KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 17:57:48 2014  Check: 00 ..

 Name: ENSP00000369798/1-161     Len:    169  Check:  5447  Weight:  1.00
 Name: ENSBTAP00000046927/1-166  Len:    169  Check:  5640  Weight:  1.00
 Name: bmy_16236T0/1-166         Len:    169  Check:  4975  Weight:  1.00
 Name: BACU001782/1-166          Len:    169  Check:  4975  Weight:  1.00
 Name: ENSTTRP00000013866/1-160  Len:    169  Check:  2207  Weight:  1.00

//


                          1                                                   50
ENSP00000369798/1-161     MLMPVHFLLL LLLLLGGPRT GLPHKFYKAK PIFSCLNTAL SEAEKGQWED 
ENSBTAP00000046927/1-166  MLVPAPFLLV LLLLLGAPQV GLSQRSPKAG SSPSCLHTAL REAEKSQRKD 
bmy_16236T0/1-166         MLIPAHFLLL LLLLLGAPRT GLSQKLYKAE SVFSCLNTAL SEAKKSQLEG 
BACU001782/1-166          MLIPAHFLLL LLLLLGAPRT GLSQKLYKAE SVFSCLNTAL SEAKKSQLEG 
ENSTTRP00000013866/1-160  MLIPAHFLLL LLLLLGAPSP GLSQKLYKAE PIFSCLN--- ---KKSQLED 


                          51                                                 100
ENSP00000369798/1-161     ASLLSKRSFH YLRSRDASSG E-----EEEG KEKKTFPIS- --GARGGARG 
ENSBTAP00000046927/1-166  TSLLIKRTFP ALPRGDP--- EDQEGQEEED TEKRTFPGSV GGGGGGGAGS 
bmy_16236T0/1-166         APLLSKRSFP SLPSQDSLSG EDQEKEEEED KEKRTFPGS- --GGGGGARS 
BACU001782/1-166          APLLSKRSFP SLPSQDSLSG EDQEKEEEED KEKRTFPGS- --GGGGGARS 
ENSTTRP00000013866/1-160  APLLSKRSFP SLPSQDSLSG EDQEKEEEKD KEKRTFPGS- --GGGGGARS 


                          101                                                150
ENSP00000369798/1-161     TRYRYVSQAQ PRGKPRQDTA KSPHRTKFTL SLDVPTNIMN LLFNIAKAKN 
ENSBTAP00000046927/1-166  TRYKYPSQAQ FQGRPSQDKA NSDRRTKVTL SLDVPTNIMN ILFNIAKAKN 
bmy_16236T0/1-166         TRHKYLSQGQ LRRRLYQDKA KSDRRTKFTL SLDVPTNIMN ILFNIAKAKN 
BACU001782/1-166          TRHKYLSQGQ LRRRLYQDKA KSDRRTKFTL SLDVPTNIMN ILFNIAKAKN 
ENSTTRP00000013866/1-160  TRHKYPSQAQ LRRRLYQDKA KSDQRTKFTL SLDVPTNIMN ILFNIAKAKN 


                          151                                                200
ENSP00000369798/1-161     LRAQAAANAH LMAQIGRKK 
ENSBTAP00000046927/1-166  LRAKAAANAH LMAQIGRKK 
bmy_16236T0/1-166         LRAKAAANAH LMAQIGRKK 
BACU001782/1-166          LRAKAAANAH LMAQIGRKK 
ENSTTRP00000013866/1-160  LRAKAAANAH LMAQIGRKK