KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 17:57:41 2014 Check: 00 .. Name: ENSP00000373278/1-356 Len: 745 Check: 4119 Weight: 1.00 Name: bmy_08834T0/1-691 Len: 745 Check: 1090 Weight: 1.00 Name: ENSBTAP00000046618/1-356 Len: 745 Check: 3547 Weight: 1.00 Name: BACU014663/1-367 Len: 745 Check: 4224 Weight: 1.00 Name: ENSTTRP00000006679/1-242 Len: 745 Check: 9624 Weight: 1.00 // 1 50 ENSP00000373278/1-356 ---------- ---------- ---------- ---------- ---------- bmy_08834T0/1-691 MTDDFTENLP NSGLALDAVD FVKRKEHCPD SMAFKVEGKS KTGGYSCKML ENSBTAP00000046618/1-356 ---------- ---------- ---------- ---------- ---------- BACU014663/1-367 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006679/1-242 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000373278/1-356 ---------- ---------- ---------- ---------- ---------- bmy_08834T0/1-691 QVSRLFPLSH YWILSLIIVI ECSTAYLRLF MNSVYFSFSP NMEGRVVKTK ENSBTAP00000046618/1-356 ---------- ---------- ---------- ---------- ---------- BACU014663/1-367 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006679/1-242 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000373278/1-356 ---------- ---------- ---------- ---------- ---------- bmy_08834T0/1-691 LLDGDIYSSA CIYVPYLVIN LRHDFIGTPL KDSSTLLTTF SFSSSFAPSG ENSBTAP00000046618/1-356 ---------- ---------- ---------- ---------- ---------- BACU014663/1-367 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006679/1-242 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000373278/1-356 ---------- ---------- ---------- ---------- ---------- bmy_08834T0/1-691 CGSNFENQPS VGEKAIIMDF PKLSIDAGAS ELKSAFSDGS KMDRLLGNFF ENSBTAP00000046618/1-356 ---------- ---------- ---------- ---------- ---------- BACU014663/1-367 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006679/1-242 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000373278/1-356 ---------- ----MDKEKL DVKI--EYCN YAMDSSVEN- MYVNKVWVQC bmy_08834T0/1-691 HSFNMINSSQ LNAFMEKGKL NSKMIAEYCN TAVDSSVENS MYVNKVWVQC ENSBTAP00000046618/1-356 ---------- ----MEKGKF DSKII-ECCN MAMDSSVENN MYINKVWVQC BACU014663/1-367 ---------- ----MEKGKL NSKMIAEYCN TAVDSSVENN MYVNKVWVQC ENSTTRP00000006679/1-242 ---------- ---------- ---------- ---------- ---------- 251 300 ENSP00000373278/1-356 ENENCLKWRL LSSEDSAKVD HDEPWYCFMN TDSRYNNCSI SEEDFPEESQ bmy_08834T0/1-691 ENESCLKWRL LSSEDAAKVD HNEPWYCFMN TDLRYNKCSV SEEDFPEESQ ENSBTAP00000046618/1-356 ENESCLKWRL LSNEDKAKVN HSEPWYCFMN TDSKYNKCSV SEEDFPEESQ BACU014663/1-367 ENESCLKWRF LSSEDAAKVD HNEPWYCFMN TDLRYNKCSV SEEDFPEESQ ENSTTRP00000006679/1-242 ---------- ---------- ---------- ---------- ---------- 301 350 ENSP00000373278/1-356 LHQCGFKIVY SQLPLGSLVL ---------- ---------- ---------V bmy_08834T0/1-691 LHQSGFKIXY SQLPLGSLVL DGHEEELDGY VYEHSFLKLL MKIKNEAQFL ENSBTAP00000046618/1-356 LHQSGYKIVY SQLPLGSLVL ---------- ---------- ---------V BACU014663/1-367 LHQSGFKIVY SQLPLGSLVL ---------- ---------- ---------V ENSTTRP00000006679/1-242 ---------- ---------- ---------- ---------- ---------- 351 400 ENSP00000373278/1-356 KLQNWP---- ---------- ---------S WPGILCPDRF KGKYVTYDPD bmy_08834T0/1-691 VLPKFPFPPA NGFQHLMKSE TMMDVAAGEN WPGILCPDPF KGKYVTYDLD ENSBTAP00000046618/1-356 KLKNWP---- ---------- ---------S WPGILCPDPF KGKYVTYDLD BACU014663/1-367 KLQTWP---- ---------- ---------S WPGILCPDPF KRKYVTYDQD ENSTTRP00000006679/1-242 ---------- ---------- ---------- WPGILCPDPF KGKYVTYDLD 401 450 ENSP00000373278/1-356 GNVEEYHIEF LGDPHSRSWI KATFVGHYSI TL-------- -----KPEKC bmy_08834T0/1-691 GDVEQYHIEF LGDPHSRSWI NATFVGHYSI TLKLSQRKYG YKNSHKPGKC ENSBTAP00000046618/1-356 GDVEQYHVEF LGDPHSRTWI DADFVGHYSI TL-------- -----KPEKC BACU014663/1-367 GDVEQYHIEF LGDPHSRSWI NATFVGHYSI TL-------- -----KPGTC ENSTTRP00000006679/1-242 GDVEQYHVEF LGDPHSRSWI DAAFVGHYSI TL-------- -----KPGKC 451 500 ENSP00000373278/1-356 KNKKKWYKSA LQEACLLYGY SHEQRLEMCC LSKL------ ----QDKSET bmy_08834T0/1-691 KNKKKWYKSA LQEAYLLYGY SHEQRLERCC LSKQDSKHLF SLIVLDKSKA ENSBTAP00000046618/1-356 K-KNKWYKSA LQEAYLLYGC SHEQRLERCY LSK------- ----QDKSKA BACU014663/1-367 KNKKKWYKSA LQEAYLLYGC SHEQRLERSV VHFFEAAIPY YL--TDKSKA ENSTTRP00000006679/1-242 TNKKKWYKSA LQEAYLLYGY SHEQRLERCC LSK------- ----QDKSKA 501 550 ENSP00000373278/1-356 HDKVAALVKK R--------- ---------- ---------- ---------- bmy_08834T0/1-691 DGKVAVVAKK RNSCTATHLI HLALYASFHK DKYYNRSLLL VSSTRQRDTS ENSBTAP00000046618/1-356 AGKVTVVAKK R--------- ---------- ---------- ---------- BACU014663/1-367 DGKVAVVAKK R--------- ---------- ---------- ---------- ENSTTRP00000006679/1-242 DGKVAVVAKK G--------- ---------- ---------- ---------- 551 600 ENSP00000373278/1-356 ---------- ---------- ---------- ---------- ---------- bmy_08834T0/1-691 GKNNLPKGNE NIGFSFYMMT FDKEFIYIIQ GEEGRVDIGG RHSYWMSRPF ENSBTAP00000046618/1-356 ---------- ---------- ---------- ---------- ---------- BACU014663/1-367 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000006679/1-242 ---------- ---------- ---------- ---------- ---------- 601 650 ENSP00000373278/1-356 -----KQTSK NNIEKKKPKF RKRKRKAILK CSFENVYSDD ALSKENR--- bmy_08834T0/1-691 LEVEQMQVAK NNTKKKKPKF RKRKRKTVLK SSFENVCSDD ALSKENMASA ENSBTAP00000046618/1-356 -----VQISK NNTEKKNPKF RKRKRKAVLK SCFENVCSDD ALSKENM--- BACU014663/1-367 -----MQVSK NNTKKKKPQF RKRKRKTVLK SSFENVCSDD ALSKENM--- ENSTTRP00000006679/1-242 -----MQVSK NNTQKKKPKF --RKRKAILK SSFENVCSDD ALSKENM--- 651 700 ENSP00000373278/1-356 VVCETEVLLK ELEQMLQQAL QPTATPDESE EGHGEEINMG EKLSKCSPEA bmy_08834T0/1-691 VVGGNTSI-- ---NMLQSRL LYST----FI GVLG--VPKG EKEEKQQPRA ENSBTAP00000046618/1-356 VVSETEFLLK ELEQMLEQAL EHTTTQRQFE EECGEEVNTG EKLPKCGPEV BACU014663/1-367 VVSETELLLK ELEQMLEQAL EPTAAPDESE GERGEETDTG EKLSKCGPEA ENSTTRP00000006679/1-242 VVSETELLLK ELEQMLEQVR EPTAAPDESE GERREETDTG EKLSKCGPEA 701 750 ENSP00000373278/1-356 PAGSLFENHY EEDYLVIDGI KLKAGECIED ITNKFKEIDA LMSEF bmy_08834T0/1-691 SS-------- ---------- ---------- ---------- ----- ENSBTAP00000046618/1-356 PAGSSLENHC EEDCLIIDGR RLKAGECIEN ITKKFKEIDA LMSEL BACU014663/1-367 PVGSSLENHC EEDYLVIDGL RLKAGECIEN ITNKFKEIDA LMSAL ENSTTRP00000006679/1-242 PVGSSLENHC DEDYLVIDGL RLKAGECIEN ITNKFKEIDA LMSAF