KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 17:57:42 2014 Check: 00 .. Name: ENSBTAP00000046639/1-548 Len: 632 Check: 7506 Weight: 1.00 Name: ENSP00000386959/1-557 Len: 632 Check: 8365 Weight: 1.00 Name: bmy_20667T0/1-530 Len: 632 Check: 185 Weight: 1.00 Name: BACU016412/1-316 Len: 632 Check: 5433 Weight: 1.00 // 1 50 ENSBTAP00000046639/1-548 ---------- ---------- ---------- ---------- ---------- ENSP00000386959/1-557 MGNSFCYTAV YCMINTGTQM DLEVKGVAAT SRSQIQPFFG RKKPLQQRWT bmy_20667T0/1-530 ---------- ---------M DLEVKGIAAS PTSQTQPFSK RKKPL----- BACU016412/1-316 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000046639/1-548 ---------- --RVPQLDLG SLVDSDEEDD LPYMPLSTEH IHFNPTNSSF ENSP00000386959/1-557 SESWTNQNSC PPVVPRLDLG SLVDSDDEDN FSYIPLSTAN L----PNSSS bmy_20667T0/1-530 ---------- ---------- ---------- ---------- ---------- BACU016412/1-316 ---------- ---------- ---------- ---------- ---------- 101 150 ENSBTAP00000046639/1-548 GFGWVTPCHK LYTQHHLYDL FLEQDRIPEN LPAPTDKYKL KHQQYKTEMT ENSP00000386959/1-557 TLGWVTPCQT PYTQYHLNK- -LDQNIIPEN LPAPTDKCKL KYQQCKTEIK bmy_20667T0/1-530 ---------- ---------- ---HDIIPEN LPVPTDKYKL KYQQYKTEMK BACU016412/1-316 ---------- ---------- ---------- ---------- --------MK 151 200 ENSBTAP00000046639/1-548 GGYKQYSQRN AEKAKS---- -----TNFPD SNRFVENGFY YDLTTLDRKA ENSP00000386959/1-557 EGYKQYSQRN AENTKSNVTH KQSPRNKIDE KCVQDEEANT DDLTTLDRKA bmy_20667T0/1-530 EGYKQHSQRN AQKTKSNITH RQTPRNKIDD KCVQGAEAIT DDLTTLDRKA BACU016412/1-316 EGYKQYSQRN AQKTKSNITH QQTLRNKIDD KCVQGAEAIT DDLTTLDRKA 201 250 ENSBTAP00000046639/1-548 LLQLGYAANP HILQRSTGKS DADVVAAEKK KQMVAEQVMI DHLSRAVISD ENSP00000386959/1-557 ILQQGYADNS CDKQQRARKL DAEIVAAEKK KQIVAEQVMI DHLSRAVISD bmy_20667T0/1-530 LLQQGYADNP YITQQSTRKS DAETVAAEKK KQTVAEQVTI DHLSRAVISD BACU016412/1-316 LLQ------- ---------- --ETVAAEKK KQTVAEQVMT DHL------- 251 300 ENSBTAP00000046639/1-548 PEQNLTSEKP EISHILPDSK LAPIRFRKRT LHETKIRTQS TLTENILSHK ENSP00000386959/1-557 PEQNLAIEQK ESDHILPDSK MTPLRFRKRT LHETKIRTHS TLTENVLSHK bmy_20667T0/1-530 PEQNLTTEKQ EIAHILPNSK LVPLRFRKRT LHETKIRTQS TLTESMLSHK BACU016412/1-316 ---------- ---------- ---------- ---------- ---------- 301 350 ENSBTAP00000046639/1-548 VQFDGRIISR NGRDACRELV GFFFTHDQSL TIYEYRQFGK NRTNVLPFIQ ENSP00000386959/1-557 LQFDGRIVSR NGRDACRELI GFFFTHDQSL TIYEYRQFGK NRTNVLPFIQ bmy_20667T0/1-530 VQFDGRIISR NGRDACRELV GFFFTHDQSL TIYEIRQFGK NRTNVLPFIQ BACU016412/1-316 --------SR NGHDACRELV GLFFTHDQSL TIYEYRQFGK NR-------- 351 400 ENSBTAP00000046639/1-548 KNIYCHQRGR RKGKQYRLAD LYVGANLTFL SSDHPRLPES VKENTVLTLR ENSP00000386959/1-557 KSIYSHQCGR RKGKQYRLGD FYVGATLTFL SSDHLSLPES IKENTLLKLR bmy_20667T0/1-530 KNIYCHQHGR RKGKQYQLGD FYIGANLTFL SSDHPRLPES IKENTLLTLR BACU016412/1-316 ---------- ---------- ---------- ---------- ---------- 401 450 ENSBTAP00000046639/1-548 ITNVDWRALD SLKTDSEEH- DDVTSEEAND RKILKAIQDL LKEQLRRRGV ENSP00000386959/1-557 ITNIDQIALD SLKTASMEQE DDIIIQETND RLVFKAIQDV LKEKLHKRGV bmy_20667T0/1-530 ITNIDQRALD SLKTDSVEH- DDVTNEEAND RLVFKAIQDV LKEQLCKRGV BACU016412/1-316 ---------- ---TDSVEH- DDVTNEEAND RLVFKAIQDV LKEQLCKRGV 451 500 ENSBTAP00000046639/1-548 RILTGLGKHL QQLDKEGNGL LDKADFKQAL KLFRLEVSEN DFESFWLILN ENSP00000386959/1-557 RILTGLGKYF QQLDKEGNGL LDKADFKQAL KVFHLEVSEK DFESAWLILN bmy_20667T0/1-530 CILTGLRKYL QQLDKEGNGL LDKADFKQAL KVFHLEVSEN DFESLWLILN BACU016412/1-316 CILTGLRKYL QQLDKEGNGL LDKADFKQAL KVFHLEVSEN DFESLWLILN 501 550 ENSBTAP00000046639/1-548 SSGNGRADYG EFKRAIIGEM NEYRKSFVRK AFMKLDFNKT GSVSIIDIRK ENSP00000386959/1-557 DNGNGKVDYG EFKRGIIGEM NEYRKSYVRK AFMKLDFNKS GSVPIINIRK bmy_20667T0/1-530 GYGNGKVDYG ELKRAVIGEM NEYRKSFVQK AFMKLDFNKT GSASVIDIRK BACU016412/1-316 GYGNGKVDYG EFKRAVIGEM NEYRKSFVQK AFMKLDFNKT GSAPVIDIRK 551 600 ENSBTAP00000046639/1-548 CYCAKMHPRV ISGHSTEEEI KSSFLETLKD ACSKSDEVSY GEFEDYYEGL ENSP00000386959/1-557 CYCAKKHSQV ISG------- ---------- ---------- ---------- bmy_20667T0/1-530 CYCAKKHPQV ISGHSTEEEI KTSFLETLKD ACSKSDEVSY GEFEDYYEGL BACU016412/1-316 CYCAKKHPQV ISGHSTEEEI KTSFLETLKD ACSKSDEVSY GEFEDYYEGL 601 650 ENSBTAP00000046639/1-548 SIGIVDDEDF VNVL------ ------CTPW GI ENSP00000386959/1-557 ---------- ---------- ---------- -- bmy_20667T0/1-530 SIGIVDDEDF VNILLETGKR SIQKDRCK-- -- BACU016412/1-316 SIGIVDDEDL VNIL------ ------CTPW GI