KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:38 2014 Check: 00 .. Name: ENSTTRP00000005540/1-241 Len: 242 Check: 9750 Weight: 1.00 Name: ENSP00000397863/1-242 Len: 242 Check: 4437 Weight: 1.00 Name: ENSBTAP00000046513/1-234 Len: 242 Check: 4680 Weight: 1.00 Name: bmy_14565T0/1-235 Len: 242 Check: 6698 Weight: 1.00 Name: BACU018178/1-235 Len: 242 Check: 5798 Weight: 1.00 // 1 50 ENSTTRP00000005540/1-241 MPRGFAWLRY LGILLGMALG NEGLEVWPLT RSEECAITGF LRDKLQYRNR ENSP00000397863/1-242 MPRGFTWLRY LGIFLGVALG NEPLEMWPLT QNEECTVTGF LRDKLQYRSR ENSBTAP00000046513/1-234 MPQGLAWLRY LGILLGMALG NEGLEPWPLT RSDECAITGF LRDKLQYRNR bmy_14565T0/1-235 MPRGFAWLRY LGILLGMALG NEGLEVWPLT QSEECAITGF LRDKLQYRNR BACU018178/1-235 MPRGFAWLRY LGILLGMALG NEGLEVWPLT RSEECAITGF LRDKLQYRNR 51 100 ENSTTRP00000005540/1-241 LQYMXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000397863/1-242 LQYMKHYFPI NYKISVPYEG VFRIANVTRL QRAQVSEREL RYLWVLVSLS ENSBTAP00000046513/1-234 LQYMKHYFPI NYRVSVPYEG VLRTANVTRL QRAQVSQQEL RYLWVLVSLS bmy_14565T0/1-235 LQYMKHYFPI NYRVSVPYEG VLRMANVTRL QRARVSQQEL RYLWVLVSLS BACU018178/1-235 LQYMKHYFPI NYRVSVPYEG VLRMANVTRL QRARVSQQEL RYLWVLVSLS 101 150 ENSTTRP00000005540/1-241 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXGVEVSP QVEAVLSLLS ENSP00000397863/1-242 ATESVQDVLL EGHPSWKYLQ EVETLLLNVQ QGLTDVEVSP KVESVLSLLN ENSBTAP00000046513/1-234 ATEWVQEVLL EGHPSWKYLE EVHTLLLDVK QGLGGVEVSP QVEAVLNLLS bmy_14565T0/1-235 ATEWVQEVLL EGHPSWKYLE EVHTLLLDVK QGLPGVEVSP QVEAVLSLLS BACU018178/1-235 ATEWVQEVLL EGHPSWKYLE EVHTLLLDVK QGLPGVEVSP QVEAVLSLLS 151 200 ENSTTRP00000005540/1-241 APG-SLKPVR PKALLDNCLR VMELLYCSCC KQSPVLNWQD CEVPRPQPHG ENSP00000397863/1-242 APGPNLKLVR PKALLDNCFR VMELLYCSCC KQSSVLNWQD CEVPSPQSCS ENSBTAP00000046513/1-234 APG-SLKLVR PKALLDNCFR VMQLLYCPCC KESSVLNWQD CEAPQPQPRS bmy_14565T0/1-235 APG-SLKPVR PKALLDNCLR VMELLYCSCC KQSSVLNWQD CEVPRPQPHS BACU018178/1-235 APG-SLKPVR PKALLDNCLR VMELLYCSCC KQSSVLNWQD CEVPRPQPHS 201 250 ENSTTRP00000005540/1-241 PEPSSQCVAA QLYPLRQQPP ASLPHPPGSV KLLRAQGEGR LP ENSP00000397863/1-242 PEPSLQYAAT QLYPPPPWSP SSPPHSTGSV RPVRAQGEGL LP ENSBTAP00000046513/1-234 P-ASAQCEAA QLYPLPQPPS TSLPRVLGPS AGPPTQ---- -- bmy_14565T0/1-235 PEPSSQCVAA QLYPLRQQPP TSLPHSPAST AGAPAQ---- -- BACU018178/1-235 PEPSSQCVAA QLYPLRQQPP ASLPHSPAST AGAPAQ---- --