KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:36 2014 Check: 00 .. Name: ENSP00000341282/1-351 Len: 351 Check: 8434 Weight: 1.00 Name: ENSTTRP00000015028/1-348 Len: 351 Check: 5888 Weight: 1.00 Name: ENSBTAP00000046422/1-323 Len: 351 Check: 973 Weight: 1.00 Name: bmy_20720T0/1-193 Len: 351 Check: 6981 Weight: 1.00 Name: BACU004807/1-96 Len: 351 Check: 7578 Weight: 1.00 // 1 50 ENSP00000341282/1-351 MAGRSLTSKA EPTAGAVDRA EKAGGQDTSS QKIEDLMEMV QKLQKVGSLE ENSTTRP00000015028/1-348 MAGRSELSSA K-QAGAVGRA DEAGGQAKSS QKIEDLMEMV KQLQKVGSLE ENSBTAP00000046422/1-323 MAGRPGSSNA E-AAGAVGPT DEARGQAESS QKIEDLMEMV KKLQKVGSLE bmy_20720T0/1-193 MAGRSGSSNA E-QAGAVGRA DEAGGQAKSS QKIEDLMEM- ---------- BACU004807/1-96 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000341282/1-351 PRVEVLINRI NEVQQAKKKA NKDLGEARTI CEALQKELDS LHGEKVHLKE ENSTTRP00000015028/1-348 PRIEVLINRI NEVQQAKKKA SEELGEARTV WETLQKELDS LSGEKVRLKE ENSBTAP00000046422/1-323 PRVEVLINRI NEVQQAKKKA SEELGDARTV WETLQKELDS LSGEKVRLKE bmy_20720T0/1-193 ---------- ---------- ---------- ---------- ---------- BACU004807/1-96 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000341282/1-351 ILSKKQETLR ILRLHCQEKE SEAHRKHTML QECKERISAL NLQIEEEKNK ENSTTRP00000015028/1-348 ILSKKQETLR ILRLHCQEKE SEAQRKHTML QECKERISAL NSQMGQEKNK ENSBTAP00000046422/1-323 ILSKKQETLR VLRLHCQDKE NEAQRKQTML QECKERISAL NSQIEQEKNK bmy_20720T0/1-193 ---------- ---------- ---------- ---------- ---------- BACU004807/1-96 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000341282/1-351 QRQLRLAFEE QLEDLMGQHK DLWDFHMPER LAKEICALDS SKEQLLKEEK ENSTTRP00000015028/1-348 QRQLRLDFEE QLEDLMGQHK GLWEFHKPEQ LALEIAALDS SKEKLLKEEK ENSBTAP00000046422/1-323 QRQLRLDFEE QLEDLMGQYK DLWEFHKPER LALEISTLDS GKEQLLKEEK bmy_20720T0/1-193 ---------- ---------- ------KPEQ LALEIGALDS SKEQLLKEEK BACU004807/1-96 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000341282/1-351 LVKATLEDVK HQLCSLCGAE GPSTLDEGLF LRSQEAAATV QLFQEEHRKA ENSTTRP00000015028/1-348 LVEAKLEDVK HRLCSQFGAK GCSAITEGLF LRSQEAAAVV HLFEEENKKA ENSBTAP00000046422/1-323 LVEAKLEDVK HRLCSQFGAK G-HTINEGLF LRSPEAAAVV HLFEEENRKA bmy_20720T0/1-193 LVEAKLEDVK HRLCSQFGAK GCSAITEGLF LRSEEAAAVV HLFEEENEKA BACU004807/1-96 ---------- ---------- ---------- -----MPTLR HLFEEENEKA 251 300 ENSP00000341282/1-351 EELLAAAAQR HQQLQQKCQQ QQQKRQRLKE ELEKHGMQVP AQAQSTQEEE ENSTTRP00000015028/1-348 GEFLEAAAQR QEQLQQKCRQ LQQQRQRLKE ELEKLGVQVP AQGQSNQEEG ENSBTAP00000046422/1-323 QELLEAAAQR QEQLQQKCQQ LQQKRQRLKE ELEKLGVQVL AQAQSKQEEE bmy_20720T0/1-193 QEFLEAAARR QEQLQQKCQQ LQQKRQRLKE ELEKLGVQVP AQGQSKQEEG BACU004807/1-96 QEFLEAAAQR QEQLQQKCQQ LQQKRQRLKE ELEKLGVQVP AQGQSKQEEG 301 350 ENSP00000341282/1-351 AGPGDVASPK PLKGERPGAA HQAGPDVLIG QEDTLHPDLS PRGFQEIKEL ENSTTRP00000015028/1-348 AGPGEAANPK PL-GERPRAA H-AEPDALLG KEEPPCLELS PGSFQEIKAP ENSBTAP00000046422/1-323 AGLGEAANPK PL-----GVS EEKDQ----- -EPSTK---- ---------- bmy_20720T0/1-193 AGPGEAANPK PL-----RVS EEKDP----- -EPPTKQSLM PS-------- BACU004807/1-96 AGPGEAANPK PL-----GVS EEKDP----- -EPPTKQSLM PF-------- 351 400 ENSP00000341282/1-351 F ENSTTRP00000015028/1-348 Y ENSBTAP00000046422/1-323 - bmy_20720T0/1-193 - BACU004807/1-96 -