KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:37 2014 Check: 00 .. Name: ENSP00000298050/1-604 Len: 614 Check: 9449 Weight: 1.00 Name: ENSBTAP00000046462/1-606 Len: 614 Check: 9271 Weight: 1.00 Name: ENSTTRP00000004326/1-594 Len: 614 Check: 1148 Weight: 1.00 Name: bmy_20557T0/1-390 Len: 614 Check: 8056 Weight: 1.00 Name: BACU001963/1-595 Len: 614 Check: 2479 Weight: 1.00 // 1 50 ENSP00000298050/1-604 MENQAHNT-- -----MGTSP CEAELQELME QIDIMVSNKK MDWERKMRAL ENSBTAP00000046462/1-606 LLELAHSI-- -----ARASP CEAELQELME QIDIMVNNKK LDWERKMRAL ENSTTRP00000004326/1-594 ---------- -----VEVSP CEAELQELME QIDIMVNNKK LDWERKMRAL bmy_20557T0/1-390 ---------- ---------- ---------- ---------- ------MRAL BACU001963/1-595 MWDQTLSTFL SKEWRARASP CEAELQELME QIDIMVNNKK LDWERKMRAL 51 100 ENSP00000298050/1-604 ETRLDLRDQE LANAQTCLDQ KGQEVGLLRQ KLDSLEKCNL AMTQNYEGQL ENSBTAP00000046462/1-606 ETRLDLRDQE LANAQTCLEQ KGQEVGLLRQ KLDSLEKCNL AMTQNYEGQL ENSTTRP00000004326/1-594 ETRLDLRDQE LASAQTCLEQ KGQEVGLLRQ KLDSLEKCNL AMTQNYEGQL bmy_20557T0/1-390 ETRLDLRDQE LANAQTCLEQ KGQEVGLLRQ KLDSLEKCNL AMTQNYEGQL BACU001963/1-595 ETRLDLRDQE LANAQTCLEQ KGQEVGLLRQ KLDSLEKCNL AMTQNYEGQL 101 150 ENSP00000298050/1-604 QSLKAQFSKL TNNFEKLRLH QMKQNKVPRK ELPHLKEEIP FELSNLNQKL ENSBTAP00000046462/1-606 QTLKAQFSKL TNSFEKLRLH QLKQNKFRRK EVPHLKEEMP FELNSLNQKL ENSTTRP00000004326/1-594 QTLKAQFSKL TNSF-KLRLH QMKQNNFRQX XXXXXXXXXX XXXXXXXXXX bmy_20557T0/1-390 QTLKAQFSKL TNSFEKLRLH QMKQNKFRQK EVPHVKEEIP FEMSNLNQKL BACU001963/1-595 QTLKAQFSKL TNSFEKLRLH QMKQNKFRQK EVPHVKEEIP FELSNLNQKL 151 200 ENSP00000298050/1-604 EEFRAKSREW DKQEILYQTH LISLDAQQKL LSEKCNQFQK QAQSYQTQLN ENSBTAP00000046462/1-606 EEFRAKSREW DKQEILYQTH LVSLDAQQKI LSEKCNQFQK QAQSYHTQLN ENSTTRP00000004326/1-594 XEFRAKSREW DKQEILYQTH LVSLDAQQKV LSEKCNPFQK QAQSYQTPLN bmy_20557T0/1-390 EEFRAKSREW DKQEILYQTH LVSLDAQQKV LSEKCNQFQK QAQNYQTPLN BACU001963/1-595 EEFRAKSREW DKQEILYQTH LVSLDAQQKV LSEKCSQFQK QAQSYQTPLN 201 250 ENSP00000298050/1-604 GKKQCL-EDS SSEIPRLICD PDPNCEINER DEFIIEKLKS AVNEIALSRN ENSBTAP00000046462/1-606 GKKQSI-EDS SPEIPRLVCE PDSTCETSER DEFIIEKLKS AVSEIALSRN ENSTTRP00000004326/1-594 SKKQDIEEDS SSEIPWI-CE PDTSCETNER DEFIIEKLKS AVSEIALSRN bmy_20557T0/1-390 SKKQGI-EDS SSEIPWI-CE PDTSCETSER DEFIIEKLKS AVSEIALSRN BACU001963/1-595 SKKQGI-EDS SSEIPWI-CE PDTSCETNER DEFIIEKLKS AVSEIALSRN 251 300 ENSP00000298050/1-604 KLQDENQKLL QELKMYQRQC QAMEAGLSEV KSELQSRDDL LRIIEMERLQ ENSBTAP00000046462/1-606 KLQDENQKLL QELKMYQRQC QAMEAGLSEV KSELQSRDDL LRIIEMERLQ ENSTTRP00000004326/1-594 KLQDENQKLL QELKMYQRQC QAMAAGLSEV KSELQSRDDL LRIIEMERLQ bmy_20557T0/1-390 KLQDENQKLL QELKMYQRQC QAMEAGLSEV KSELQSRDDL LRIIEMERLQ BACU001963/1-595 KLQDENQKLL QELKMYQRQC QAMEAGLSEV KSELQSRDDL LRIIEMERLQ 301 350 ENSP00000298050/1-604 LHRELLKIGE CQNAQGNKTR LESSYLPSIK EPERKIKELF SVMQDQPNHE ENSBTAP00000046462/1-606 LHRELLKLGE SQSTQENKKR LELSYSSSIK ETEKKRKELF SVTPDQPDHE ENSTTRP00000004326/1-594 LYRELLKLGE CQSAPENKKR LESSYSPSIK ESEKQWKELF AVTPDQPNHE bmy_20557T0/1-390 LHRELLKVGE CQSAPENKKR LESSYSPCIK ESEKQRKELF AVTPDQPNHE BACU001963/1-595 LHRELLKLGE CQSAPENKKR LESSYSPSIK ESEKQRKELF AVTPDQPNHE 351 400 ENSP00000298050/1-604 KELNKIRSQL QQVEEYHNSE QERMRNEISD LTEELHQKEI TIATVTKKAA ENSBTAP00000046462/1-606 KELNKIRSHL YQEEEYHSSE QERMRNEISD LTQELHQKEI TIATVMKKAA ENSTTRP00000004326/1-594 KELNKIRSQL YQEEEYHSSE QERMRNEISD LTEELHQKEI TIATIMKKAA bmy_20557T0/1-390 KELNKIRSQL YQEEEYHSSE QERMRNEISD LTEELHQKEI TIATIMKKAA BACU001963/1-595 KELNKIRSQL YQEEEYHSSE QERMRNEISD LTEALHQKEI TIATIMKKAA 401 450 ENSP00000298050/1-604 LLEKQLKMEL EIKEKMLAKQ KVSDMKYKAV RTENTHLKGM MGDLDPGEYM ENSBTAP00000046462/1-606 LLERQLKMEL EIKEKMLSKQ QMLDTRYKAV RTENTHLKGM MGDLDPGRYM ENSTTRP00000004326/1-594 FLERQLKMEL EIKEKMLAKQ QVSDKRDKAV RTEITHLKGM MGDLDPGRYM bmy_20557T0/1-390 FLERZLKMEL EIKEKMLAKQ QVCKRQEAPV QVTLAQCK-- ---------- BACU001963/1-595 LLERQLKMEL EIKEKMLAKQ QVSDMRYKAV RTENIHLKGM MGDLNPGRYM 451 500 ENSP00000298050/1-604 SMDFTNREQS RHTSINKLQY ENERLRNDLA KLHVNGKSTW TNQNTYEETG ENSBTAP00000046462/1-606 SVDFTNREHS RHTSINKLEY ENERLRNDLA KLHASGKSTW ANVNTYEEAG ENSTTRP00000004326/1-594 SMDFTNREHA RHTSISKLEY ENERLRNDLA KLHAIGKSAW ANQNTYKETG bmy_20557T0/1-390 ---------- ---------- ---------- ---------- ---------- BACU001963/1-595 SMNFTNRENA RHTSINKLEY ENERLRNDLA KLHASGKSAW ANQNTYEETG 501 550 ENSP00000298050/1-604 RYAYQSQIKV EQNEE--RLS HDCEPNRSTM PPLPPSTFQA KEMTSPLVSD ENSBTAP00000046462/1-606 RYAYQSQIKM GNNLESLRFN HDREPNRSAT PPLPSSPFQT KEITSPLVSD ENSTTRP00000004326/1-594 RYAYQSQKNK GKNED---FS HDREPNRSAT PSLPLSPFQT KEMTSPLVSD bmy_20557T0/1-390 ---------- ---------- ---------- ---------- ---------- BACU001963/1-595 R--------- --------FS HDREPNKSAT PSLPPLPFET KEMTSPLVSD 551 600 ENSP00000298050/1-604 DDVFPLSPPD MSFPASLAAQ HFLLEEEKRA KELEKLLNTH IDELQRHTEF ENSBTAP00000046462/1-606 EEVFPMSPPD ISFPASLATQ HFLLEEEKRA KELEKLLNTH IDELQRHTEF ENSTTRP00000004326/1-594 DEVFPMSPPD TAFPASLAAQ HFFLEEEKRA KELEKLLNTH IDELQRHTEF bmy_20557T0/1-390 ---------- ---------- ---------- ---------- ---------- BACU001963/1-595 DEVFPMSPPD IAFPASLAAQ HFLLEEEKRA KELEKLLNTH IDELQRHTEF 601 650 ENSP00000298050/1-604 TLNKYSKLKQ NRHI ENSBTAP00000046462/1-606 TLNKYTKLKQ DRHI ENSTTRP00000004326/1-594 TLNKHTKLKQ NRHI bmy_20557T0/1-390 ---------- ---- BACU001963/1-595 TLNKYTKLKQ NRHI