KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:35 2014 Check: 00 .. Name: ENSP00000308921/1-402 Len: 404 Check: 8341 Weight: 1.00 Name: ENSBTAP00000046384/1-402 Len: 404 Check: 7111 Weight: 1.00 Name: ENSTTRP00000000249/1-403 Len: 404 Check: 8836 Weight: 1.00 Name: bmy_10744T0/1-403 Len: 404 Check: 7512 Weight: 1.00 Name: BACU007410/1-327 Len: 404 Check: 1718 Weight: 1.00 // 1 50 ENSP00000308921/1-402 MASIIARVGN SRRLNAPLPP WAHSMLRSLG RSLGPIMASM ADRNMKLFSG ENSBTAP00000046384/1-402 MTSIIARMSN SRRQNTSLPP WAHSMLRSLE RSLGPLMAIL AERNLKLFSG ENSTTRP00000000249/1-403 MASIIARVGN SRRQNAPLPP WAHSMLRSLE RSLGPLMANM AERNMKLFSG bmy_10744T0/1-403 MASIIARVGN SRRQNAPLPP WAHSMLRSLE RSLGPLMANM AERNMKLFSG BACU007410/1-327 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000308921/1-402 RVVPAQGEET FENWLTQVNG VLPDWNMSEE EKLKRLMKTL RGPAREVMRV ENSBTAP00000046384/1-402 RVVPAQGEET FENWLIQVNE VLPDWNMSEE EKLRRLIKTL RGPAREVMLL ENSTTRP00000000249/1-403 RVMPAQGEET FENWLTQVNG VLPDWNMSEE EKLKRLMKTL RGPAREVMRL bmy_10744T0/1-403 RVVPAQGEET FENWLTQVNG VLPDWNMSEE EKLKRLMKTL RGPAREVMRL BACU007410/1-327 ---------- ---------- ------MSEE EKLKRLMKTL RGPAREVMRL 101 150 ENSP00000308921/1-402 LQATNPNLSV ADFLRAMKLV FGESESSVTA HGKFFNTLQA QGEKASLYVI ENSBTAP00000046384/1-402 LQAANPNLSV ADFLHAMKLV FGESESSVTA HSKFFNTLQA QGEKASLYVI ENSTTRP00000000249/1-403 LQAANPNLSV ADFLHAMKLV FGESESSVTA HGRFFNTLQA QGEKASLYVI bmy_10744T0/1-403 LQAANPNLSV ADFLHAMKLV FGESESSVTA HGRFFNTLQA QGEKASLYVI BACU007410/1-327 LQAANPNLSV ADFLHAMKLV FGESESSVTA HGRFFNTLQA QGEKASLYVI 151 200 ENSP00000308921/1-402 RLEVQLQNAI QAGIIAEKDA NRTRLQQLLL GGELSRDLRL RLKDFLRMYA ENSBTAP00000046384/1-402 RLEVQLQNAI QAGIIAQKDA NQSRLHQFLL GAELNGDLRF RLKNLLRMYA ENSTTRP00000000249/1-403 RLEVQLQNAI QAGIIAQKDA NQSRLHQLLL GAELNGDLRF RLKNLLRMYA bmy_10744T0/1-403 RLEVQLQNAI QAGIIAQKDA NQSRLHQLLL GAELNGDLRF RLKNLLRMYA BACU007410/1-327 RLEVQLQNAI QAGIIAQKDA NQSRLHQLLL GAELNGDLRF RLKNLLRMYA 201 250 ENSP00000308921/1-402 NEQERLPNFL ELIRMVREEE DWDDAFIKRK RPKRSESMVE RAVSPVAFQG ENSBTAP00000046384/1-402 NEQERLPSFL ELIRMIREEE DWDDIFIKQK RAKRSESVVA RATRPVAFGG ENSTTRP00000000249/1-403 NEQERLPSFL ELIRMIREEE DWDDTFIKRK RAKRSESMVE RATSPVAFGG bmy_10744T0/1-403 NEQERLPSFL ELIRMIREEE DWDDTFIKRK RAKRSESMVE RATSPVAFGG BACU007410/1-327 NEQERLPSFL ELIRMIREEE DWDDTFIKRK RAKRSESMVE RATSPVAFGG 251 300 ENSP00000308921/1-402 SPPIVIGSAD CNVIEIDDTL -DDSDEDVIL V-ESQDPPLP SWGAPPLRDR ENSBTAP00000046384/1-402 SPPIVIDNKD CNVIEIDDTP -DDSDEDVIL VGESQDLPRS FSDSPPSRRR ENSTTRP00000000249/1-403 SRPIVISNAD CSVIEIDDTP DDDSDEDVIL V-ESQDPPLS FSSSPLPRRR bmy_10744T0/1-403 SPPIVIGNAD CNVIEIDDTP DDDSDEDVIL V-ESQDPPLS FSSSPPPRRR BACU007410/1-327 SPPVVIRNAD CNVIEIDDTP DDDSDEDVIL V-ESQDPPLS FSSSPPPRRR 301 350 ENSP00000308921/1-402 ARPQDEVLVI DSPHNSRAQF PSTSGGSGYK NNGPGEMRRA RKRKHTIRCS ENSBTAP00000046384/1-402 ARPQDQVLII DSPNNSQFPS PCTSGGSGYK NDGPGNMRRT RKRKHTIRCS ENSTTRP00000000249/1-403 ARPRNQVLVI DSPSNSRAQS PCTSGGSGYK NDGPGDVRRT RKRKNTIHCS bmy_10744T0/1-403 ARPRNRVLVI DSPNNSRAQS PCTSGGSGYK NDGPGDMRRT RKRKYTIRCS BACU007410/1-327 ARPRNQVLVV DSPNNSRAQS PCTSGGSGYK NDGPGDMRRT RKRKYTIRCS 351 400 ENSP00000308921/1-402 YCGEEGHSKE TCDNESDKAQ VFENLIITLQ ELTHTEMERS RVAPGEYNDF ENSBTAP00000046384/1-402 YCGEEGHSKE TCDNESNKAQ MFENLIITLQ ELAHTE-ERS REAPVEPSDP ENSTTRP00000000249/1-403 YCGQEGHSKE TCDNESNKAQ MFENLIITLQ ELTHTEEEGS REAPGQPSDP bmy_10744T0/1-403 YCGEEGHSKE TCDNESNKAQ MFENLIITLQ ELTHTEEEGS REAPGEPSDP BACU007410/1-327 YCGEEGHSKE TCDNESNKAQ MFENLIITLQ ELTHTEEEGS REAPGEPSDP 401 450 ENSP00000308921/1-402 SEPL ENSBTAP00000046384/1-402 CELQ ENSTTRP00000000249/1-403 SEPQ bmy_10744T0/1-403 SEPQ BACU007410/1-327 SEPQ