KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:31 2014 Check: 00 .. Name: ENSP00000280191/1-305 Len: 354 Check: 1845 Weight: 1.00 Name: ENSBTAP00000046266/1-352 Len: 354 Check: 1555 Weight: 1.00 Name: ENSTTRP00000014259/1-302 Len: 354 Check: 9358 Weight: 1.00 Name: bmy_03965T0/1-290 Len: 354 Check: 7630 Weight: 1.00 Name: BACU013313/1-267 Len: 354 Check: 1691 Weight: 1.00 // 1 50 ENSP00000280191/1-305 MAAAGQEKGY LTQTAAALDK SPSLSPQLAA PIRGRPKKCL VYPHAPKSSR ENSBTAP00000046266/1-352 MAAAGPRGGL LTQPAAARPK TRSVLPCQAA PNGQKPKKCL VYPHPPKSSR ENSTTRP00000014259/1-302 MAAAGLGGEL LTLP--TVPK SPSLAPRPAA PMRGRPKKCL VYPHPPKRSR bmy_03965T0/1-290 MAAAGLGGEL LTLP--TVPK SPSLAPRPAA PMRGRPKKCL VYPHPPKSSR BACU013313/1-267 MAAAGRGGEL LTLPAATLPK SPSLAPRPAA PMRGRPKKCL VYPHPPKSSR 51 100 ENSP00000280191/1-305 LSRSVLRWLQ GLDLSFFPRN INRDFSNGFL IAEIFCIYYP WELELSSFEN ENSBTAP00000046266/1-352 LSRSVLRWLQ SLDLTFFPRN ISRDFSNGFL IAEIFTTYYP WDLKLSSFKN ENSTTRP00000014259/1-302 VSPSVLRWLQ GLDLSFFPRN INRDFSNGFL IAEIFTVHYP WDLKLSSFKN bmy_03965T0/1-290 VSPSVLRWLQ GLDLSFFPRN ISRDFSNGFL IAEIFTXHYP RDLKLSSFKN BACU013313/1-267 VSPSVLRWLQ GLDLSFFPRN ISRDFSNGFL IAEIFTVHYP RDLKLSSFKN 101 150 ENSP00000280191/1-305 GTSLKVKLDN WAQLEKFLAR KKFKLPKELI HGTIHCKAGV PEILIEEVYT ENSBTAP00000046266/1-352 GTSLKVKLDN WAQLEKFLAR KKLKLPKELI HGTIHCKAGV PEILIQEVYT ENSTTRP00000014259/1-302 GTSLKVKLDN WAQLEKFLAR KKLRLPKELI HGTIHCKAGV PEILIQEVYT bmy_03965T0/1-290 GTSLKVKLDN WAQLEKFLAR KKLRLPKELI HGTIHCKAGV PEILIQEVYT BACU013313/1-267 GTSLKVKLDN WTQLEKFLAR KKLRLPKELI HGTIHCKAGV PEILIQEVYT 151 200 ENSP00000280191/1-305 LLTHREIKSI QDDFVNFTDY SYQMRLPLVS RSTVSKSIKD NIRLSELLSN ENSBTAP00000046266/1-352 LLTHREIKSI QEDLVNFTDY SYQMQLPLVP RSTASKSIKD NIRLSELIGN ENSTTRP00000014259/1-302 LLTHREIKSI QDDLVNFTDY SYQMQLPLVS RSTASKSIKD NIRLSELIGN bmy_03965T0/1-290 LLTHREIKSI QDDLVNFTDY SYQMQLPLVP RSTASKSIKD NIRLSELIGN BACU013313/1-267 LLTHREIKSI QDDLVNFTDY SYQMQLPLVS RSTASKSIKD NIRLSELISN 201 250 ENSP00000280191/1-305 PNMLTNELKA EFLILLHMLQ RKLGRKLNPE WFDVKPTVGE VTLNHLPAQA ENSBTAP00000046266/1-352 PNKLNNELKV EFLFLLQMLQ RKLSRKLNPK WFAVKPTVGE STLDHRPAKA ENSTTRP00000014259/1-302 PNKLNNERKV EFLLLLQMLQ RKLSRKLNPK WFEVKPTLGE STFSHGPAQA bmy_03965T0/1-290 PNKLNNERKV EFLFLLQMLQ RKLSRKLNPK WFEVKPTVGE STFSHGPAQA BACU013313/1-267 PNKLNNEHKV EFLFLLQMSQ RKLSRKLNP- ---------- ---------- 251 300 ENSP00000280191/1-305 SGRRYNLKVK RGRVVPVLPN I--------- ---------- ---------- ENSBTAP00000046266/1-352 SGNKSNSVVS KERPVPVCCA ASVSTSRAKK QSKQGKPPSQ GAPTFFYMSH ENSTTRP00000014259/1-302 CGCKCNSVVS KERVAPV-SN T--------- ---------- ---------- bmy_03965T0/1-290 SGCKCN---- ---------- ---------- ---------- ---------- BACU013313/1-267 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000280191/1-305 ---------- -----GSGGS SHREIHVKQA GQHSYYSAMK PIRNMDKKP- ENSBTAP00000046266/1-352 PNTDFCLKKK LSRLRGNRVS TPKEIEVKQT RTYS--DCMK PTINVEKEPE ENSTTRP00000014259/1-302 ---------- -----GNGGN PLKEIHMKRA GKHS-SDSMK PIRSMERGPR bmy_03965T0/1-290 ---------- -------GGN XLKEIHVKQA GKHS-FDSMK PIRNMEKEPR BACU013313/1-267 ---------- -----SNGGN PLKEIHVKQA GKHS-FDSVK PIRNMEKEPR 351 400 ENSP00000280191/1-305 ---- ENSBTAP00000046266/1-352 EAPV ENSTTRP00000014259/1-302 ---- bmy_03965T0/1-290 RAPV BACU013313/1-267 RAPV