KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:57:38 2014 Check: 00 .. Name: ENSP00000381630/1-235 Len: 293 Check: 8705 Weight: 1.00 Name: bmy_07568T0/1-176 Len: 293 Check: 6579 Weight: 1.00 Name: ENSTTRP00000010831/1-236 Len: 293 Check: 6618 Weight: 1.00 Name: ENSBTAP00000046511/1-209 Len: 293 Check: 6755 Weight: 1.00 // 1 50 ENSP00000381630/1-235 ---------- ---------- ---------- ---------- ---------- bmy_07568T0/1-176 MEKGRPCSAT GLVVGHLPTD SSPAQAWDVP LPHPAVSSGQ WQQTNRTADG ENSTTRP00000010831/1-236 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000046511/1-209 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000381630/1-235 -----MPKGR AGSLPTTSIG WRFQLWFLGL TCPERHLARR LKNNSFYPFV bmy_07568T0/1-176 LYPTQAPKGR LSGLPATSGS KPFQLWAQGL FCTERNLAKR LKNNSFYPFT ENSTTRP00000010831/1-236 -----APKGR FSGLPTTAGS KPFQLWAQGL FCTERNLAKR LKNNSFYPFT ENSBTAP00000046511/1-209 -----APKGR FSGLPTTSSG KPFQLWAQGL FCTERSLARR LKNNSFYPFM 101 150 ENSP00000381630/1-235 QQEPNVFVLE YYLDTLWKGM LLFIISVVLV SFSSLREVQK QETWVFLVYG bmy_07568T0/1-176 QQQPN----- ---------- ---------- ---------- -------AYG ENSTTRP00000010831/1-236 QQQPNVFVLE YYLDTLWKGT LLFIVCFFLV SFGLVSEVQK QKTWGFPAYG ENSBTAP00000046511/1-209 QQQPNVFVLE YYLDTLWKGT LLFIVCILLI SFGLVSEVQK QETWGFPAYG 151 200 ENSP00000381630/1-235 VGVGLWLVIS SLPRRRLVLN HTRGVYHFSI QGRTVCQGPL HLVYVRLALS bmy_07568T0/1-176 VGVGLWLMIS SLPRRRLVLN HVRGVYHFSI QGRTVCQGPM HLVYVRMALS ENSTTRP00000010831/1-236 VGVGLWLMIS SLPRRRLVLN HVRGVYHFSI QGRTVCQAPM HLVYVRMALS ENSBTAP00000046511/1-209 VGVGLWLMIS SLPRRRLVLN HARGVYHFSI QGRTVCQGPM HLVYVRLALN 201 250 ENSP00000381630/1-235 SDAHGRCFFH LVLGGHRLEP LVLVQLSEHY EQMEYLGRYI ARKLNINYFD bmy_07568T0/1-176 SD-------- ----GSRFQ- ---------- -----LPRGL ASLLRL---- ENSTTRP00000010831/1-236 SDAYGRCFFQ LVLCGHKLEP LVLVQLSERY EQMEYLGRHI ARKLNINYFD ENSBTAP00000046511/1-209 SDAYRRCFFQ LVLCGHKLEP LVLVQLSERY EQMEYLGRYI ARKLNINYFD 251 300 ENSP00000381630/1-235 YLATSYRHVV RHWPPPGA-- -GTVMGKSPM GHKPSSSQSS LEV bmy_07568T0/1-176 ---------- ---------- ---------- ---------- --- ENSTTRP00000010831/1-236 CLATSYRHVV RHWPPGATFS PGILLHQNPR KRNSHKSAQD L-- ENSBTAP00000046511/1-209 CLATSYRHVV RHWP------ ---------- ---------- ---