KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:28 2014 Check: 00 .. Name: ENSP00000407763/1-273 Len: 275 Check: 6781 Weight: 1.00 Name: ENSBTAP00000046134/1-275 Len: 275 Check: 8068 Weight: 1.00 Name: BACU012169/1-65 Len: 275 Check: 9019 Weight: 1.00 Name: ENSTTRP00000015115/1-221 Len: 275 Check: 9760 Weight: 1.00 Name: bmy_17916T0/1-249 Len: 275 Check: 7837 Weight: 1.00 // 1 50 ENSP00000407763/1-273 MSDNKERKSQ GFPKE--DNQ DTSSLADAVE KVAKQQQSQA SEIEKNKKVL ENSBTAP00000046134/1-275 RMSENERKSQ GVPKEALAKQ DTSSLTDAVE QVAKQQQSQT SEIERNRKVL BACU012169/1-65 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015115/1-221 MSGNEERKSQ GVPEE--AKQ DISSLTDAVE QVAQQQQSQA SEIEKHKKVL bmy_17916T0/1-249 MSGNKERKSQ GVPEEALAKQ DTSSLTDAVE QVAQQQQSQT SEIEKNKKFL 51 100 ENSP00000407763/1-273 FNLKNELHEL EKEIAAISAE TKETERQIYQ QDSAIENTKL HCDSLETQIK ENSBTAP00000046134/1-275 FHLQNELHEL ETQIASVSAE TKETERQIYQ QDAAIQNTRL QCGDLENQIK BACU012169/1-65 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015115/1-221 FNLQNELHEL KTQIASVSAE TKETERQIYQ QDAAIQTTKL QCGNLENQIK bmy_17916T0/1-249 FHLQNELHEL KTQIASVSAE TKETERQIYQ QDAAIQNTKL QCGNLENQIK 101 150 ENSP00000407763/1-273 SLHSENVKLK FDIETAQEDF EEHMIKYNAY YAKIKAHKNS LGEVESKWSF ENSBTAP00000046134/1-275 SLHVENVKLK SDIETAQENF EEQMIKYNEY YAKIKAHKDS LREVENKWSF BACU012169/1-65 ---------- ---------- ---MIRYNEY YAKIKAHKDS LREVESKWSF ENSTTRP00000015115/1-221 SLHTENVKLK FDIEAAQEDF EEQMIRYNEY YAKIKAHKDS LREVESKWSF bmy_17916T0/1-249 SLHTEKVKLK FDIEAAQEDF EEQMIRYNEY YAKIKAHKDX LREVESKWSF 151 200 ENSP00000407763/1-273 MTELHEKRDF VKKLKTMKEE LMQDLQNPGG NRITQVQEDI TNLKDKIITV ENSBTAP00000046134/1-275 MTELNEKRDL VKKLKTMKEE LKLDLQNPEG NLMRQAQEDI TKLKDEITSV BACU012169/1-65 MTELDEKRDL VKKLKTMKEE LMQDLQNPEG NLMKQVQV-- ---------- ENSTTRP00000015115/1-221 MTELNEKR-L VKN-KTMKEE LMQHLQNRR- NLMKQVQEDI INLKDKIITV bmy_17916T0/1-249 MTELNEKRDL VKKLKTMKEE XMQDLQNPEG NLMKQVQEDI TNLKDKIITV 201 250 ENSP00000407763/1-273 KESIIEKTCF LEEEKKTHEK LRKEIEVQHK RYDAILKRLH CQVNKLQSNR ENSBTAP00000046134/1-275 EESISEQTCF LEEEIKTHEK LRKEIEVQHK RYGAILKRLH CQVNKLHSNR BACU012169/1-65 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000015115/1-221 KESIIEKTCF LEEEKKTHEK LRKEIE---- ---------- ---------- bmy_17916T0/1-249 KESIXEKTCF LEEEKKTHEK LRKEIEIIEM QHNNKEDKTH ---------- 251 300 ENSP00000407763/1-273 RQWQWNIQQL EKTAAELRKC IGMQE ENSBTAP00000046134/1-275 RQWQWNIQQL EKTAAELRKR IGMKD BACU012169/1-65 ---------- ---------- ----- ENSTTRP00000015115/1-221 ---------- ---------- ----- bmy_17916T0/1-249 ---------- ------FERG HGLVX