KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:57:40 2014 Check: 00 .. Name: bmy_11613T0/1-292 Len: 320 Check: 6588 Weight: 1.00 Name: ENSP00000244217/1-176 Len: 320 Check: 8523 Weight: 1.00 Name: ENSBTAP00000046594/1-175 Len: 320 Check: 7444 Weight: 1.00 Name: BACU001807/1-162 Len: 320 Check: 2441 Weight: 1.00 // 1 50 bmy_11613T0/1-292 MARVLKAATA SAVGEYSGLG DVRGGVCAGR DARSRGGRAV ASAPGSAALC ENSP00000244217/1-176 MARVLKAAAA NAV------- ---------- ---------- ---------- ENSBTAP00000046594/1-175 MARVLKVAAA SAA------- ---------- ---------- ---------- BACU001807/1-162 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_11613T0/1-292 PRVTTSLSAP GGEGTRLRGS KAGPEANAVN GRGTVRLCLP RPVRDGGETR ENSP00000244217/1-176 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000046594/1-175 ---------- ---------- ---------- ---------- ---------- BACU001807/1-162 ---------- ---------- ---------- ---------- ---------- 101 150 bmy_11613T0/1-292 GRTSPVKTQA EALGSASILL RTLEEGHQFS EEGSQCLLHF SGLFHRLQTP ENSP00000244217/1-176 ---------- ---------- ---------- ---------- -GLFSRLQAP ENSBTAP00000046594/1-175 ---------- ---------- ---------- ---------- -GLFPRLRTP BACU001807/1-162 ---------- ---------- ---------- ---------- ---------- 151 200 bmy_11613T0/1-292 VPTVRTFSMS LSSHQVAGPV WNLGRLNHVA VAVPDLEKAK AFYKNVLGAQ ENSP00000244217/1-176 IPTVRASSTS QPLDQVTGSV WNLGRLNHVA IAVPDLEKAA AFYKNILGAQ ENSBTAP00000046594/1-175 VSTVRT-SAS LSSHPGAGPV WNLGRLNHVA VAVPDLEKAR AFYKNVLGAE BACU001807/1-162 --------MS LSSHQVAGPV WNLGRLNHVA VAVPDLEKAK AFYKNVLGAQ 201 250 bmy_11613T0/1-292 VGETVPLPEH GVSVVFVNLG NTKMELLHPL GNDSPIAGFL QKNKAGGMHH ENSP00000244217/1-176 VSEAVPLPEH GVSVVFVNLG NTKMELLHPL GRDSPIAGFL QKNKAGGMHH ENSBTAP00000046594/1-175 VGEPVPLPEH GVSVVFVNLG NTKMELLHPL GSDSPIAGFL KKNKAGGMHH BACU001807/1-162 VGETVPLPEH GVSVVFVNLG NTKMELLHPL GNDSPIAGFL QKNKAGGMHH 251 300 bmy_11613T0/1-292 ICIEAT---- --------YC HCHQKLPLSS FREMSGSNYT KATEVGQKRF ENSP00000244217/1-176 ICIE------ ---------- VDNINAAVMD LKKKKIRSLS EEVKIGAHGK ENSBTAP00000046594/1-175 VCIE------ ---------- VDNINVAVMD LKEKKIRILS EEAKIGAHGK BACU001807/1-162 ICIESRRMIF QDRGELLFHQ VDNINAAVMD LKEKKIRILS EEAKIGAHGK 301 350 bmy_11613T0/1-292 ESLL------ ---------- ENSP00000244217/1-176 PVIFLHPKDC GGVLVELEQA ENSBTAP00000046594/1-175 PVIFLHPSDC GGVLVELEQA BACU001807/1-162 PVIFLHPKDC GGVLVELEQV