KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:37 2014 Check: 00 .. Name: ENSP00000436262/1-612 Len: 612 Check: 1452 Weight: 1.00 Name: ENSBTAP00000046503/1-609 Len: 612 Check: 708 Weight: 1.00 Name: ENSTTRP00000003165/1-588 Len: 612 Check: 4623 Weight: 1.00 Name: bmy_21318T0/1-607 Len: 612 Check: 6891 Weight: 1.00 Name: BACU018746/1-593 Len: 612 Check: 1874 Weight: 1.00 // 1 50 ENSP00000436262/1-612 MELAMDNSYA FNQRSTCNGI PSEKKNNFLV SEDHGQKILS VLQNFREQNV ENSBTAP00000046503/1-609 IEVAMDNSYN FNQKGSCNGI PSEKKNNFLV SEDHGQKILS ILQNFREQNI ENSTTRP00000003165/1-588 MEVAMDNSYD FNQQGSCNGI PSEKKNNFLV SEDHGQKILS ILQNFREQNV bmy_21318T0/1-607 ----MDNSYD FNQQGSCNGI PSEKKNNFLV SEDHGQKILS ILQNFREQNV BACU018746/1-593 VEVAMDNSYD FNQQGSCNGI PSEKKNNFLV SEDHGQKILS ILQNFREQNV 51 100 ENSP00000436262/1-612 FYDFKIIMKD EIIPCHRCVL AACSDFFRAM FEVNMKERDD GSVTITNLSS ENSBTAP00000046503/1-609 FYDFKIIMKD ETIPCHRCVL AACSDFFRAM FEVNMKERDG GSVTITNLSS ENSTTRP00000003165/1-588 FYDFKIIVKD EIIPCHRCVL AACSDFFRAM FEVNMKERDG GSVTITNLSS bmy_21318T0/1-607 FYDFKIIMKD EIIPCHRCVL AACSDFFRAM FEVNMKERDG GSVTITNLSS BACU018746/1-593 FYDFKIIMKD EIIPCHRCVL AACSDFFRAM FEVNMKERDG GSVTITNLSS 101 150 ENSP00000436262/1-612 KAVKAFLDYA YTGKTKITDD NVEMFFQLSS FLQVSFLSKA CSDFLIKSIN ENSBTAP00000046503/1-609 KAVKAFLDYA YTGKTKITDD NVEMFFQLSS FLQVSFLSKA CSDFLIKSIN ENSTTRP00000003165/1-588 KAVKAFLDYA YTGKTKITDD NVEMFFQLSS FLQVSFLSKA CSDFLIKSIN bmy_21318T0/1-607 KAVKAFLDYA YTGKTKITDD NVEMFFQLSS FLQVSFLSKA CSDFLIKSIN BACU018746/1-593 KAVKAFLDYA YTGKTKITDD NVEMFFQLSS FLQVSFLSKA CSDFLIKSIN 151 200 ENSP00000436262/1-612 LVNCLQLLSI SDSYGSTSLF DHALHFVQHH FSLLFKSSDF LEMNFGVLQK ENSBTAP00000046503/1-609 LVNCLQLLSI SDSYGSARLF DHALYFVQHH FSLLFKSSDF LEMNFGVLQK ENSTTRP00000003165/1-588 LVNCLQLLSI SDSYGSARLF DHALYFVQHH FSLLFKSSDF LEMNFGVLQK bmy_21318T0/1-607 LVNCLQLLSI SDSYGSARLF DHALYFVQHH FSLLFKSSDF LEMNFGVLQK BACU018746/1-593 LVNCLQLLSI SDSYGSARLF DHALYFVQHH FSLLFKSSDF LEMNFGVLQK 201 250 ENSP00000436262/1-612 CLESDELNVP EEEMVLKVVL SWTKHNLESR QKYLPHLIEK VRLHQLSEET ENSBTAP00000046503/1-609 CLESDELNVP EEETVLKVVL SWTKHNLESR QKHLPYLIKK VRLCQLSEET ENSTTRP00000003165/1-588 CLESDELNVP EEETVLKVVL SWTKHNLESR QKHLPYLIKK VRLYQLSEET bmy_21318T0/1-607 CLESDELNVP EEETVLKVVL SWTKHNLESR QKHLPYLIKK VRLYQLSEET BACU018746/1-593 CLESDELNVP EEETVLKVVL SWTKHNLESR QKHLPYLIKK VRLYQLSEET 251 300 ENSP00000436262/1-612 LQDCLFNEES LLKSTNCFDI IMDAIKCVQG SGGLFPDARP STTEKYIFIH ENSBTAP00000046503/1-609 LQDCLLNEEC LLKSTNCFDI IMDAIKCVQG SGGLFPDARP STTEKYIFVH ENSTTRP00000003165/1-588 LQDCLLNEEC LLKSTNCFDI IIDAIKCVQG SGGLFPDARP STTEKYIFVH bmy_21318T0/1-607 LQGCLLNEEC LLKSTNCFDI IIDAIKCVQG SGGLFPDARP STTEKYIFVH BACU018746/1-593 LQGCLLNEEC LLKSTNCFDI IIDAIKCVQG SGGLFPDARP STTEKYIFVH 301 350 ENSP00000436262/1-612 KTEENGENQY TFCYNIKSDS WKILPQSHLI DLPGSSLSSY GEKIFLTGGC ENSBTAP00000046503/1-609 KTEENGEAQY TFCYNIKSDS WKILPQSHLI DLPGSSLSSY GEKIFLTGGC ENSTTRP00000003165/1-588 KTEENGEDQY TFCYNIKSDS WKILPQSHLI DLPGSSLSSY GEKIFLTGGC bmy_21318T0/1-607 KTEENGEDQY TFCYNIKSDS WKILPQSHLI DLPGSSLSSY GEKIFLTGGC BACU018746/1-593 KTEENGEDQY TFCYNIKSDS WKILPQSHLI DLPGSSLSSY GEKIFLTGGC 351 400 ENSP00000436262/1-612 KGKCCRTVRL HIAESYHDAT DQTWCYCPVK NDFFLVSTMK TPRTMHTSVM ENSBTAP00000046503/1-609 KGPCCRTVRL HIAESYHDAT DQTWCYCPVK NDFFLVSTMK TPRTMHTSVM ENSTTRP00000003165/1-588 KGPCCRTVRL HIAESYHDAT DQTWCYCPVK NDFFLVSTMK TPRTMHTSVM bmy_21318T0/1-607 KGPCCRTVRL HIAESYHDAT DQTWCYCPVK NDFFLVSTMK TPRTMHTSVM BACU018746/1-593 KGPCCRTVRL HIAESYHDAT DQTWCYCPVK NDFFLVSTMK TPRTMHTSVM 401 450 ENSP00000436262/1-612 ALDRLFVIGG KTRGSRDIKS LLDVESYNPL SKEWISVSPL PRGIYYPEAS ENSBTAP00000046503/1-609 ALNKLFVIGG KTRGSQDIKS LLDVESYNPL SKEWVSVSPL PRGIYYPEAS ENSTTRP00000003165/1-588 ALNRLFVIGG KTRGSQDIRS LLDVESYNPL SKEWISVSPL PRGIYYPEAS bmy_21318T0/1-607 ALNRLFVIGG KTRGSQDIRS LLDVESYNPL SKEWISVSPL PRGIYYPEAS BACU018746/1-593 ALNRLFVIGG KTRGSQDIRS LLDVESYNPL SKEWISVSPL PRGIYYPEAS 451 500 ENSP00000436262/1-612 TCQNVIYVLG SEVEITDAFN PSLDCFFKYN ATTDQWSELV AEFGQFFHAT ENSBTAP00000046503/1-609 ACQNVIYVLG SEVEITDAFN PSLDCFFNYN ATTDQWSELV AEFGQFFHAT ENSTTRP00000003165/1-588 ACQNVIYVLG SEVEITDAFN PSLDCFFKYN ATTDQWSELV AEFGQFFHAT bmy_21318T0/1-607 ACQNVIYVLG SEVEITDAFN PSLDCFFKYN ATTDQWSELV AEFGQFFHAT BACU018746/1-593 ACQNVIYVLG SEVEITDAFN PSLDCFFKYN ATTDQWSELV AEFGQFFHAT 501 550 ENSP00000436262/1-612 LIKAVPVNCT LYICDLSTYK VYSFCPDTCV WKGEGSFECA GFNAGAIGIE ENSBTAP00000046503/1-609 LIKAVPVNCT LYICDLSTYK VYSFCPDTCV WKGEGSFECA GFNAGAVGIE ENSTTRP00000003165/1-588 LIKAVPVNCT LYICDLSTYK VYSFCPDTCV WKGEGSFECA GFNAGAVGIE bmy_21318T0/1-607 LIKAVPVNCT LYICDLSTYK VYSFCPDTCV WKGEGSFECA GFNAGAVGIE BACU018746/1-593 LIKAVPVNCT LYICDLSTYK VYSFCPDTCV WKGEGSFECA GFNAGAVGIE 551 600 ENSP00000436262/1-612 DKIYILGGDY APDEITDEVQ VYHSNRSEWE EVSPMPRALT EFYCQVIQFN ENSBTAP00000046503/1-609 DKIYILGGDY APDEITDEVQ VYHSSRSEWE EVSPMPRALT EFYCQVIQFN ENSTTRP00000003165/1-588 DKIYILG-DY APDEITDVVH ----SSSEWE EVSPMPRALT EFY------- bmy_21318T0/1-607 DKIYILGGDY APDEITDEVQ VYHSSRSEWE EVSPMPRALT EFYCQVIQFN BACU018746/1-593 DKIYILGGDY APDEITDEVQ VYHSSRSEWE EVSPMPRALT EFY------- 601 650 ENSP00000436262/1-612 KYRDPWFSNL CA ENSBTAP00000046503/1-609 KYRDPWFSN- -- ENSTTRP00000003165/1-588 ---------- -- bmy_21318T0/1-607 KYRDPWFSSH F- BACU018746/1-593 ---------- --