KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:28 2014 Check: 00 .. Name: ENSP00000431800/1-357 Len: 384 Check: 6836 Weight: 1.00 Name: ENSBTAP00000046146/1-384 Len: 384 Check: 7885 Weight: 1.00 Name: bmy_18088T0/1-363 Len: 384 Check: 9380 Weight: 1.00 Name: ENSTTRP00000015723/1-355 Len: 384 Check: 6402 Weight: 1.00 Name: BACU004471/1-208 Len: 384 Check: 2698 Weight: 1.00 // 1 50 ENSP00000431800/1-357 ---------- -----MATPA VPVSAPPATP TPVPAA---- --------AP ENSBTAP00000046146/1-384 SNSLPSAPRS FSLDKMATPA VPASAPPATP SEAPAAASSP ASAPVPAPAP bmy_18088T0/1-363 ---------- -----MATPA VPPSAPPATP TETPAAASDP A----PAPAP ENSTTRP00000015723/1-355 ---------- -----MATPA VPPSTPPATP TETPAA---- --------AP BACU004471/1-208 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000431800/1-357 ASVPAPTPAP AAAPVPAAAP ASSSDPAAAA AATAAPGQTP ASAQAPAQTP ENSBTAP00000046146/1-384 ASASAPAPSP APAAAPSPAP ASSSDPAAAA ATTAAPGQTP ASAPAPAQTP bmy_18088T0/1-363 ASASAPAPAP VP--APTPAP ASSSDPAAAA ATTAAPGQTP ASAPAPAQTP ENSTTRP00000015723/1-355 ASVSAPAPAP VP--APTPAP ASSSDPAAAA ATTAAPGQTP ASALAPAQAP BACU004471/1-208 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000431800/1-357 APALPGPALP GPFPGGRVVR LHPVILASIV DSYERRNEGA ARVIGTLLGT ENSBTAP00000046146/1-384 AQSLSGPALP GPFPGGRVVR LHPVILASIV DSYERRNEGA ARVIGTLLGT bmy_18088T0/1-363 AQSLPGPALP GPFPGGRVVR LHPVILASIV DSYERRNEGA ARVIGTLLGT ENSTTRP00000015723/1-355 AQSLPGPALP GPFPGGRVVR LHPVILASIV DSYERRNEGA ARVIGTLLGT BACU004471/1-208 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000431800/1-357 VDKHSVEVTN CFSVPHNESE DEVAVDMEFA KNMYELHKKV SPNELILGWY ENSBTAP00000046146/1-384 VDKHSVEVTN CFSVPHNESE DEVAVDMEFA KNMYELHKKV SPNELILGWY bmy_18088T0/1-363 VDKHSVEVTN CFSVPHNESE DEVAVDMEFA KNMYELHKKV SPNELILGWY ENSTTRP00000015723/1-355 VDKHSVEVTN CFSVPHNESE DEVAVDMEFA KNMYELHKKV SPNELILGWY BACU004471/1-208 ---------- ---------- ------MEFA KNMYELHKKV SPNELILGWY 201 250 ENSP00000431800/1-357 ATGHDITEHS VLIHEYYSRE APNPIHLTVD TSLQNGRMSI KAYVSTLMGV ENSBTAP00000046146/1-384 ATGHDITEHS VLIHEYYSRE APNPIHLTVD TSLQNGRMSI KAYVSTLMGV bmy_18088T0/1-363 ATGHDITEHS VLIHEYYSRE APNPIHLTVD TSLQNGRMSI KAYVSTLMGV ENSTTRP00000015723/1-355 ATGHDITEHS VLIHEYYSRE APNPIHLTVD TSLQNGRMSI KAYVSTLMGV BACU004471/1-208 ATGHDITEHS VLIHEYYSRE APNPIHLTVD TSLQNGRMSI KAYVSTLMGV 251 300 ENSP00000431800/1-357 PGRTMGVMFT PLTVKYAYYD TERIGVDLIM KTCFSPNRVI GLSSDLQQVG ENSBTAP00000046146/1-384 PGRTMGVMFT PLTVKYTYYD TERIGVDLIM KTCFSPNRVI GLSSDLQQVG bmy_18088T0/1-363 PGRTMGVMFT PLTVKYAYYD TERIGVDLIM KTCFSPNRVI GLSSDLQQVG ENSTTRP00000015723/1-355 PGRTMGVMFT PLTVKYAYYD TERIGVDLIM KTCFSPNRVI GLSSDLQQVG BACU004471/1-208 PGRTMGVMFT PLTVKYAYYD TERIGVDLIM KTCFSPNRVI GLSSDLQQVG 301 350 ENSP00000431800/1-357 GASARIQDAL STVLQYAEDV LSGKVSADNT VGRFLMSLVN QVPKIVPDDF ENSBTAP00000046146/1-384 GASARIQDAL STVLQYAEDV LSGKVSADNT VGRFLMSLVN QVPKIVPEDF bmy_18088T0/1-363 GASARIQDAL STVLQYAEDV LSGKVSADNT VGRFLMSLVN QVPKIVPEDF ENSTTRP00000015723/1-355 GASARIQDAL STVLQYAEDV LSGKVSADNT VGRFLMSLVN QVPKIVPEDF BACU004471/1-208 GASARIQDAL STVLQYAEDV LSGKVSADNT VGRFLMSLVN QVPKIVPEDF 351 400 ENSP00000431800/1-357 ETMLNSNIND LLMVTYLANL TQSQIALNEK LVNL ENSBTAP00000046146/1-384 ETMLNSNIND LLMVTYLANL TQSQIALNEK LVNL bmy_18088T0/1-363 ETMLNSNIND LLMVTYLANL TQSQIALNEK LVNL ENSTTRP00000015723/1-355 ETMLNSNIND LLMVTYLANL TQSQIALNEK LVNL BACU004471/1-208 ETMLNSNIND LLMVTYLANL TQSQIALNEK LVNL