KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:29 2014 Check: 00 .. Name: bmy_18914T0/1-256 Len: 257 Check: 9342 Weight: 1.00 Name: ENSTTRP00000014759/1-149 Len: 257 Check: 8458 Weight: 1.00 Name: ENSP00000368523/1-150 Len: 257 Check: 3867 Weight: 1.00 Name: BACU012166/1-166 Len: 257 Check: 5382 Weight: 1.00 Name: ENSBTAP00000046155/1-149 Len: 257 Check: 8551 Weight: 1.00 // 1 50 bmy_18914T0/1-256 MALRMPKAGP CTRRRQNLFD KSSIDRCFGA EVLKCDKVAS IYIKVTSKVT ENSTTRP00000014759/1-149 ---------- -------MAA RGGVAGA--V ESLRYAE--- ---------- ENSP00000368523/1-150 ---------- -------MAA RGVIAPV--G ESLRYAE--- ---------- BACU012166/1-166 MAARGGVATA SEGLRYAEAA RGGVATA--S EGLRYAE--- ---------- ENSBTAP00000046155/1-149 ---------- -------MAA RVGVAPA--G DGLRYSG--- ---------- 51 100 bmy_18914T0/1-256 LSPWRRRPSC LTPRPHTKRS DANSD-RGLA RSLIAVGLGI AALGFSGHCA ENSTTRP00000014759/1-149 ---------- -DSQPPTKRS DADTD-SRLA RSLIAVGLGI AALGFAGRYT ENSP00000368523/1-150 ---------- -YLQPSAKRP DADVDQQRLV RSLIAVGLGV AALAFAGRYA BACU012166/1-166 ---------- -DSPPPTKRS DTDID-RRLA RSLIAVGLGV ATLGFAGRYT ENSBTAP00000046155/1-149 ---------- -SLQPPAQPS DADLD-RGLA RSLIAVGLGI AALGFAGRYA 101 150 bmy_18914T0/1-256 FQIWKPLGQV ITETAKKISA PSFSSYYKGG FEQKMNRGTC VLPKKTECVG ENSTTRP00000014759/1-149 SQIWKPLGQV ITETAKKIST PSFSSYYKGG FEQKMSR--- ---------- ENSP00000368523/1-150 FRIWKPLEQV ITETAKKIST PSFSSYYKGG FEQKMSR--- ---------- BACU012166/1-166 FQIWKPLGQV ITETAKKIST PSFSSYYKGG FEQKMSR--- ---------- ENSBTAP00000046155/1-149 FQIWKPLGQV ITETAKKIST PSFSSYYKGG FEQKMSR--- ---------- 151 200 bmy_18914T0/1-256 AKRKKSPTTA LHKPQLRRAA LAGGAPPLPS SRCTVTTAYT MKKLKYIVEW ENSTTRP00000014759/1-149 ---------- ------QEAS LILGVXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000368523/1-150 ---------- ------REAG LILGVSPSAG KAKIRTAHRR VMILNHPDKG BACU012166/1-166 ---------- ------REAS LILGVSPSAG KAKIRAAHRR IMILNHPDKG ENSBTAP00000046155/1-149 ---------- ------REAS LILGVSPSAS KAKIRAAHRR IMILNHPDKG 201 250 bmy_18914T0/1-256 KNSFLSVSSS ISVFTKKGEQ ENRLYDYVFP EDLVRKANMR KIMLKNWYAE ENSTTRP00000014759/1-149 GSPYLA---- ----TKINEA KDLL------ ---------- ---------- ENSP00000368523/1-150 GSPYVA---- ----AKINEA KDLL------ ---------- ---------- BACU012166/1-166 GSPYLA---- ----TKINEA KDLL------ ---------- ---------- ENSBTAP00000046155/1-149 GSPYLA---- ----TKINEA KDLL------ ---------- ---------- 251 300 bmy_18914T0/1-256 SDTVEEQ ENSTTRP00000014759/1-149 -EAATKH ENSP00000368523/1-150 -ETTTKH BACU012166/1-166 -EAATKH ENSBTAP00000046155/1-149 -EATTKH