KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:38 2014 Check: 00 .. Name: ENSTTRP00000006070/1-333 Len: 421 Check: 2436 Weight: 1.00 Name: ENSP00000381698/1-387 Len: 421 Check: 2031 Weight: 1.00 Name: ENSBTAP00000046530/1-409 Len: 421 Check: 557 Weight: 1.00 Name: bmy_07578T0/1-369 Len: 421 Check: 4439 Weight: 1.00 Name: BACU001463/1-360 Len: 421 Check: 2177 Weight: 1.00 // 1 50 ENSTTRP00000006070/1-333 ---------- ---------- ---------- ---------- ---------- ENSP00000381698/1-387 MAPPAGGAAA AASDLGSAAV LLAVHAAVRP LGAGPDAEAQ LRRLQLSADP ENSBTAP00000046530/1-409 MAPPAGG-TA AGSDPGSAAV LLAVHVAVRP LGAGLDVAAQ PRRLQLSADP bmy_07578T0/1-369 MAPPAGG-AA AASDPGSAAV LLAVHAA--- ---------- ---------- BACU001463/1-360 MARSSRRDRE LAEQLGT--- ---------- ---------- ---------- 51 100 ENSTTRP00000006070/1-333 ---------- -------VSL EWPLESVSYT VRGPSQHELQ PPPGGPGTLS ENSP00000381698/1-387 ERPGRFRLEL LGAGPGAVNL EWPLESVSYT IRGPTQHELQ PPPGGPGTLS ENSBTAP00000046530/1-409 ERPGRFRLEM LGAGPGAVIL EWPLESVSYT VRGPCQHELQ PPPGGPGTLS bmy_07578T0/1-369 ---------- -------VSL EWPLESVSYT VRGPSQHELQ PPPGGPGTLS BACU001463/1-360 ---------- -------VSL EWPLESVSYT VRGPSQHELQ PPPGGPGTLS 101 150 ENSTTRP00000006070/1-333 LHFANPQEAR RWAALVRGAT VEGQNGSD-- -SPALGSETC PVSPPSLLEV ENSP00000381698/1-387 LHFLNPQEAQ RWAVLVRGAT VEGQNGSKSN SPPALGPEAC PVSLPSPPEA ENSBTAP00000046530/1-409 LHFANPQEAQ RWAALVRDAT VEGQNGSDSL -PPALGPETR PVSPPSPLEV bmy_07578T0/1-369 LHFANPQEAQ RWAALVRGAT VEGQNGSDSQ -TPALGSETC PVSPPSLLEV BACU001463/1-360 LHFANPQEAQ RWAALVRGAT VEGQNGSDSQ -TPALGSETC PVSPPSLLEV 151 200 ENSTTRP00000006070/1-333 PATKAPKPKV DLPWRPGDLM EKEDLAGHLT RAIEGGDEKR AAHAAAILAQ ENSP00000381698/1-387 STLKGPPPEA DLPRSPGNLT EREELAGSLA RAIAGGDEKG AAQVAAVLAQ ENSBTAP00000046530/1-409 PTPKAPKPKV DLPWSPGDLM EKEELAGRLT RAVEGGDEKG AAQAAAILAQ bmy_07578T0/1-369 PATKAPQPKV DLPWRPGDLM EKEDLAGHLT RAIESGDEKR AAQAAAILAQ BACU001463/1-360 PATKAPQPKV DLPWRPGDLM EKEDLAGHLT RAIESGDEKR AAQAAAILAQ 201 250 ENSTTRP00000006070/1-333 HHVALSIQLQ EACFPPGPIR LQVTVED--- ---AASSAHI SLAVHPHSTI ENSP00000381698/1-387 HRVALSVQLQ EACFPPGPIR LQVTLEDAAS AASAASSAHV ALQVHPHCTV ENSBTAP00000046530/1-409 RHVALRVQLQ EAYFPPGPIR LQVTVED--- ---AASSAHV SLQVHPHCTI bmy_07578T0/1-369 HHVALSIQLQ EACFPPGPIR LQVTVED--- ---AASSAHV SLPAHPHSTI BACU001463/1-360 HHVALSIQLQ EACFPPGPIR LQVTVED--- ---AASSAHV SLPAHPHSTI 251 300 ENSTTRP00000006070/1-333 GALQEQVFSE FGFPPAVQRW VIGRCLCVPE YSLAFYGVRR DGDPAFLYLL ENSP00000381698/1-387 AALQEQVFSE LGFPPAVQRW VIGRCLCVPE RSLASYGVRQ DGDPAFLYLL ENSBTAP00000046530/1-409 RALQEQVFSE FGFPPAVQRW VIGRCLCVPE HSLAFYGVQR DGDPAFLYLL bmy_07578T0/1-369 GALQEQVFSE FGFPPAVQRW VIGRCLCVPE YSLAFYGVRR DGDPAFLYLL BACU001463/1-360 AALQEQVFSE FGFPPAVQRW VIGRCLCVPE YSLAFYGVQR DGDPAFLYLL 301 350 ENSTTRP00000006070/1-333 SAPREAPVAG RNPQHPQKMD GELGRLFPQS LGPKPLSQLA PACPTPFSPA ENSP00000381698/1-387 SAPREAPATG PSPQHPQKMD GELGRLFPPS LGLPPGPQ-- PAASSLPSPL ENSBTAP00000046530/1-409 SAPREAP--G RSPQRPQKVD GELGRLFPQS LGLPPTPQ-- PTSSSLPSPL bmy_07578T0/1-369 AAPREAP--G RNPQRPQKMD GELGRLFSQS LGLPQAPQ-- PAGSSLPNPL BACU001463/1-360 SAPREAP--G RNPQRPQKMD GELGRLFPQS LGLPQAPQ-- PAGSNLPNPL 351 400 ENSTTRP00000006070/1-333 GPALPAPSSM ---PQADPAV RCAAPRGPVL GTPFPQLPPS SYQR-SQGES ENSP00000381698/1-387 QPSWSCPSCT FINAPDRPGC EMCSTQRPCT WDPLAAAST- ---------- ENSBTAP00000046530/1-409 QPGWPCPSCT FINAPSRPGC EMCSTQRPCA WDPLPTASIQ QLPKVTRRED bmy_07578T0/1-369 QPGWPCPSCT FINAPSRPGC EMCSTQRPCA WDPLPTASTQ QLPKVTRRED BACU001463/1-360 QPGWPCPSCT FINAPSRPGC EMCSTQRPCA WDPRPTASTQ QLPKVTRRED 401 450 ENSTTRP00000006070/1-333 GPSLPGPRSL DPP------- - ENSP00000381698/1-387 ---------- ---------- - ENSBTAP00000046530/1-409 GPSLPGPRSL DPLLNLSGNL C bmy_07578T0/1-369 GPPLPDPRSL DPLLNVSGNL C BACU001463/1-360 GPSLPGPRSL DPLLNLSGNL C