KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:40 2014 Check: 00 .. Name: ENSP00000381045/1-875 Len: 878 Check: 912 Weight: 1.00 Name: ENSBTAP00000046597/1-875 Len: 878 Check: 3291 Weight: 1.00 Name: ENSTTRP00000005662/1-853 Len: 878 Check: 3619 Weight: 1.00 Name: bmy_11592T0/1-875 Len: 878 Check: 3953 Weight: 1.00 Name: BACU007870/1-789 Len: 878 Check: 6902 Weight: 1.00 // 1 50 ENSP00000381045/1-875 MEKLHQCYWK SGEPQSDDIE ASRMKRAAAK HLIERYYHQL TEGCGNEACT ENSBTAP00000046597/1-875 --MATACKRS SGEPQSDDIE ASRMKRAAAK HLIERYYHQL TEGCGNEACT ENSTTRP00000005662/1-853 ---------- ---------- ---MKRAAAK HLIERYYHQL TEGCGNDACT bmy_11592T0/1-875 --MATACKRS SGEPQSDDIE ASRMKRAAAK HLIERYYHQL TEGCGNEACT BACU007870/1-789 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000381045/1-875 NEFCASCPTF LRMDNNAAAI KALELYKINA KLCDPHPSKK GASSAYLENS ENSBTAP00000046597/1-875 NEFCASCPTF RRMDNNAAAI KALELYKINA KLCDPHPSKK GASSAYLENS ENSTTRP00000005662/1-853 NEFCASCPTF RRMDNNAAAI KALELYKINA KLCDPHPSKK GASSAYLENS bmy_11592T0/1-875 NEFCASCPTF RRMDNNAAAI KALELYKINA KLCDPHPSKK GASSAYLENS BACU007870/1-789 ---------- --MDNNAAAI KALELYKINA KLCDPHPSKK GASSAYLENS 101 150 ENSP00000381045/1-875 KGAPNNSCSE IKMNKK---G ARIDFKDVTY LTEEKVYEIL ELCREREDYS ENSBTAP00000046597/1-875 KGASNN-CSD IKMNKKDGQG ARDDFKDVTY LTEEMVYEIL ELCREREDYS ENSTTRP00000005662/1-853 KGAPNN-CSD MKMNKKDGQG ARDDFKDVTY LTEETVYEIL ELCREREDYS bmy_11592T0/1-875 KGAPNN-CSD VKMNKKDGQG ARDDFKDVTY LTEETVYEIL ELCREREDYS BACU007870/1-789 KGAPNN-CSD VKMNKKDGQG ARDDFKDVTY LTEETVYEIL ELCREREDYS 151 200 ENSP00000381045/1-875 PLIRVIGRVF SSAEALVQSF RKVKQHTKEE LKSLQAKDED KDEDEKEKAA ENSBTAP00000046597/1-875 PLIRVIGRVF SSAEALVQSF RKVKQHTKEE LKSLQGKDED KDEDEKEKAA ENSTTRP00000005662/1-853 PLIRVIGRVF SSAEALVQSF RKVKQHTKEE LKSLQGKDED KDEDEKEKAA bmy_11592T0/1-875 PLIRVIGRVF SSAEALVQSF RKVKQHTKEE LKSLQGKDED KDEDEKEKAA BACU007870/1-789 PLIRVIGRVF SSAEALVQSF RKVKQHTKEE LKSLQGKDED KDEDEKEKAA 201 250 ENSP00000381045/1-875 CSAAAMEEDS EASSSRIGDS SQGDNNLQKL GPDDVSVDID AIRRVYTRLL ENSBTAP00000046597/1-875 CSAAAMEEDS EASSSRISDS SQGDNNLQKL GPDDVSVDIE AIRRVYTRLL ENSTTRP00000005662/1-853 CSAAAMEEDS EASSSRISDS SQGDNNLQKL GPDDVSVDIE AIRRVYTRLL bmy_11592T0/1-875 CSAAAMEEDS EASSSRISDS SQGDNNLQKL GPDDVSVDIE AIRRVYTRLL BACU007870/1-789 CSAAAMEEDS EASSSRISDS SQGDNNLQKL GPDDVSVDIE AIRRVYTRLL 251 300 ENSP00000381045/1-875 SNEKIETAFL NALVYLSPNV ECDLTYHNVY SRDPNYLNLF IIVMENRNLH ENSBTAP00000046597/1-875 SNEKIETAFL NALVYLSPNV ECDLTYHNVY SRDPNYLNLF IIVMENRNLH ENSTTRP00000005662/1-853 SNEKIETAFL NALVYLSPNV ECDLTYHNVY SRDPNYLNLF IIVMENRNLH bmy_11592T0/1-875 SNEKIETAFL NALVYLSPNV ECDLTYHNVY SRDPNYLNLF IIVMENRNLH BACU007870/1-789 SNEKIETAFL NALVYLSPNV ECDLTYHNVY SRDPNYLNLF IIVMENRNLH 301 350 ENSP00000381045/1-875 SPEYLEMALP LFCKAMSKLP LAAQGKLIRL WSKYNADQIR RMMETFQQLI ENSBTAP00000046597/1-875 SPEYLEMALP LFCKAMSKLP LAAQGKLVRL WSKYSADQIR RMMETFQQLI ENSTTRP00000005662/1-853 SPEYLEMALP LFCKAMSKLP LAAQGKLVRL WSKYSADQIR RMMETFQQLI bmy_11592T0/1-875 SPEYLEMALP LFCKAMSKLP LAAQGKLVRL WSKYSADQIR RMMETFQQLI BACU007870/1-789 SPEYLEMALP LFCKAMSKLP LAAQGKLVRL WSKYSADQIR RMMETFQQLI 351 400 ENSP00000381045/1-875 TYKVISNEFN SRNLVNDDDA IVAASKCLKM VYYANVVGGE VDTNHNEEDD ENSBTAP00000046597/1-875 TYKVISTDFN NRNLVNDDDA IVAASKCLKM VYYANVVGGE VDTNHNEEDD ENSTTRP00000005662/1-853 TYKVISTDFN NRNLVNDDDA IVAASKCLKM VYYANVVGGE VDTNHNEEDD bmy_11592T0/1-875 TYKVISTDFN NRNLVNDDDA IVAASKCLKM VYYANVVGGE VDTNHNEEDD BACU007870/1-789 TYKVISTDFN NRNLVNDDDA IVAASKCLKM VYYANVVGGE VDTNHNEEDD 401 450 ENSP00000381045/1-875 EEPIPESSEL TLQELLGEER RNKKGPRVDP LETELGVKTL DCRKPLIPFE ENSBTAP00000046597/1-875 EEPLPESSEL TLQELLGEER RNKKGPRVDP LETELAVKTL DCRKPLIPFE ENSTTRP00000005662/1-853 EEPIPESSEL TLQELLGEER RNKKGPRVDP LETELAVKTL DCRKPLIPFE bmy_11592T0/1-875 EEPIPESSEL TLQELLGEER RNKKGPRVDP LETELAVKTL DCRKPLIPFE BACU007870/1-789 EEPIPESSEL TLQELLGEER RNKKGPRVDP LETELAVKTL DCRKPLIPFE 451 500 ENSP00000381045/1-875 EFINEPLNEV LEMDKDYTFF KVETENKFSF MTCPFILNAV TKNLGLYYDN ENSBTAP00000046597/1-875 EFINEPLNDV LEMDKDYTFF KVETENKFSF MTCPFILNAV TKNLGLYYDN ENSTTRP00000005662/1-853 EFINEPLNDV LEMDKDYTFF KVETENKFSF MTCPFILNAV TKNLGLYYDN bmy_11592T0/1-875 EFINEPLNDV LEMDKDYTFF KVETENKFSF MTCPFILNAV TKNLGLYYDN BACU007870/1-789 EFINEPLNDV LEMDKDYTFF KVETENKFSF MTCPFILNAV TKNLGLYYDN 501 550 ENSP00000381045/1-875 RIRMYSERRI TVLYSLVQGQ QLNPYLRLKV RRDHIIDDAL VRLEMIAMEN ENSBTAP00000046597/1-875 RIRMYSERRI TVLYSLVQGQ QLNPYLRLKV RRDHIIDDAL VRLEMIAMEN ENSTTRP00000005662/1-853 RIRMYSERRI TVLYSLVQGQ QLNPYLRLKV RRDHIIDDAL VRLEMIAMEN bmy_11592T0/1-875 RIRMYSERRI TVLYSLVQGQ QLNPYLRLKV RRDHIIDDAL VRLEMIAMEN BACU007870/1-789 RIRMYSERRI TVLYSLVQGQ QLNPYLRLKV RRDHIIDDAL VRLEMIAMEN 551 600 ENSP00000381045/1-875 PADLKKQLYV EFEGEQGVDE GGVSKEFFQL VVEEIFNPDI GMFTYDESTK ENSBTAP00000046597/1-875 PADLKKQLYV EFEGEQGVDE GGVSKEFFQL VVEEIFNPDI GMFTYDESTK ENSTTRP00000005662/1-853 PADLKKQLYV EFEGEQGVDE GGVSKEFFQL VVEEIFNPDI GMFTYDESTK bmy_11592T0/1-875 PADLKKQLYV EFEGEQGVDE GGVSKEFFQL VVEEIFNPDI GMFTYDESTK BACU007870/1-789 PADLKKQLYV EFEGEQGVDE GGVSKEFFQL VVEEIFNPDI GMFTYDESTK 601 650 ENSP00000381045/1-875 LFWFNPSSFE TEGQFTLIGI VLGLAIYNNC ILDVHFPMVV YRKLMGKKGT ENSBTAP00000046597/1-875 LFWFNPSSFE TEGQFTLIGI VLGLAIYNNC ILDVHFPMVV YRKLMGKKGT ENSTTRP00000005662/1-853 LFWFNPSSFE TEGQFTLIGI VLGLAIYNNC ILDVHFPMVV YRKLMGKKGT bmy_11592T0/1-875 LFWFNPSSFE TEGQFTLIGI VLGLAIYNNC ILDVHFPMVV YRKLMGKKGT BACU007870/1-789 LFWFNPSSFE TEGQFTLIGI VLGLAIYNNC ILD------- ---------- 651 700 ENSP00000381045/1-875 FRDLGDSHPV LYQSLKDLLE YEGNVEDDMM ITFQISQTDL FGNPMMYDLK ENSBTAP00000046597/1-875 FLDLGDSHPV LYQSLKDLLE YEGNVEDDMM ITFQISQTDL FGNPMMYDLK ENSTTRP00000005662/1-853 FLDLGDSHPV LYQSLKDLLE YEGNVEDDMM ITFQISQTDL FGNPMMYDLK bmy_11592T0/1-875 FLDLGDSHPV LYQSLKDLLE YEGNVEDDMM ITFQISQTDL FGNPMMYDLK BACU007870/1-789 ---------V LYQSLKDLLE YEGNVEDDMM ITFQISQTDL FGNPMMYDLK 701 750 ENSP00000381045/1-875 ENGDKIPITN ENRKEFVNLY SDYILNKSVE KQFKAFRRGF HMVTNESPLK ENSBTAP00000046597/1-875 ENGDKIPITN ENRKEFVNLY SDYILNKSVE KQFKAFRRGF HMVTNESPLK ENSTTRP00000005662/1-853 ENGDKIPITN ENRKEFVNLY SDYILNKSVE KQFKAFRRGF HMVTNESPLK bmy_11592T0/1-875 ENGDKIPITN ENRKEFVNLY SDYILNKSVE KQFKAFRRGF HMVTNESPLK BACU007870/1-789 ENGDKIPITN ENRKEFVNLY SDYILNKSVE KQFKAFRRGF HMVTNESPLK 751 800 ENSP00000381045/1-875 YLFRPEEIEL LICGSRNLDF QALEETTEYD GGYTRDSVLI REFWEIVHSF ENSBTAP00000046597/1-875 YLFRPEEIEL LICGSRNLDF QALEETTEYD GGYTRDSVVI REFWEIVHSF ENSTTRP00000005662/1-853 YLFRPEEIEL LICGSRNLDF QALEETTEYD GGYTRDSVVI REFWEIVHSF bmy_11592T0/1-875 YLFRPEEIEL LICGSRNLDF QALEETTEYD GGYTRDSVVI REFWEIVHSF BACU007870/1-789 YLFRPEEIEL LICGSRNLDF QALEETTEYD GGYTRDSVVI REFWEIVHSF 801 850 ENSP00000381045/1-875 TDEQKRLFLQ FTTGTDRAPV GGLGKLKMII AKNGPDTERL PTSHTCFNVL ENSBTAP00000046597/1-875 TDEQKRLFLQ FTTGTDRAPV GGLGKLKMII AKNGPDTERL PTSHTCFNVL ENSTTRP00000005662/1-853 TDEQKRLFLQ FTTGTDRAPV GGLGKLKMII AKNGPDTE-L PTSHTCFNVL bmy_11592T0/1-875 TDEQKRLFLQ FTTGTDRAPV GGLGKLKMII AKNGPDTERL PTSHTCFNVL BACU007870/1-789 TDEQKRLFLQ FTTGTDRAPV GGLGKLKMII AKNGPDTERL PTSHTCFNVL 851 900 ENSP00000381045/1-875 LLPEYSSKEK LKERLLKAIT YAKGFGML ENSBTAP00000046597/1-875 LLPEYSSKEK LKERLLKAIT YAKGFGML ENSTTRP00000005662/1-853 LLPEYSSKEK LKERLLKAIT YAKGFGML bmy_11592T0/1-875 LLPEYSSKEK LKERLLKAIT YAKGFGML BACU007870/1-789 LLPEYSSKEK LKERLLKAIT YAKGFGML