KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:41 2014 Check: 00 .. Name: BACU009562/1-126 Len: 228 Check: 8631 Weight: 1.00 Name: bmy_11300T0/1-156 Len: 228 Check: 5842 Weight: 1.00 Name: ENSTTRP00000004636/1-218 Len: 228 Check: 9667 Weight: 1.00 Name: ENSP00000355651/1-218 Len: 228 Check: 9064 Weight: 1.00 Name: ENSBTAP00000046611/1-218 Len: 228 Check: 9611 Weight: 1.00 // 1 50 BACU009562/1-126 ---------- ---------- ---------- ---------- --MHPVGVAY bmy_11300T0/1-156 -----MAETY DFLFKFLVIG SAGTGKSCLL HQFIENKFKQ DSNHTIGVEF ENSTTRP00000004636/1-218 MSQTAMSETY DFLFKFLVIG NAGTGKSCLL HQFIENKFKD DSNHTIGVEF ENSP00000355651/1-218 MSQTAMSETY DFLFKFLVIG NAGTGKSCLL HQFIEKKFKD DSNHTIGVEF ENSBTAP00000046611/1-218 MSQTAMSETY DFLFKFLVIG NAGTGKSCLL HQFIEKKFKD DSNHTIGVEF 51 100 BACU009562/1-126 TWGTQVVCVA VKVVGIALRV PERCEW-CEW LESVASLIK- -YLCCSHNLV bmy_11300T0/1-156 --GSRVVNVG GKTVKLQI-- -----WDTAG QERFRSVTRS YYRGAAGALL ENSTTRP00000004636/1-218 --GSKIINVG GKYVKLQI-- -----WDTAG QERFRSVTRS YYRGAAGALL ENSP00000355651/1-218 --GSKIINVG GKYVKLQI-- -----WDTAG QERFRSVTRS YYRGAAGALL ENSBTAP00000046611/1-218 --GSKIINVG GKYVKLQI-- -----WDTAG QERFRSVTRS YYRGAAGALL 101 150 BACU009562/1-126 S---RSRETY NALTNWLTDA RMLASQNIVI ILCGNKKDLD ADREVTFLEA bmy_11300T0/1-156 VYDITR---- -----WVHGV G--------- ---------- ---------- ENSTTRP00000004636/1-218 VYDITSRETY NALTNWLTDA RMLASQSIVI ILCGNKKDLD PDREVTFLEA ENSP00000355651/1-218 VYDITSRETY NALTNWLTDA RMLASQNIVI ILCGNKKDLD ADREVTFLEA ENSBTAP00000046611/1-218 VYDITSRETY NALTNWLTDA RMLASQNIVI ILCGNKKDLD TDREVTFLEA 151 200 BACU009562/1-126 SRFAQEN--- ---------G KW--PFA-CH TCWGFQMQL- ---------- bmy_11300T0/1-156 ---------- -------RGG AWAAPHPRPP PSWFPSPQPG DVQLAGRLAD ENSTTRP00000004636/1-218 SRFAQENELM FLETSALTGE NVEEAFVQCA RKILNKIESG ELD-PERMGS ENSP00000355651/1-218 SRFAQENELM FLETSALTGE NVEEAFVQCA RKILNKIESG ELD-PERMGS ENSBTAP00000046611/1-218 SRFAQENELM FLETSALTGE NVEEAFVQCA RKILNKIESG ELD-PERMGS 201 250 BACU009562/1-126 ---------- ---------- -------- bmy_11300T0/1-156 GRPHAGQPQY RGHSLWQQEG PGP---GA ENSTTRP00000004636/1-218 GIQYGDAALR QLRSPRRAQA PSAQECGC ENSP00000355651/1-218 GIQYGDAALR QLRSPRRAQA PNAQECGC ENSBTAP00000046611/1-218 GIQYGDAALR QLRSPRRAQA PSAQECGC