KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:33 2014 Check: 00 .. Name: ENSTTRP00000007340/1-559 Len: 563 Check: 7508 Weight: 1.00 Name: ENSP00000355121/1-563 Len: 563 Check: 1988 Weight: 1.00 Name: ENSBTAP00000046360/1-555 Len: 563 Check: 5962 Weight: 1.00 Name: bmy_06897T0/1-546 Len: 563 Check: 3993 Weight: 1.00 Name: BACU017720/1-547 Len: 563 Check: 7074 Weight: 1.00 // 1 50 ENSTTRP00000007340/1-559 ITTNSHPPTC LDAEASMAVI SLLFLAVMYV VHHPLMVSDR MDLDTLARSR ENSP00000355121/1-563 MTTDSYSPTS PDAEASMAVI SLLFLAVMYV VHHPLMVSDR MDLDTLARSR ENSBTAP00000046360/1-555 --------TS PDAGASMAVI SLLFLAVMYV VHHPLLVSDR MDLDTLARSR bmy_06897T0/1-546 ---------- ------MAVI SLLFLAVMYV VHHPLMVSDR MDLDTLARSR BACU017720/1-547 ---------- ------MAVI SLLFLAVMYV VHHPLMVSDR MDLDTLARSR 51 100 ENSTTRP00000007340/1-559 QLEKRMSEEM RQLELEFEER KRAAEEQQKA ENFWRGDTSS DQLVPGKKDR ENSP00000355121/1-563 QLEKRMSEEM RLLEMEFEER KRAAEQRQKA ENFWTGDTSS DQLVLGKKDM ENSBTAP00000046360/1-555 QLEKRMSEEM RQLELEFEER KRAAEEKQKA ENFWRGDTSG DQLVLGKKDR bmy_06897T0/1-546 QLEKRMSEEM RQLELEFEER KQAAEEKQKA ENFWRGDTSS DQLVLGKKDR BACU017720/1-547 QLEKRMSEEM RQLELEFEQR KRAAEEKQKA ETFWRGDTSS DQLALGKKDR 101 150 ENSTTRP00000007340/1-559 GRPFQADGHE GPLGWMLGNL WNAGLFCFFL IFELLRQNMQ HEPAFDSSSD ENSP00000355121/1-563 GWPFQADGQE GPLGWMLGNL WNTGLFCLFL VFELLRQNMQ HEPAFDSSSE ENSBTAP00000046360/1-555 GWPFQVDGQE GPLGWMLGNL WNAGLFCIFL IFELLRQNMQ HEPAFDSSSD bmy_06897T0/1-546 GWPFQADGQE GPLGWMLGNL WNAGLFCFFL IFELLRQNMQ HEPAFDSSSD BACU017720/1-547 GWPFQADGQE GPLGWMLGNL WNAGLFCFFL IFELLRQNMQ HEPAFDSSSD 151 200 ENSTTRP00000007340/1-559 -DETEVRVVP VS---YFTDL PPREAXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000355121/1-563 EEEEEVRVVP VTSYNWLTDF PSQEALDSFY KHYVQNAIRD LPCTCEFVES ENSBTAP00000046360/1-555 DDEEEVRVVP ITSYNWLTDF PSREALESFH KHHVQNVTRD LPCTCEFVES bmy_06897T0/1-546 EEEEEVRGVP VTSYNWLTDF PPREVLESFH KH-IQNVTRD LPCTCEFVES BACU017720/1-547 EEEEEVRGVP VTSYNWLTDF PPREVLESFH KHHIQNVTRD LPCTCEFVES 201 250 ENSTTRP00000007340/1-559 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXHET QKFDILVPIV ENSP00000355121/1-563 FVDDLIEACR VLSRQEAHPQ LEDCLGIGAA FEKWGTLHET QKFDILVPIV ENSBTAP00000046360/1-555 FVDDLIEACR VLSRREAHPQ LEDCLGIGAA FEKWGTLHET QKFDILVPII bmy_06897T0/1-546 FVDDLIKACR VLSRREAHPQ LEDCLGIGAA FEKWGTLHET QKFDILVPIV BACU017720/1-547 FVDDLIEACR VLSRREAHPQ LEDCLGIGAA FEKWGTLHET QKFDILVPIV 251 300 ENSTTRP00000007340/1-559 PPQGTMFALE MRDLALGRRC GRVRVESECV CKREKLLGDV LCLVHHHRDH ENSP00000355121/1-563 PPQGTMFVLE MRDPALGRRC GCVLVESECV CKREKLLGDV LCLVHHHRDP ENSBTAP00000046360/1-555 PPQGTMFVLE MRDPALGRRC GCVLVESECV CKREKLLGDV LCLVHHHRDH bmy_06897T0/1-546 PPQGTMFVLE MSDLALGRRC GCVLVESECV CKREKLLGDV LCLVHHHRDH BACU017720/1-547 PPQGTMFVPE MRDLALGRRC GCVLVESECV CKREKLLGDV LCLVHHHRDH 301 350 ENSTTRP00000007340/1-559 SALLGKRNSS IKAALCTGSH LDVCKTVQWF TNMVGNAWAL VAHKYDFKLS ENSP00000355121/1-563 SAVLGKCSSS IKAALCTGFH LDVCKTVQWF RNMMGNAWAL VAHKYDFKLS ENSBTAP00000046360/1-555 SALVGKSNSS IKAALCTGSH LDVYKTVQWF RNMVGNAWAL VAHKYDFKLS bmy_06897T0/1-546 SALLGKCNSS IKAALCTGSY LDVCKTVQWF RNMVGNAWAL VAHKYDFKLS BACU017720/1-547 SALLGECNSS IKAALCTGSY LDVCKTVQWF RNMVGNAWAL VAHKYDFKLS 351 400 ENSTTRP00000007340/1-559 LPPSTTSCKL RLDYRSGRFL SIRLVLGVQQ EDSLVYLVSQ APDQEQLTSV ENSP00000355121/1-563 LPPSTTSCKL RLDYRSGRFL SIHLVLGVQR EDTLVYLVSQ APDQEQLTSV ENSBTAP00000046360/1-555 LPLSTTCCKL RLDYRSGRFL SIRLVLGVQR EDTLVYLVSQ APDQEQVTSV bmy_06897T0/1-546 LPPSTTSCKL RLDYRSGRFL SIRLVLGVQR EDTLVYLVSQ APDQEQFTSV BACU017720/1-547 LPPSTTSCKL RLDYRSGRFL SIRLVLGVQR EDTLVYLVSR APDQEQFTSV 401 450 ENSTTRP00000007340/1-559 DWPESFAACE HLFLKLVGRF APENTCHLKC LQILLSLRDL QSLPQGASHP ENSP00000355121/1-563 DWPESFVACE HLFLKLVGRF APENTCHLKC LQIILSLRQH QSLPHGASRP ENSBTAP00000046360/1-555 DWPESFAACE HLFLKLVGRF APENTCHLKC LQIILSLRDL QSLPQGASRP bmy_06897T0/1-546 DWPESFAACE HLFLKLVGRF APENTCHLKC LQIILSLRDL QSLPQGASRP BACU017720/1-547 DWPESFAACE HLFLKLVGRF APENTCHLKC LQIILSLRDL QSLPQGASHP 451 500 ENSTTRP00000007340/1-559 ILTSYHFKTA LMHLLLQLPL TDWQHGMLSQ RLQDILWFLG QGLQRRSLHH ENSP00000355121/1-563 ILTSYHFKTA LMHLLLRLPL TDWAHNMLSQ RLQDILWFLG RGLQQRSLHH ENSBTAP00000046360/1-555 ILTSYHFKTA LMHLLLRLPL TDWQHDMLSQ RLQDILWFLG RGLQQRSLHH bmy_06897T0/1-546 ILTSYHFKTA LMHLLLQLPL TDWQHGMLSQ RLQDILWFLG RGLQRRSLHH BACU017720/1-547 ILTSYHFKTA LMHLLLQLPL TDWQHGMLSQ RLQDILWFLG RGLQRRSLHH 501 550 ENSTTRP00000007340/1-559 FLIGNTFLPL TIPIPKTFRN AEPVNLFQHL VLNPMAHSQA VEEFHNLLTQ ENSP00000355121/1-563 FLIGNNFLPL TIPIPKTFRN AEPVNLFQHL VLNPKAHSQA VEEFQNLLTQ ENSBTAP00000046360/1-555 FLIGNTFLPL TIPIPKTFRN AEPVNLFQHL VLNPMAHSQA VEEFHNLLAQ bmy_06897T0/1-546 FLIGNTFLPL TIPIPKTFRN AEPVNLFQHL VLNPMAHSQA VEEFHNLLTQ BACU017720/1-547 FLIGNTFLPL TIPIPKTFRN AEPVNLFQHL VLNPMAHSQA VEEFHNLLTQ 551 600 ENSTTRP00000007340/1-559 VKALPCAPLA GAH ENSP00000355121/1-563 VKTLPHAPLA AAP ENSBTAP00000046360/1-555 VKALPCSSLA GAR bmy_06897T0/1-546 VKALPCASLA GAH BACU017720/1-547 VKALPCASLA GAH