTEL SDAQKKQLKE QQEMQQMYDM IMQHKRAMQD MQLLWEKALQ ENSTTRP00000009356/1-635 PVGLVGVTEL SDAQKKQLKE QQEMQQMYDM IMQHKRAMQD MQLLWEKALQ bmy_02658T0/1-635 PVGLVGVTEL SDAQKKQLKE QQEMQQMYDM IMQHKRAMQD MQLLWEKALQ BACU016632/1-631 PVGLVGVTEL SDAQKKQLKE QQEMQQMYDM IMQHKRAMQD MQLLWEKALQ 501 550 ENSP00000247001/1-645 QHQHGYDSDE EVDSELGTWE HQLRRMEMDK TREWAEQLTK MGRGKHFIGD ENSBTAP00000046060/1-635 QHQHGYDSDE EVDSELGTWE HQLRRMEMDK TREWAEQLTK MGRGKHFIGD ENSTTRP00000009356/1-635 QHQHGYDSDE EVDSELGTWE HQLRRMEMDK TREWAEQLTK MGRGKHFIGD bmy_02658T0/1-635 QHQHGYDSDE EVDSELGTWE HQLRRMEMDK TREWAEQLTK MGRGKHFIGD BACU016632/1-631 QHQHGYDSDE EVDSELGTWE HQLRRMEMDK TREWAEQLTK MGRGKHFIGD 551 600 ENSP00000247001/1-645 FLPPDELEKF METFKALKEG REPDYSEYKE FKLTVENIGY QMLMKMGWKE ENSBTAP00000046060/1-635 FLPPDELEKF METFKALKEG REPDYSEYKE FKLTIENIGY QMLMKMGWKE ENSTTRP00000009356/1-635 FLPPDELEKF METFKALKEG REPDYSEYKE FKLTIENIGY QMLMKMGWKE bmy_02658T0/1-635 FLPPDELEKF METFKALKEG REPDYSEYKE FKLTIENIGY QMLMKMGWKE BACU016632/1-631 FLPPDELEKF METFKALKEG REPDYSEYKE FKLTIENIGY QMLMKMGWKE 601 650 ENSP00000247001/1-645 GEGLGSEGQG IKNPVNKGTT TVDGAGFGID RPAELSKEDD EYEAFRKRMM ENSBTAP00000046060/1-635 GDGLGSEGQG IKNPVNKGTT TVDGAGFGID RPAELSKEDD EYEAFRKRMM ENSTTRP00000009356/1-635 GDGLGSEGQG IKNPVNKGTT TVDGAGFGID RPAELSKEDD EYEAFRKRMM bmy_02658T0/1-635 GDGLGSEGQG IKNPVNKGTT TVDGAGFGID RPAELSKEDD EYEAFRKRMM BACU016632/1-631 GDGLGSEGQG IKNPVNKGTT TVDGAGFGID RPAELSKEDD EYEAFRKRMM 651 700 ENSP00000247001/1-645 LAYRFRPNPL NNPRRPYY ENSBTAP00000046060/1-635 LAYRFRPNPL NNPRRPYY ENSTTRP00000009356/1-635 LAYRFRPNPL NNPRRPYY bmy_02658T0/1-635 LAYRFRPNPL NNPRRPYY BACU016632/1-631 LAYRFRPNPL NNPRRPYY