KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:37 2014 Check: 00 .. Name: BACU016489/1-306 Len: 429 Check: 1092 Weight: 1.00 Name: bmy_02369T0/1-323 Len: 429 Check: 2120 Weight: 1.00 Name: ENSBTAP00000046479/1-423 Len: 429 Check: 5650 Weight: 1.00 Name: ENSTTRP00000011469/1-419 Len: 429 Check: 7997 Weight: 1.00 Name: ENSP00000347443/1-418 Len: 429 Check: 689 Weight: 1.00 // 1 50 BACU016489/1-306 MAMASPAIGQ RPYRLLLDPE PPRYLQSLSG PK--PPPPPP PPPGRSSRRC bmy_02369T0/1-323 ---MLPTQGA K--ELLLTDL P--------- ---------- ---------- ENSBTAP00000046479/1-423 MAMASPAIGQ RPYRLLLEPE PPHYLQSLSD PEPLPPPPPP PPPGHSSRRC ENSTTRP00000011469/1-419 MAMASPAIGQ RPYRLLLDPE PPRYLQSLSG PK----PPPP PPPGRPSRRC ENSP00000347443/1-418 MAMASPAIGQ RPYPLLLDPE PPRYLQSLSG PE-----LPP PPPDRSSRLC 51 100 BACU016489/1-306 APAPLSTAPG AHEGRGARRA ARGDLEPQPR ASRPARALRP GLQQRLRRRP bmy_02369T0/1-323 ---------- --------RA KKEEM----- ---WQRLMVT GFR------- ENSBTAP00000046479/1-423 APAPLSTAPG AHERRSAWRA ARGDPEPQPR ASRPARPLRP GLQQRLRRRP ENSTTRP00000011469/1-419 APAPLSTAPG AHEGRCARRA ARGDLEPQPR ASRPARPLRP GLQQRLRRRP ENSP00000347443/1-418 VPAPLSTAPG AREGRSARRA ARGNLEPPPR ASRPARPLRP GLQQRLRRRP 101 150 BACU016489/1-306 GAPRPRDVRS IFEQPQDPRV PAERGEGHCF TELELRSGWG WCDLCGREVL bmy_02369T0/1-323 ---------- ---------- -----DSFCF VFLK------ -CKV------ ENSBTAP00000046479/1-423 GAPRPRDVRS IFEQPQDPRV PAERGEGHCF VELALRGGRG WCDLCGREVW ENSTTRP00000011469/1-419 GAPRPRDVRS IFEQPQDPRV PAERGEGHCF AELELRSGWG WCDLCGREVL ENSP00000347443/1-418 GAPRPRDVRS IFEQPQDPRV PAERGEGHCF AELVLPGGPG WCDLCGREVL 151 200 BACU016489/1-306 RQALRCANCK FTCHPE---- -CRSLIQLDC SQQGGPSRDR PSPESTLTST bmy_02369T0/1-323 WTYLSLANVG SGGRVEKASG WCEVLLDLTA V-HAGLWAEY HLGWSTLSLP ENSBTAP00000046479/1-423 WRALSCANCK FTCHPE---- -CRSLIQLDC TQQDGANRDR PSPESTLAVT ENSTTRP00000011469/1-419 RRALRCANCK FTCHPE---- -CRSLIQLDC SQQEGPSRDR PSPESTLTST ENSP00000347443/1-418 RQALRCTNCK FTCHPE---- -CRSLIQLDC SQQEGLSRDR PSPESTLTVT 201 250 BACU016489/1-306 F-SQSVFVSI DEHTSTAGLA NV-------- ---------- ---------- bmy_02369T0/1-323 PKQQNDCKPA EEPRSPPTLQ EIKQKIDSYN TREKNCLGMK LSEDGTYTGF ENSBTAP00000046479/1-423 F-SQNDCKPP EEPQRPPTLQ EIKQKIESYN AREKNCLGMK LSEDGSYTGF ENSTTRP00000011469/1-419 F-SQNDCKPA EEPWCPPTLQ EIKQKIDSYN TREKNCLGMK LSEDGTYTGF ENSP00000347443/1-418 F-SQNVCKPV EETQRPPTLQ EIKQKIDSYN TREKNCLGMK LSEDGTYTGF 251 300 BACU016489/1-306 LEVDLSLVKN -AVSFGVLP- ---------- IGVCLQDRTS L-----AVQW bmy_02369T0/1-323 IKVHLKLRRP VTVPAGIRPP SIYDAIKEVD LAATTDKRTS FYLPLDAIKQ ENSBTAP00000046479/1-423 IKVHLKLRRP VTVPAGIRPQ SIYDAIKDVD PAAATDKRTS FYLPLDAVKQ ENSTTRP00000011469/1-419 IKVHLRLRRP VMVPAGIRPP SIYDAIKEVD LAATTDRRTS FYLPLDAIKQ ENSP00000347443/1-418 IKVHLKLRRP VTVPAGIRPQ SIYDAIKEVN LAATTDKRTS FYLPLDAIKQ 301 350 BACU016489/1-306 LRLHAANAGG A--------- ---------- --------GS IPGQRSET-- bmy_02369T0/1-323 LHISSTTTVS EVIQGLLKKF MVVDNPQKFA LFKRIHKDGQ VLFQKLSVAD ENSBTAP00000046479/1-423 LHISSSTTVS EVIQGLLKKF MVVDNPQKFA LFKRIHKDGQ VLFQKLSIAD ENSTTRP00000011469/1-419 LHICSTTTVS EVIQGLLKKF MVVDSPQKFA LFKRIHKDGQ VLFQKLSVAD ENSP00000347443/1-418 LHISSTTTVS EVIQGLLKKF MVVDNPQKFA LFKRIHKDGQ VLFQKLSIAD 351 400 BACU016489/1-306 ---------- PHAELCSQKV KKKKKG---- ---------- ---------- bmy_02369T0/1-323 CPLYLRLLAG PDTDVLSFVL KENETGEVEW DAFSIPELQN FLTILEKEEQ ENSBTAP00000046479/1-423 CPLYLRLLAG PDTDVLSFVL KENETGEVEW DAFSIPELQN FLTILEKEEQ ENSTTRP00000011469/1-419 CPLYLRLLAG PDTDVLSFVL KENETGEVEW DAFSIPELQN FLTILEKEEQ ENSP00000347443/1-418 RPLYLRLLAG PDTEVLSFVL KENETGEVEW DAFSIPELQN FLTILEKEEQ 401 450 BACU016489/1-306 ---QEIN--L DQLRSSWRNA PSVNRIK-- bmy_02369T0/1-323 DKIQQVQKKY DKFRQKLEEA LRESQGKPA ENSBTAP00000046479/1-423 DKVQQVQKKY NKFRQKLEEA LRKAQGKPA ENSTTRP00000011469/1-419 DKIQQVQKKY DKFRQKLEEA LRESQGKPA ENSP00000347443/1-418 DKIQQVQKKY DKFRQKLEEA LRESQGKPG