KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:57:28 2014 Check: 00 .. Name: ENSBTAP00000046105/1-276 Len: 362 Check: 7706 Weight: 1.00 Name: ENSP00000355211/1-340 Len: 362 Check: 8245 Weight: 1.00 Name: bmy_20480T0/1-348 Len: 362 Check: 4859 Weight: 1.00 Name: ENSTTRP00000014147/1-348 Len: 362 Check: 3061 Weight: 1.00 // 1 50 ENSBTAP00000046105/1-276 ---------- -MARDLIGPA LPPGFKAGGS AEDEERDSSP VAGPALPPNY ENSP00000355211/1-340 ---------- -MARDLIGPA LPPGFKARGT AEDEERDPSP VAGPALPPNY bmy_20480T0/1-348 ---------- -MARDLIGPA LPPGFKASGS AEDEERDPSP VAGPALPPNY ENSTTRP00000014147/1-348 TCVRDQCLPP RMARDLIGPA LPPGFKASGS AEDEERDPSP VAGPALPPNY 51 100 ENSBTAP00000046105/1-276 KSSSSESSDS DEDSSSLSEE GNQESEEDDT GPPARKLRRN QDDDDDDDDE ENSP00000355211/1-340 KSSSSDSSDS DEDSSSLYEE GNQESEEDDS GPTARKQRKN QDDDDDDDD- bmy_20480T0/1-348 KSSSSKSSDS DEDSSSLSEE GNQESEEXDT GPTARKQRRN QDDDDDDDE- ENSTTRP00000014147/1-348 KSSSSKSSDS DEDSSSLSEE GNQESEEDDT GPTAR-QRRN QDDDDDDDE- 101 150 ENSBTAP00000046105/1-276 GFFGPALPPG FKKQDDSPPR PMIGPALPPG FLKSTQKSDE GRSDPGQVSS ENSP00000355211/1-340 GFFGPALPPG FKKQDDSPPR PIIGPALPPG FIKSTQKSDK GRDDPGQ--- bmy_20480T0/1-348 GFFGPALPPG FKKQDDSPPR PIIGPALPPG FLKSAQKSDK GRDDPRQVSS ENSTTRP00000014147/1-348 RVFGPA-PPG FKKQDDSPPR PIIGPALPPG FLKSAQKSDK GRDDPRQ--- 151 200 ENSBTAP00000046105/1-276 DFNSEKETDS SEEEDIVGPM PAKGPVNSSV TAEFEKRAQR MKEKLTKGDD ENSP00000355211/1-340 -----QETDS SEDEDIIGPM PAKGPVNYNV TTEFEKRAQR MKEKLTKGDD bmy_20480T0/1-348 YFNSEKETGS SEEEDIIGPM PAKGPVNSSV TTEFEKRAQR MKEKLTKGDD ENSTTRP00000014147/1-348 ------ETGS SEEEDIIGPM PAKGPVNSSV TTEFEKRAQR MKEKLTKGDD 201 250 ENSBTAP00000046105/1-276 DSSKPITRES WMTELPPEMK DFGLGPRTFK RRADGKSGDR SVWTDTPADR ENSP00000355211/1-340 DSSKPIVRES WMTELPPEMK DFGLGPRTFK RRADDTSGDR SIWTDTPADR bmy_20480T0/1-348 DSSKPITRES WMTELPPELK DFGLGPRTFK RRAADKSGDR SVWTDMPADR ENSTTRP00000014147/1-348 DSSKTITRDS WMTELPPELK NFGLGPRTFK RRADDKSGDR SVWTDMPADR 251 300 ENSBTAP00000046105/1-276 ERKAK----- ---------- --VRGL---V CSCISVHVGS ---------- ENSP00000355211/1-340 ERKAKETQEA RKSSSKKDEE HILSGRDKRL AEQVSSYNES KRSESLMDIH bmy_20480T0/1-348 ERKAKETPEA RKSFSKKDEE HILTGMEKRL AEQVSAYNES KRSESLMDIH ENSTTRP00000014147/1-348 ERKAKETPEA RKSFNKKDEE HILTGMEKRL AEQVSAYNES KRPESLMDIH 301 350 ENSBTAP00000046105/1-276 ---------- ---------- ---------- ---------I LKNRRQNYSR ENSP00000355211/1-340 HKKLKSKAAE DKNKPQERIP FDRDKDLKVN RFDEAQKKAL IKKSRELNTR bmy_20480T0/1-348 QKKLKNKAAE DKNKPQERIP FNRDTDLKVH RFDEAQKKAL IKKSRELNTR ENSTTRP00000014147/1-348 QKKLKNKTAE DKNKPQERIP FNRDTDLKVH RFDEAQKKAL IKKSRELNTR 351 400 ENSBTAP00000046105/1-276 V------LFL SL ENSP00000355211/1-340 FSHGKGNMFL -- bmy_20480T0/1-348 FSHGKGNMFL -- ENSTTRP00000014147/1-348 FSHGKGNMFL --