KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:39 2014 Check: 00 .. Name: ENSTTRP00000002452/1-592 Len: 596 Check: 8591 Weight: 1.00 Name: ENSP00000328090/1-596 Len: 596 Check: 9108 Weight: 1.00 Name: ENSBTAP00000046574/1-578 Len: 596 Check: 5264 Weight: 1.00 Name: bmy_15323T0/1-364 Len: 596 Check: 2165 Weight: 1.00 Name: BACU011501/1-558 Len: 596 Check: 5317 Weight: 1.00 // 1 50 ENSTTRP00000002452/1-592 MGRGAREAAA QSRVGRASEA SVSPGQTIRA ----GEAQET AETPAKENHA ENSP00000328090/1-596 MGRGARAAAA QSRWGRASRA SVSPGRTIRS APAVGEAQET EAAPEKENRV ENSBTAP00000046574/1-578 -------LCG TQRAGPEAPP MATP------ -----EAQAT GEAPAKENQV bmy_15323T0/1-364 ---------- ---------- ---------- ---------- ---------- BACU011501/1-558 ---------- ---------- MASP------ -----EAQEM GETPAKESQV 51 100 ENSTTRP00000002452/1-592 ATGAEQTRAP ASPLSRSWLV RHFSLLLRRD RQAQKAGQLF SGLLALNMVF ENSP00000328090/1-596 DVGAEERAAA TRPRQKSWLV RHFSLLLRRD RQAQKAGQLF SGLLALNVVF ENSBTAP00000046574/1-578 ALGFEQTRAP ASPVERSWLA RHFSLLLRRD RQAQKAGQLF SGLLALNVVL bmy_15323T0/1-364 ---------- ---------- ---------- ---------- ---------- BACU011501/1-558 ATGAEQTRAP ASPLKRSWLV RHFSLLLRRD RQAQKAGQLF SGLLALNMVF 101 150 ENSTTRP00000002452/1-592 LGGAFICSMI FNNVAITLGD VWILLATLKA LALLWLLYYT ARTTRRPQAV ENSP00000328090/1-596 LGGAFICSMI FNKVAVTLGD VWILLATLKV LSLLWLLYYV ASTTRRPHAV ENSBTAP00000046574/1-578 LGGAFICSMV FNNVAVTLGD VWILLAALKV LSALWLLYYT AGTTRQPHAV bmy_15323T0/1-364 ---------- ---------- ---------- ---------- ---------- BACU011501/1-558 LGGAFICSMI FNNVAITLGD VWILLAVLKA LALLWLLYYT A---RTPPPA 151 200 ENSTTRP00000002452/1-592 LHRDPHAGPA WVRGSLVLFG SCAICLNVFR VGYGMSHIRC KSQLELIFPA ENSP00000328090/1-596 LYQDPHAGPL WVRGSLVLFG SCTFCLNIFR VGYDVSHIRC KSQLDLVFSV ENSBTAP00000046574/1-578 LHRDPHAGPV WVRGSLVLFG SCTVCLNVFR VGYDVSHIRC KSQLELVFPA bmy_15323T0/1-364 ---------- ---------- ---------- ---------- ---------- BACU011501/1-558 ASRAPPGPAR RTR----LGA GCTICLNVFR VGYGMSHIQC KSQLELIFPA 201 250 ENSTTRP00000002452/1-592 VEIIFIGIQT WVLWKHSKDC VQIQTNFTXX XXXXXXXXXX XXXXXXXXXX ENSP00000328090/1-596 IEMVFIGVQT WVLWKHCKDC VRVQTNFTRC GLMLTLATNL LLWVLAVTND ENSBTAP00000046574/1-578 IEVVFISVQT WVLWKHCKDC VQIQTNFTRC GLMLTLATNL LLWLLAVSND bmy_15323T0/1-364 ---------- ---------- ---------- --MLTLATNL LLWLLAVTND BACU011501/1-558 VEIIFIGIQT WVLWKHSKDC VQIQTNFTRC GLMLTLATNL LLWLLAVTND 251 300 ENSTTRP00000002452/1-592 XXXXXXXXXX XXXXXXXXXN NTNTCLCLNV TACEVFQKGY LMLYPFSTEY ENSP00000328090/1-596 SMHREIEAEL GILMEKSTGN ETNTCLCLNA TACEAFRRGF LMLYPFSTEY ENSBTAP00000046574/1-578 SMHHEIEAEL SALMKKISGN GTNTCLCLNI TMCEVFRKGY LMLYPFSTEY bmy_15323T0/1-364 SMHHEIETEL SALMDKFSGN NTNTCLCLNV TMCEVFQKGY LMLYPFSTEY BACU011501/1-558 SVHREIETEV SALMEKFSDN NTNTCLCLNV TMCEVFQKGY LMLYPFSTEY 301 350 ENSTTRP00000002452/1-592 SLICCGMLFV XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000328090/1-596 CLICCAVLFV MWKNVGRHVA PHMGAHPATA PFHLHGAIFG PLLGLLVLLA ENSBTAP00000046574/1-578 CLICCTVLFV MWRNVGRRLA PAAGAPPGAP SFHLHGAIFG PLLGLLVLVA bmy_15323T0/1-364 SLICCGMLFV MWKNVGRRLA PHTGSHPSTP PFHLHGAILG PLLGLLVLVA BACU011501/1-558 SLICCGMLFV MWKNVGRRLA PHTGSHPSTP PFHLHGAILG PLLGLLVLVA 351 400 ENSTTRP00000002452/1-592 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000328090/1-596 GVCVFVLFQI EASGPAIACQ YFTLYYAFYV AVLPTMSLAC LAGTAIHGLE ENSBTAP00000046574/1-578 GVCVFVLFQI QASGPAIAHQ YFTVYYAFYV AALPAMSLAC LAGTAIHRLE bmy_15323T0/1-364 GTCVFVLFQI QASGPAIARQ YFIIYYAFYA AALPTMSLAC LAGTAIHGLE BACU011501/1-558 GTCVFVLFQI QASGPAIARQ YFIIYYAFYA AALPTMSLAC LAGMAIHGLE 401 450 ENSTTRP00000002452/1-592 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000328090/1-596 ERELDTVKNP TRSLDVVLLM GAALGQMGIA YFSIVAIVAK RPHELLNRLI ENSBTAP00000046574/1-578 ERELDTLKNP TRSLDVVLLM GAALGQMGIS YFSIVAIVAT RPHELLNCLI bmy_15323T0/1-364 ERELDTLKNP TRSLDVVLLM GAALGQMGIS YFSIVAIVAT RPHELLNHLI BACU011501/1-558 ERELDTLKNP TRSLDVVLLM GAALGQMGIS YFSIVAIVAT HPHELLNHLI 451 500 ENSTTRP00000002452/1-592 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXPRRGSLL ENSP00000328090/1-596 LAYSLLLILQ HIAQNLFIIE GLHRRPLWET VPEGLAGKQE AEPPRRGSLL ENSBTAP00000046574/1-578 LAYSLLLILQ HMAQNLFIIE GLHRRPLWEV TPESLAGKWE AEPPRRGSLL bmy_15323T0/1-364 LAYSLLLILQ HIAQNLFIIE GLHRRPLWEA APESLAGKWE AEPPRRGSLL BACU011501/1-558 LAYSLLLILQ HIAQNLFIIE GLHRRPLWEA APESLAGKWE AEPPRRGSLL 501 550 ENSTTRP00000002452/1-592 ELGQDLRQAS LAYIHSYSHL NWKRRALKEI SLFLILCNIT LWMMPAFGIH ENSP00000328090/1-596 ELGQGLQRAS LAYIHSYSHL NWKRRALKEI SLFLILCNIT LWMMPAFGIH ENSBTAP00000046574/1-578 ELGQDLRRAS LAYIHSYSHL NWKRRALKEI SLFLILCNIT LWMMPAFGIH bmy_15323T0/1-364 ELGQDLRQAS LAYIHSYSHL NWKRRALKEI SLFLILCNIT LWMMPAFGIH BACU011501/1-558 ELGQDLRQAS LTYIHSYSHL NWKRRALKEI SLFLILCNIT LWMMPAFGIH 551 600 ENSTTRP00000002452/1-592 PEFENGLEKD FYGYRTWFTI VNFGLPLGVF YRMHSVGVLV EVYLGA ENSP00000328090/1-596 PEFENGLEKD FYGYQIWFAI VNFGLPLGVF YRMHSVGGLV EVYLGA ENSBTAP00000046574/1-578 PEFENGLEKD FYGYRTWFTV VNFGLPLGVF YRMHSVGGLV EVYLGA bmy_15323T0/1-364 PEFENGLEKD FYGYQTWFTI VNFGLPLGVF YRMHSVGVLV EVYLGA BACU011501/1-558 PEFENGLEKD FYGYQTWFTI VNFGLPLGVF YRMHSVGVLV EVYLGA